Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.693.v1.A.nonSL20-1

Possible name(s)

RPS3A

Gene model

KH2012:KH.C2.693

Location

KhC2 [2,684,381 / 2,688,009]

Sequences

Amino acid sequence

Length: 277

>KH.C2.693.v1.A.nonSL20-1
TKSGLFSTQCRMAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAVFKNRQIGKTLV
SRTVGTKIAADGLKGRVFECNQADLHGDESTYRKMKLIVEDVQGKHCLTNFHGMSLTRDK
LCSMVKKWQTLIEASCDVSTTDGYKVRMFCIGFTHRRSNQIKKTSYAQHMQVINIRAKMI
EIMTREVNLGNLRELVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKVLKKPKLDLGRLM
EMHGEGSAKTGQSKSDTGSKVERSGGDSYEPPVQDSV

Nucleotide sequence

Length: 1,279

>KH2012:KH.C2.693.v1.A.nonSL20-1
ACTAAATCCGGTCTCTTTTCAACACAGTGCAGGATGGCCGTGGGTAAAAATAAACGCCTG
ACCAAAGGGGGCAAAAAGGGTGGAAAAAAGAAGATCGTCGACCCATTCTCCAAGAAGGAT
TGGTATGATGTAAAGGCTCCAGCCGTGTTCAAAAACCGTCAAATCGGTAAAACTTTGGTG
TCAAGAACCGTTGGAACAAAAATTGCAGCTGATGGTTTAAAAGGCCGAGTCTTTGAGTGC
AATCAGGCTGATTTGCATGGCGACGAATCAACTTATCGAAAGATGAAGTTGATTGTTGAA
GATGTTCAAGGCAAACATTGTCTCACCAACTTCCATGGCATGAGTCTCACCAGGGACAAG
TTATGCTCAATGGTAAAAAAGTGGCAAACATTGATCGAAGCATCATGTGATGTATCAACC
ACTGACGGATACAAGGTCCGTATGTTCTGCATTGGATTCACTCACAGGAGAAGCAATCAG
ATCAAAAAAACATCTTACGCCCAACACATGCAGGTGATTAACATCCGAGCCAAGATGATC
GAAATCATGACACGAGAGGTGAACCTCGGTAACCTTCGTGAGCTCGTGAACAAACTCATC
CCTGACTCCATTGCTAAGGATATTGAGAAGGCTTGCCAAGGCATTTACCCTCTTCATGAT
GTTCATATAAGAAAGGTTAAGGTGCTGAAGAAGCCAAAGCTTGACCTTGGTCGATTGATG
GAGATGCATGGTGAAGGAAGTGCCAAAACTGGCCAATCCAAGTCCGACACTGGATCCAAG
GTGGAACGCTCTGGCGGTGACAGTTATGAACCACCAGTCCAAGATTCCGTTTAAATAATA
AAATCGGAAAACAAGTTTATGAGTGTAGTTGGTTGTTGTTACGCGGTAGCTTACCAGTTG
CTCAAAAGAGTTTGGTGAAGTAGTGTAGACTGAATTATTCATTTATTGATATAATGTAGA
AGTCTTGTTGTGTTACTATGTGTCGATAGATGTTATGCTCTTGCTGTTCTAAGTGAATTT
TGGTTACATATATCCATCTGTGGGTAGAATACGCTTGACATGCACTATTTTAAATGGTTA
AAGACTAAACCCCTCAATAAGTTTTATTCGAGTATTCCATGGGTTGAATAACGTATTGTT
GCTATCAAATGATATACCGCACATTGAATTGCACATCAATTGATTTGGGGTTTGGTCAAC
TTAAAGTGAGCGAAATTTGACGGTGTTTTTTAATGTTGGTCAATCTGGACGGGAGATGTC
GCTAGTGGGTCAAAAAAAT

InterProScan

Hamap	Ribosomal_S1/3_euk (IPR027500) - T[12-277] 39.413
SMART	Ribosomal_S3Ae (IPR001593) - T[27-232] 3.1E-133
Pfam	Ribosomal_S3Ae (IPR001593) - T[27-232] 9.9E-96

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS3A_HUMAN	74.06 %	395	1.49E-140