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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...'
  2. Region 'REG00001123'
  3. Transcript 'KH2012:KH.C2.693.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.693.v1.A.nonSL2-1

Possible name(s)

RPS3A

Location

KhC2 [2,684,395 / 2,688,009]

Sequences

Amino acid sequence

Length: 272

>KH.C2.693.v1.A.nonSL2-1
FSTQCRMAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAVFKNRQIGKTLVSRTVG
TKIAADGLKGRVFECNQADLHGDESTYRKMKLIVEDVQGKHCLTNFHGMSLTRDKLCSMV
KKWQTLIEASCDVSTTDGYKVRMFCIGFTHRRSNQIKKTSYAQHMQVINIRAKMIEIMTR
EVNLGNLRELVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKVLKKPKLDLGRLMEMHGE
GSAKTGQSKSDTGSKVERSGGDSYEPPVQDSV

Nucleotide sequence

Length: 1,265

>KH2012:KH.C2.693.v1.A.nonSL2-1
CTTTTCAACACAGTGCAGGATGGCCGTGGGTAAAAATAAACGCCTGACCAAAGGGGGCAA
AAAGGGTGGAAAAAAGAAGATCGTCGACCCATTCTCCAAGAAGGATTGGTATGATGTAAA
GGCTCCAGCCGTGTTCAAAAACCGTCAAATCGGTAAAACTTTGGTGTCAAGAACCGTTGG
AACAAAAATTGCAGCTGATGGTTTAAAAGGCCGAGTCTTTGAGTGCAATCAGGCTGATTT
GCATGGCGACGAATCAACTTATCGAAAGATGAAGTTGATTGTTGAAGATGTTCAAGGCAA
ACATTGTCTCACCAACTTCCATGGCATGAGTCTCACCAGGGACAAGTTATGCTCAATGGT
AAAAAAGTGGCAAACATTGATCGAAGCATCATGTGATGTATCAACCACTGACGGATACAA
GGTCCGTATGTTCTGCATTGGATTCACTCACAGGAGAAGCAATCAGATCAAAAAAACATC
TTACGCCCAACACATGCAGGTGATTAACATCCGAGCCAAGATGATCGAAATCATGACACG
AGAGGTGAACCTCGGTAACCTTCGTGAGCTCGTGAACAAACTCATCCCTGACTCCATTGC
TAAGGATATTGAGAAGGCTTGCCAAGGCATTTACCCTCTTCATGATGTTCATATAAGAAA
GGTTAAGGTGCTGAAGAAGCCAAAGCTTGACCTTGGTCGATTGATGGAGATGCATGGTGA
AGGAAGTGCCAAAACTGGCCAATCCAAGTCCGACACTGGATCCAAGGTGGAACGCTCTGG
CGGTGACAGTTATGAACCACCAGTCCAAGATTCCGTTTAAATAATAAAATCGGAAAACAA
GTTTATGAGTGTAGTTGGTTGTTGTTACGCGGTAGCTTACCAGTTGCTCAAAAGAGTTTG
GTGAAGTAGTGTAGACTGAATTATTCATTTATTGATATAATGTAGAAGTCTTGTTGTGTT
ACTATGTGTCGATAGATGTTATGCTCTTGCTGTTCTAAGTGAATTTTGGTTACATATATC
CATCTGTGGGTAGAATACGCTTGACATGCACTATTTTAAATGGTTAAAGACTAAACCCCT
CAATAAGTTTTATTCGAGTATTCCATGGGTTGAATAACGTATTGTTGCTATCAAATGATA
TACCGCACATTGAATTGCACATCAATTGATTTGGGGTTTGGTCAACTTAAAGTGAGCGAA
ATTTGACGGTGTTTTTTAATGTTGGTCAATCTGGACGGGAGATGTCGCTAGTGGGTCAAA
AAAAT

InterProScan

Hamap
Ribosomal_S1/3_euk (IPR027500) - T[7-272] 39.413
SMART
Ribosomal_S3Ae (IPR001593) - T[22-227] 3.1E-133
Pfam
Ribosomal_S3Ae (IPR001593) - T[22-227] 9.3E-96

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS3A_HUMAN 74.06 % 395 1.34E-140