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TRANSCRIPT CARD

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  1. Region 'REG00001300' > 
  2. Transcript 'KH2012:KH.C2.693.v1....' > 
  3. Molecular Tool 'Ci-IkappaB-MO (Kawai et al. 2005)' > 
  4. Transcript 'KH2012:KH.C7.510.v1....' > 
  5. Transcript 'KH2012:KH.C2.693.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.693.v1.A.nonSL14-1

Possible name(s)

RPS3A

Gene model

KH2012:KH.C2.693

Location

KhC2 [2,684,401 / 2,688,009]

Sequences

Amino acid sequence

Length: 270

>KH.C2.693.v1.A.nonSL14-1
TQCRMAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAVFKNRQIGKTLVSRTVGTK
IAADGLKGRVFECNQADLHGDESTYRKMKLIVEDVQGKHCLTNFHGMSLTRDKLCSMVKK
WQTLIEASCDVSTTDGYKVRMFCIGFTHRRSNQIKKTSYAQHMQVINIRAKMIEIMTREV
NLGNLRELVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKVLKKPKLDLGRLMEMHGEGS
AKTGQSKSDTGSKVERSGGDSYEPPVQDSV

Nucleotide sequence

Length: 1,259

>KH2012:KH.C2.693.v1.A.nonSL14-1
AACACAGTGCAGGATGGCCGTGGGTAAAAATAAACGCCTGACCAAAGGGGGCAAAAAGGG
TGGAAAAAAGAAGATCGTCGACCCATTCTCCAAGAAGGATTGGTATGATGTAAAGGCTCC
AGCCGTGTTCAAAAACCGTCAAATCGGTAAAACTTTGGTGTCAAGAACCGTTGGAACAAA
AATTGCAGCTGATGGTTTAAAAGGCCGAGTCTTTGAGTGCAATCAGGCTGATTTGCATGG
CGACGAATCAACTTATCGAAAGATGAAGTTGATTGTTGAAGATGTTCAAGGCAAACATTG
TCTCACCAACTTCCATGGCATGAGTCTCACCAGGGACAAGTTATGCTCAATGGTAAAAAA
GTGGCAAACATTGATCGAAGCATCATGTGATGTATCAACCACTGACGGATACAAGGTCCG
TATGTTCTGCATTGGATTCACTCACAGGAGAAGCAATCAGATCAAAAAAACATCTTACGC
CCAACACATGCAGGTGATTAACATCCGAGCCAAGATGATCGAAATCATGACACGAGAGGT
GAACCTCGGTAACCTTCGTGAGCTCGTGAACAAACTCATCCCTGACTCCATTGCTAAGGA
TATTGAGAAGGCTTGCCAAGGCATTTACCCTCTTCATGATGTTCATATAAGAAAGGTTAA
GGTGCTGAAGAAGCCAAAGCTTGACCTTGGTCGATTGATGGAGATGCATGGTGAAGGAAG
TGCCAAAACTGGCCAATCCAAGTCCGACACTGGATCCAAGGTGGAACGCTCTGGCGGTGA
CAGTTATGAACCACCAGTCCAAGATTCCGTTTAAATAATAAAATCGGAAAACAAGTTTAT
GAGTGTAGTTGGTTGTTGTTACGCGGTAGCTTACCAGTTGCTCAAAAGAGTTTGGTGAAG
TAGTGTAGACTGAATTATTCATTTATTGATATAATGTAGAAGTCTTGTTGTGTTACTATG
TGTCGATAGATGTTATGCTCTTGCTGTTCTAAGTGAATTTTGGTTACATATATCCATCTG
TGGGTAGAATACGCTTGACATGCACTATTTTAAATGGTTAAAGACTAAACCCCTCAATAA
GTTTTATTCGAGTATTCCATGGGTTGAATAACGTATTGTTGCTATCAAATGATATACCGC
ACATTGAATTGCACATCAATTGATTTGGGGTTTGGTCAACTTAAAGTGAGCGAAATTTGA
CGGTGTTTTTTAATGTTGGTCAATCTGGACGGGAGATGTCGCTAGTGGGTCAAAAAAAT

InterProScan

Hamap
Ribosomal_S1/3_euk (IPR027500) - T[5-270] 39.413
SMART
Ribosomal_S3Ae (IPR001593) - T[20-225] 3.1E-133
Pfam
Ribosomal_S3Ae (IPR001593) - T[20-225] 9.1E-96

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS3A_HUMAN 74.06 % 395 1.7E-140