Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.693.v1.A.nonSL24-1

Possible name(s)

RPS3A

Gene model

KH2012:KH.C2.693

Location

KhC2 [2,684,429 / 2,688,009]

Sequences

Amino acid sequence

Length: 261

>KH.C2.693.v1.A.nonSL24-1
NKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAVFKNRQIGKTLVSRTVGTKIAADGLKGR
VFECNQADLHGDESTYRKMKLIVEDVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIEASC
DVSTTDGYKVRMFCIGFTHRRSNQIKKTSYAQHMQVINIRAKMIEIMTREVNLGNLRELV
NKLIPDSIAKDIEKACQGIYPLHDVHIRKVKVLKKPKLDLGRLMEMHGEGSAKTGQSKSD
TGSKVERSGGDSYEPPVQDSV

Nucleotide sequence

Length: 1,231

>KH2012:KH.C2.693.v1.A.nonSL24-1
AATAAACGCCTGACCAAAGGGGGCAAAAAGGGTGGAAAAAAGAAGATCGTCGACCCATTC
TCCAAGAAGGATTGGTATGATGTAAAGGCTCCAGCCGTGTTCAAAAACCGTCAAATCGGT
AAAACTTTGGTGTCAAGAACCGTTGGAACAAAAATTGCAGCTGATGGTTTAAAAGGCCGA
GTCTTTGAGTGCAATCAGGCTGATTTGCATGGCGACGAATCAACTTATCGAAAGATGAAG
TTGATTGTTGAAGATGTTCAAGGCAAACATTGTCTCACCAACTTCCATGGCATGAGTCTC
ACCAGGGACAAGTTATGCTCAATGGTAAAAAAGTGGCAAACATTGATCGAAGCATCATGT
GATGTATCAACCACTGACGGATACAAGGTCCGTATGTTCTGCATTGGATTCACTCACAGG
AGAAGCAATCAGATCAAAAAAACATCTTACGCCCAACACATGCAGGTGATTAACATCCGA
GCCAAGATGATCGAAATCATGACACGAGAGGTGAACCTCGGTAACCTTCGTGAGCTCGTG
AACAAACTCATCCCTGACTCCATTGCTAAGGATATTGAGAAGGCTTGCCAAGGCATTTAC
CCTCTTCATGATGTTCATATAAGAAAGGTTAAGGTGCTGAAGAAGCCAAAGCTTGACCTT
GGTCGATTGATGGAGATGCATGGTGAAGGAAGTGCCAAAACTGGCCAATCCAAGTCCGAC
ACTGGATCCAAGGTGGAACGCTCTGGCGGTGACAGTTATGAACCACCAGTCCAAGATTCC
GTTTAAATAATAAAATCGGAAAACAAGTTTATGAGTGTAGTTGGTTGTTGTTACGCGGTA
GCTTACCAGTTGCTCAAAAGAGTTTGGTGAAGTAGTGTAGACTGAATTATTCATTTATTG
ATATAATGTAGAAGTCTTGTTGTGTTACTATGTGTCGATAGATGTTATGCTCTTGCTGTT
CTAAGTGAATTTTGGTTACATATATCCATCTGTGGGTAGAATACGCTTGACATGCACTAT
TTTAAATGGTTAAAGACTAAACCCCTCAATAAGTTTTATTCGAGTATTCCATGGGTTGAA
TAACGTATTGTTGCTATCAAATGATATACCGCACATTGAATTGCACATCAATTGATTTGG
GGTTTGGTCAACTTAAAGTGAGCGAAATTTGACGGTGTTTTTTAATGTTGGTCAATCTGG
ACGGGAGATGTCGCTAGTGGGTCAAAAAAAT

InterProScan

Hamap	Ribosomal_S1/3_euk (IPR027500) - T[2-261] 37.105
SMART	Ribosomal_S3Ae (IPR001593) - T[11-216] 3.1E-133
Pfam	Ribosomal_S3Ae (IPR001593) - T[11-216] 8.1E-96

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS3A_HUMAN	73.563 %	385	6.35E-137