Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.693.v1.A.nonSL19-1

Possible name(s)

RPS3A

Gene model

KH2012:KH.C2.693

Location

KhC2 [2,684,404 / 2,688,009]

Sequences

Amino acid sequence

Length: 269

>KH.C2.693.v1.A.nonSL19-1
QCRMAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAVFKNRQIGKTLVSRTVGTKI
AADGLKGRVFECNQADLHGDESTYRKMKLIVEDVQGKHCLTNFHGMSLTRDKLCSMVKKW
QTLIEASCDVSTTDGYKVRMFCIGFTHRRSNQIKKTSYAQHMQVINIRAKMIEIMTREVN
LGNLRELVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKVLKKPKLDLGRLMEMHGEGSA
KTGQSKSDTGSKVERSGGDSYEPPVQDSV

Nucleotide sequence

Length: 1,256

>KH2012:KH.C2.693.v1.A.nonSL19-1
ACAGTGCAGGATGGCCGTGGGTAAAAATAAACGCCTGACCAAAGGGGGCAAAAAGGGTGG
AAAAAAGAAGATCGTCGACCCATTCTCCAAGAAGGATTGGTATGATGTAAAGGCTCCAGC
CGTGTTCAAAAACCGTCAAATCGGTAAAACTTTGGTGTCAAGAACCGTTGGAACAAAAAT
TGCAGCTGATGGTTTAAAAGGCCGAGTCTTTGAGTGCAATCAGGCTGATTTGCATGGCGA
CGAATCAACTTATCGAAAGATGAAGTTGATTGTTGAAGATGTTCAAGGCAAACATTGTCT
CACCAACTTCCATGGCATGAGTCTCACCAGGGACAAGTTATGCTCAATGGTAAAAAAGTG
GCAAACATTGATCGAAGCATCATGTGATGTATCAACCACTGACGGATACAAGGTCCGTAT
GTTCTGCATTGGATTCACTCACAGGAGAAGCAATCAGATCAAAAAAACATCTTACGCCCA
ACACATGCAGGTGATTAACATCCGAGCCAAGATGATCGAAATCATGACACGAGAGGTGAA
CCTCGGTAACCTTCGTGAGCTCGTGAACAAACTCATCCCTGACTCCATTGCTAAGGATAT
TGAGAAGGCTTGCCAAGGCATTTACCCTCTTCATGATGTTCATATAAGAAAGGTTAAGGT
GCTGAAGAAGCCAAAGCTTGACCTTGGTCGATTGATGGAGATGCATGGTGAAGGAAGTGC
CAAAACTGGCCAATCCAAGTCCGACACTGGATCCAAGGTGGAACGCTCTGGCGGTGACAG
TTATGAACCACCAGTCCAAGATTCCGTTTAAATAATAAAATCGGAAAACAAGTTTATGAG
TGTAGTTGGTTGTTGTTACGCGGTAGCTTACCAGTTGCTCAAAAGAGTTTGGTGAAGTAG
TGTAGACTGAATTATTCATTTATTGATATAATGTAGAAGTCTTGTTGTGTTACTATGTGT
CGATAGATGTTATGCTCTTGCTGTTCTAAGTGAATTTTGGTTACATATATCCATCTGTGG
GTAGAATACGCTTGACATGCACTATTTTAAATGGTTAAAGACTAAACCCCTCAATAAGTT
TTATTCGAGTATTCCATGGGTTGAATAACGTATTGTTGCTATCAAATGATATACCGCACA
TTGAATTGCACATCAATTGATTTGGGGTTTGGTCAACTTAAAGTGAGCGAAATTTGACGG
TGTTTTTTAATGTTGGTCAATCTGGACGGGAGATGTCGCTAGTGGGTCAAAAAAAT

InterProScan

Hamap	Ribosomal_S1/3_euk (IPR027500) - T[4-269] 39.413
SMART	Ribosomal_S3Ae (IPR001593) - T[19-224] 3.1E-133
Pfam	Ribosomal_S3Ae (IPR001593) - T[19-224] 9.0E-96

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS3A_HUMAN	74.06 %	395	1.52E-140