Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.693.v1.A.nonSL13-1

Possible name(s)

RPS3A

Gene model

KH2012:KH.C2.693

Location

KhC2 [2,684,336 / 2,688,009]

Sequences

Amino acid sequence

Length: 289

>KH.C2.693.v1.A.nonSL13-1
FGNTDNESTALETKSGLFSTQCRMAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPA
VFKNRQIGKTLVSRTVGTKIAADGLKGRVFECNQADLHGDESTYRKMKLIVEDVQGKHCL
TNFHGMSLTRDKLCSMVKKWQTLIEASCDVSTTDGYKVRMFCIGFTHRRSNQIKKTSYAQ
HMQVINIRAKMIEIMTREVNLGNLRELVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKV
LKKPKLDLGRLMEMHGEGSAKTGQSKSDTGSKVERSGGDSYEPPVQDSV

Nucleotide sequence

Length: 1,324

>KH2012:KH.C2.693.v1.A.nonSL13-1
GAAAAATAATTCGGTAACACTGATAACGAAAGCACTGCGCTCGAGACTAAATCCGGTCTC
TTTTCAACACAGTGCAGGATGGCCGTGGGTAAAAATAAACGCCTGACCAAAGGGGGCAAA
AAGGGTGGAAAAAAGAAGATCGTCGACCCATTCTCCAAGAAGGATTGGTATGATGTAAAG
GCTCCAGCCGTGTTCAAAAACCGTCAAATCGGTAAAACTTTGGTGTCAAGAACCGTTGGA
ACAAAAATTGCAGCTGATGGTTTAAAAGGCCGAGTCTTTGAGTGCAATCAGGCTGATTTG
CATGGCGACGAATCAACTTATCGAAAGATGAAGTTGATTGTTGAAGATGTTCAAGGCAAA
CATTGTCTCACCAACTTCCATGGCATGAGTCTCACCAGGGACAAGTTATGCTCAATGGTA
AAAAAGTGGCAAACATTGATCGAAGCATCATGTGATGTATCAACCACTGACGGATACAAG
GTCCGTATGTTCTGCATTGGATTCACTCACAGGAGAAGCAATCAGATCAAAAAAACATCT
TACGCCCAACACATGCAGGTGATTAACATCCGAGCCAAGATGATCGAAATCATGACACGA
GAGGTGAACCTCGGTAACCTTCGTGAGCTCGTGAACAAACTCATCCCTGACTCCATTGCT
AAGGATATTGAGAAGGCTTGCCAAGGCATTTACCCTCTTCATGATGTTCATATAAGAAAG
GTTAAGGTGCTGAAGAAGCCAAAGCTTGACCTTGGTCGATTGATGGAGATGCATGGTGAA
GGAAGTGCCAAAACTGGCCAATCCAAGTCCGACACTGGATCCAAGGTGGAACGCTCTGGC
GGTGACAGTTATGAACCACCAGTCCAAGATTCCGTTTAAATAATAAAATCGGAAAACAAG
TTTATGAGTGTAGTTGGTTGTTGTTACGCGGTAGCTTACCAGTTGCTCAAAAGAGTTTGG
TGAAGTAGTGTAGACTGAATTATTCATTTATTGATATAATGTAGAAGTCTTGTTGTGTTA
CTATGTGTCGATAGATGTTATGCTCTTGCTGTTCTAAGTGAATTTTGGTTACATATATCC
ATCTGTGGGTAGAATACGCTTGACATGCACTATTTTAAATGGTTAAAGACTAAACCCCTC
AATAAGTTTTATTCGAGTATTCCATGGGTTGAATAACGTATTGTTGCTATCAAATGATAT
ACCGCACATTGAATTGCACATCAATTGATTTGGGGTTTGGTCAACTTAAAGTGAGCGAAA
TTTGACGGTGTTTTTTAATGTTGGTCAATCTGGACGGGAGATGTCGCTAGTGGGTCAAAA
AAAT

InterProScan

Hamap	Ribosomal_S1/3_euk (IPR027500) - T[24-289] 39.413
Pfam	Ribosomal_S3Ae (IPR001593) - T[39-244] 1.1E-95
SMART	Ribosomal_S3Ae (IPR001593) - T[39-244] 3.1E-133

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS3A_HUMAN	74.06 %	396	1.61E-140