- Clone 'cieg002n01' >
- Transcript 'KH2012:KH.C1.717.v1....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C2.728.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.728.v1.A.nonSL4-1
Possible name(s)
DDX27; DDX47; DDX56
Gene model
Location
KhC2 [5,434,373 / 5,439,178]
Amino acid sequence
Length: 587
>KH.C2.728.v1.A.nonSL4-1
AFKKLFLLVVCFASQNKMTEDDAATQDKVEFHEMGLDDRILKAIAEAGWASPTLIQEKAI
PLAINGKDILSRARTGSGKTAAYAVPIIQQLLNLKNTTQEDEYEQEVRGLVLVPSRELSG
QAYNMMQQLTTSCSRDVTSIDVSMEGDPNLLKPLLAVKPDIVVGTPSRVLAHVRAGNLTL
ASVRWLVLDEADLLFSFGYEDDLKILLKHLPSSYQSFLMSATLSEDVEALKKLVLNNPVT
LNLSEEELPMTDKLTQYHVFCESEDDKYLLIYALNKLKLVRGKSLLFVNTINKCYRLKLF
LEQFSIFCCVLNSELPVSTRCHVVQQYNEGLYDYIIATDESAVVASTVSETAPEIKKTGK
HKKKKLTKAKEYGVSRGIDFQNVSNVINFDFPPTVGSYIHRVGRTARGDKSGTALSFVVS
EEMELLSQAQARLSSNADDQVMKPYQFKMDEIEGFRYRCKDAIRAVTKRAIHDARVKELR
REMLNSAKLKTYFEENPYDLQVLRHDAASRPMKVKKHMKNVPEYLIPPTLKGLYSGVSTR
ASQHQPPPSHDMKPRKRSSVRVMGKPNPKYKKKLEDPLKSFKFVKKS
Nucleotide sequence
Length: 2,023
>KH2012:KH.C2.728.v1.A.nonSL4-1
GCATTTAAGAAATTGTTTTTATTAGTAGTTTGTTTTGCTTCACAAAATAAAATGACAGAA
GATGATGCAGCAACACAAGACAAGGTGGAATTTCACGAAATGGGCCTTGACGATCGTATT
TTAAAGGCAATAGCAGAGGCAGGGTGGGCAAGTCCAACATTAATTCAGGAGAAAGCAATT
CCACTTGCAATAAATGGGAAGGATATTTTATCTCGTGCTCGAACCGGCTCGGGCAAAACA
GCGGCTTATGCTGTTCCTATAATTCAACAATTACTGAACCTGAAAAACACAACACAGGAA
GATGAATACGAGCAAGAAGTTCGTGGATTGGTTCTTGTCCCATCACGTGAATTGTCAGGT
CAAGCATACAACATGATGCAACAGCTCACCACATCATGCTCACGTGATGTCACCAGCATC
GATGTTTCAATGGAAGGAGACCCAAATCTTTTGAAGCCTCTGCTTGCTGTAAAACCAGAC
ATAGTAGTTGGTACACCCAGTCGTGTGTTGGCCCATGTTCGAGCTGGTAACCTTACACTT
GCTTCAGTACGGTGGTTGGTTCTTGATGAAGCTGATCTTCTTTTTTCATTTGGTTACGAA
GACGACTTAAAAATTCTTCTTAAACACTTGCCAAGTAGTTACCAATCTTTCTTAATGTCA
GCTACACTAAGTGAGGATGTTGAAGCATTGAAGAAACTTGTGTTGAACAACCCAGTTACA
TTAAATTTATCTGAAGAAGAACTTCCTATGACTGACAAGTTAACTCAATATCATGTATTC
TGTGAATCTGAGGACGATAAATATCTTCTAATATACGCACTCAACAAACTTAAACTGGTC
AGAGGAAAATCCCTACTGTTTGTCAACACTATTAATAAATGCTACAGGTTGAAATTATTT
TTGGAACAATTTTCAATATTTTGTTGCGTTTTGAACTCAGAGTTACCTGTCAGTACAAGG
TGTCATGTGGTACAGCAATATAATGAGGGATTATATGATTACATCATTGCTACGGATGAA
AGTGCTGTTGTTGCATCAACTGTGTCAGAAACTGCTCCAGAAATAAAGAAAACTGGAAAA
CACAAGAAAAAGAAATTGACAAAAGCAAAGGAATACGGAGTTTCGCGAGGCATTGATTTT
CAGAATGTTTCAAACGTCATAAATTTTGACTTCCCGCCAACTGTTGGTTCATACATCCAC
AGAGTGGGACGAACGGCAAGAGGGGATAAATCCGGCACCGCACTTTCATTTGTTGTTTCG
GAGGAGATGGAGTTATTGTCACAAGCACAAGCCCGGTTGTCTAGCAACGCAGATGATCAG
GTCATGAAACCTTACCAGTTTAAAATGGATGAGATTGAGGGTTTTAGATATCGGTGCAAG
GATGCGATACGAGCGGTGACGAAGAGAGCAATACATGATGCGAGGGTGAAGGAGTTAAGA
CGAGAGATGTTGAACTCTGCAAAACTGAAAACCTATTTTGAGGAAAACCCTTACGACCTC
CAAGTATTGCGTCACGATGCAGCTTCCCGGCCAATGAAAGTGAAGAAACACATGAAGAAT
GTTCCGGAATATTTAATCCCACCCACGCTGAAAGGTTTATACAGCGGGGTTTCCACCCGT
GCGTCGCAACACCAGCCACCTCCATCACATGATATGAAACCAAGGAAAAGAAGTTCAGTT
CGAGTGATGGGAAAACCTAACCCGAAATATAAGAAGAAACTGGAAGATCCACTGAAAAGT
TTTAAATTTGTAAAGAAATCTTGATTGAAAGCGTTGTATTAAAAGACAGGAGATGAGCGG
AGGACAATAAAATGGAAAATAAATTGTGTTTTTTTTCAAAGTAGGAATAAGTTAAATAGA
GGCAGTGTCACTCCAGTGACAAGACATTTAAACCTGATTAGGTTTGGCAAGATTAAAAAT
AAAACTAAAAGAAAACTGATTTGCACATAATTTTTCAAATATATATATACAATGTGTAAA
GTAAAAATAGTATGTTTGGTACATTAGAACATGAATGCAATAC
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[16-242] 5.56E-53 - T[252-339] 4.35E-29 - T[373-443] 4.35E-29 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[29-57] 10.409 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[48-257] 6.9E-40 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[53-229] 2.7E-38 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[60-241] 25.662 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[253-450] 12.302 |
| CDD |
Helicase_C (IPR001650) - T[253-417] 1.73598E-22 |
| Pfam |
Helicase_C (IPR001650) - T[267-408] 8.3E-30 |
| SMART |
Helicase_C (IPR001650) - T[295-409] 6.1E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 28.986 % | 177 | 1.42E-47 |
| DDX47_HUMAN | 31.507 % | 208 | 5.15E-61 |
| DDX56_HUMAN | 53.61 % | 569 | 0 |