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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'KH2012:KH.C2.693.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.693.v1.A.nonSL5-1

Possible name(s)

RPS3A

Gene model

KH2012:KH.C2.693

Location

KhC2 [2,684,360 / 2,688,009]

Sequences

Amino acid sequence

Length: 284

>KH.C2.693.v1.A.nonSL5-1
NESTALETKSGLFSTQCRMAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAVFKNR
QIGKTLVSRTVGTKIAADGLKGRVFECNQADLHGDESTYRKMKLIVEDVQGKHCLTNFHG
MSLTRDKLCSMVKKWQTLIEASCDVSTTDGYKVRMFCIGFTHRRSNQIKKTSYAQHMQVI
NIRAKMIEIMTREVNLGNLRELVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKVLKKPK
LDLGRLMEMHGEGSAKTGQSKSDTGSKVERSGGDSYEPPVQDSV

Nucleotide sequence

Length: 1,300

>KH2012:KH.C2.693.v1.A.nonSL5-1
AACGAAAGCACTGCGCTCGAGACTAAATCCGGTCTCTTTTCAACACAGTGCAGGATGGCC
GTGGGTAAAAATAAACGCCTGACCAAAGGGGGCAAAAAGGGTGGAAAAAAGAAGATCGTC
GACCCATTCTCCAAGAAGGATTGGTATGATGTAAAGGCTCCAGCCGTGTTCAAAAACCGT
CAAATCGGTAAAACTTTGGTGTCAAGAACCGTTGGAACAAAAATTGCAGCTGATGGTTTA
AAAGGCCGAGTCTTTGAGTGCAATCAGGCTGATTTGCATGGCGACGAATCAACTTATCGA
AAGATGAAGTTGATTGTTGAAGATGTTCAAGGCAAACATTGTCTCACCAACTTCCATGGC
ATGAGTCTCACCAGGGACAAGTTATGCTCAATGGTAAAAAAGTGGCAAACATTGATCGAA
GCATCATGTGATGTATCAACCACTGACGGATACAAGGTCCGTATGTTCTGCATTGGATTC
ACTCACAGGAGAAGCAATCAGATCAAAAAAACATCTTACGCCCAACACATGCAGGTGATT
AACATCCGAGCCAAGATGATCGAAATCATGACACGAGAGGTGAACCTCGGTAACCTTCGT
GAGCTCGTGAACAAACTCATCCCTGACTCCATTGCTAAGGATATTGAGAAGGCTTGCCAA
GGCATTTACCCTCTTCATGATGTTCATATAAGAAAGGTTAAGGTGCTGAAGAAGCCAAAG
CTTGACCTTGGTCGATTGATGGAGATGCATGGTGAAGGAAGTGCCAAAACTGGCCAATCC
AAGTCCGACACTGGATCCAAGGTGGAACGCTCTGGCGGTGACAGTTATGAACCACCAGTC
CAAGATTCCGTTTAAATAATAAAATCGGAAAACAAGTTTATGAGTGTAGTTGGTTGTTGT
TACGCGGTAGCTTACCAGTTGCTCAAAAGAGTTTGGTGAAGTAGTGTAGACTGAATTATT
CATTTATTGATATAATGTAGAAGTCTTGTTGTGTTACTATGTGTCGATAGATGTTATGCT
CTTGCTGTTCTAAGTGAATTTTGGTTACATATATCCATCTGTGGGTAGAATACGCTTGAC
ATGCACTATTTTAAATGGTTAAAGACTAAACCCCTCAATAAGTTTTATTCGAGTATTCCA
TGGGTTGAATAACGTATTGTTGCTATCAAATGATATACCGCACATTGAATTGCACATCAA
TTGATTTGGGGTTTGGTCAACTTAAAGTGAGCGAAATTTGACGGTGTTTTTTAATGTTGG
TCAATCTGGACGGGAGATGTCGCTAGTGGGTCAAAAAAAT

InterProScan

Hamap
Ribosomal_S1/3_euk (IPR027500) - T[19-284] 39.413
Pfam
Ribosomal_S3Ae (IPR001593) - T[34-239] 1.1E-95
SMART
Ribosomal_S3Ae (IPR001593) - T[34-239] 3.1E-133

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS3A_HUMAN 74.06 % 396 1.19E-140