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TRANSCRIPT CARD

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  1. Region 'REG00001300'
  2. Transcript 'KH2012:KH.C2.693.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.693.v1.A.nonSL17-1

Possible name(s)

RPS3A

Location

KhC2 [2,684,386 / 2,688,009]

Sequences

Amino acid sequence

Length: 275

>KH.C2.693.v1.A.nonSL17-1
SGLFSTQCRMAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAVFKNRQIGKTLVSR
TVGTKIAADGLKGRVFECNQADLHGDESTYRKMKLIVEDVQGKHCLTNFHGMSLTRDKLC
SMVKKWQTLIEASCDVSTTDGYKVRMFCIGFTHRRSNQIKKTSYAQHMQVINIRAKMIEI
MTREVNLGNLRELVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKVLKKPKLDLGRLMEM
HGEGSAKTGQSKSDTGSKVERSGGDSYEPPVQDSV

Nucleotide sequence

Length: 1,274

>KH2012:KH.C2.693.v1.A.nonSL17-1
ATCCGGTCTCTTTTCAACACAGTGCAGGATGGCCGTGGGTAAAAATAAACGCCTGACCAA
AGGGGGCAAAAAGGGTGGAAAAAAGAAGATCGTCGACCCATTCTCCAAGAAGGATTGGTA
TGATGTAAAGGCTCCAGCCGTGTTCAAAAACCGTCAAATCGGTAAAACTTTGGTGTCAAG
AACCGTTGGAACAAAAATTGCAGCTGATGGTTTAAAAGGCCGAGTCTTTGAGTGCAATCA
GGCTGATTTGCATGGCGACGAATCAACTTATCGAAAGATGAAGTTGATTGTTGAAGATGT
TCAAGGCAAACATTGTCTCACCAACTTCCATGGCATGAGTCTCACCAGGGACAAGTTATG
CTCAATGGTAAAAAAGTGGCAAACATTGATCGAAGCATCATGTGATGTATCAACCACTGA
CGGATACAAGGTCCGTATGTTCTGCATTGGATTCACTCACAGGAGAAGCAATCAGATCAA
AAAAACATCTTACGCCCAACACATGCAGGTGATTAACATCCGAGCCAAGATGATCGAAAT
CATGACACGAGAGGTGAACCTCGGTAACCTTCGTGAGCTCGTGAACAAACTCATCCCTGA
CTCCATTGCTAAGGATATTGAGAAGGCTTGCCAAGGCATTTACCCTCTTCATGATGTTCA
TATAAGAAAGGTTAAGGTGCTGAAGAAGCCAAAGCTTGACCTTGGTCGATTGATGGAGAT
GCATGGTGAAGGAAGTGCCAAAACTGGCCAATCCAAGTCCGACACTGGATCCAAGGTGGA
ACGCTCTGGCGGTGACAGTTATGAACCACCAGTCCAAGATTCCGTTTAAATAATAAAATC
GGAAAACAAGTTTATGAGTGTAGTTGGTTGTTGTTACGCGGTAGCTTACCAGTTGCTCAA
AAGAGTTTGGTGAAGTAGTGTAGACTGAATTATTCATTTATTGATATAATGTAGAAGTCT
TGTTGTGTTACTATGTGTCGATAGATGTTATGCTCTTGCTGTTCTAAGTGAATTTTGGTT
ACATATATCCATCTGTGGGTAGAATACGCTTGACATGCACTATTTTAAATGGTTAAAGAC
TAAACCCCTCAATAAGTTTTATTCGAGTATTCCATGGGTTGAATAACGTATTGTTGCTAT
CAAATGATATACCGCACATTGAATTGCACATCAATTGATTTGGGGTTTGGTCAACTTAAA
GTGAGCGAAATTTGACGGTGTTTTTTAATGTTGGTCAATCTGGACGGGAGATGTCGCTAG
TGGGTCAAAAAAAT

InterProScan

Hamap
Ribosomal_S1/3_euk (IPR027500) - T[10-275] 39.413
SMART
Ribosomal_S3Ae (IPR001593) - T[25-230] 3.1E-133
Pfam
Ribosomal_S3Ae (IPR001593) - T[25-230] 9.7E-96

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS3A_HUMAN 74.06 % 395 1.78E-140