- Transcript 'KH2012:KH.C2.728.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.728.v1.A.nonSL7-1
Possible name(s)
DDX27; DDX47; DDX56
Gene model
Location
KhC2 [5,434,411 / 5,439,178]
Amino acid sequence
Length: 574
>KH.C2.728.v1.A.nonSL7-1
SQNKMTEDDAATQDKVEFHEMGLDDRILKAIAEAGWASPTLIQEKAIPLAINGKDILSRA
RTGSGKTAAYAVPIIQQLLNLKNTTQEDEYEQEVRGLVLVPSRELSGQAYNMMQQLTTSC
SRDVTSIDVSMEGDPNLLKPLLAVKPDIVVGTPSRVLAHVRAGNLTLASVRWLVLDEADL
LFSFGYEDDLKILLKHLPSSYQSFLMSATLSEDVEALKKLVLNNPVTLNLSEEELPMTDK
LTQYHVFCESEDDKYLLIYALNKLKLVRGKSLLFVNTINKCYRLKLFLEQFSIFCCVLNS
ELPVSTRCHVVQQYNEGLYDYIIATDESAVVASTVSETAPEIKKTGKHKKKKLTKAKEYG
VSRGIDFQNVSNVINFDFPPTVGSYIHRVGRTARGDKSGTALSFVVSEEMELLSQAQARL
SSNADDQVMKPYQFKMDEIEGFRYRCKDAIRAVTKRAIHDARVKELRREMLNSAKLKTYF
EENPYDLQVLRHDAASRPMKVKKHMKNVPEYLIPPTLKGLYSGVSTRASQHQPPPSHDMK
PRKRSSVRVMGKPNPKYKKKLEDPLKSFKFVKKS
Nucleotide sequence
Length: 1,985
>KH2012:KH.C2.728.v1.A.nonSL7-1
TTCACAAAATAAAATGACAGAAGATGATGCAGCAACACAAGACAAGGTGGAATTTCACGA
AATGGGCCTTGACGATCGTATTTTAAAGGCAATAGCAGAGGCAGGGTGGGCAAGTCCAAC
ATTAATTCAGGAGAAAGCAATTCCACTTGCAATAAATGGGAAGGATATTTTATCTCGTGC
TCGAACCGGCTCGGGCAAAACAGCGGCTTATGCTGTTCCTATAATTCAACAATTACTGAA
CCTGAAAAACACAACACAGGAAGATGAATACGAGCAAGAAGTTCGTGGATTGGTTCTTGT
CCCATCACGTGAATTGTCAGGTCAAGCATACAACATGATGCAACAGCTCACCACATCATG
CTCACGTGATGTCACCAGCATCGATGTTTCAATGGAAGGAGACCCAAATCTTTTGAAGCC
TCTGCTTGCTGTAAAACCAGACATAGTAGTTGGTACACCCAGTCGTGTGTTGGCCCATGT
TCGAGCTGGTAACCTTACACTTGCTTCAGTACGGTGGTTGGTTCTTGATGAAGCTGATCT
TCTTTTTTCATTTGGTTACGAAGACGACTTAAAAATTCTTCTTAAACACTTGCCAAGTAG
TTACCAATCTTTCTTAATGTCAGCTACACTAAGTGAGGATGTTGAAGCATTGAAGAAACT
TGTGTTGAACAACCCAGTTACATTAAATTTATCTGAAGAAGAACTTCCTATGACTGACAA
GTTAACTCAATATCATGTATTCTGTGAATCTGAGGACGATAAATATCTTCTAATATACGC
ACTCAACAAACTTAAACTGGTCAGAGGAAAATCCCTACTGTTTGTCAACACTATTAATAA
ATGCTACAGGTTGAAATTATTTTTGGAACAATTTTCAATATTTTGTTGCGTTTTGAACTC
AGAGTTACCTGTCAGTACAAGGTGTCATGTGGTACAGCAATATAATGAGGGATTATATGA
TTACATCATTGCTACGGATGAAAGTGCTGTTGTTGCATCAACTGTGTCAGAAACTGCTCC
AGAAATAAAGAAAACTGGAAAACACAAGAAAAAGAAATTGACAAAAGCAAAGGAATACGG
AGTTTCGCGAGGCATTGATTTTCAGAATGTTTCAAACGTCATAAATTTTGACTTCCCGCC
AACTGTTGGTTCATACATCCACAGAGTGGGACGAACGGCAAGAGGGGATAAATCCGGCAC
CGCACTTTCATTTGTTGTTTCGGAGGAGATGGAGTTATTGTCACAAGCACAAGCCCGGTT
GTCTAGCAACGCAGATGATCAGGTCATGAAACCTTACCAGTTTAAAATGGATGAGATTGA
GGGTTTTAGATATCGGTGCAAGGATGCGATACGAGCGGTGACGAAGAGAGCAATACATGA
TGCGAGGGTGAAGGAGTTAAGACGAGAGATGTTGAACTCTGCAAAACTGAAAACCTATTT
TGAGGAAAACCCTTACGACCTCCAAGTATTGCGTCACGATGCAGCTTCCCGGCCAATGAA
AGTGAAGAAACACATGAAGAATGTTCCGGAATATTTAATCCCACCCACGCTGAAAGGTTT
ATACAGCGGGGTTTCCACCCGTGCGTCGCAACACCAGCCACCTCCATCACATGATATGAA
ACCAAGGAAAAGAAGTTCAGTTCGAGTGATGGGAAAACCTAACCCGAAATATAAGAAGAA
ACTGGAAGATCCACTGAAAAGTTTTAAATTTGTAAAGAAATCTTGATTGAAAGCGTTGTA
TTAAAAGACAGGAGATGAGCGGAGGACAATAAAATGGAAAATAAATTGTGTTTTTTTTCA
AAGTAGGAATAAGTTAAATAGAGGCAGTGTCACTCCAGTGACAAGACATTTAAACCTGAT
TAGGTTTGGCAAGATTAAAAATAAAACTAAAAGAAAACTGATTTGCACATAATTTTTCAA
ATATATATATACAATGTGTAAAGTAAAAATAGTATGTTTGGTACATTAGAACATGAATGC
AATAC
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[6-229] 7.99E-53 - T[239-326] 4.13E-29 - T[360-430] 4.13E-29 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[16-44] 10.409 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[35-244] 6.9E-40 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[40-216] 2.6E-38 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[47-228] 25.662 |
| CDD |
Helicase_C (IPR001650) - T[240-404] 1.63366E-22 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[240-437] 12.302 |
| Pfam |
Helicase_C (IPR001650) - T[254-395] 8.0E-30 |
| SMART |
Helicase_C (IPR001650) - T[282-396] 6.1E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 28.986 % | 178 | 7.3E-48 |
| DDX47_HUMAN | 31.667 % | 208 | 6.69E-61 |
| DDX56_HUMAN | 53.61 % | 569 | 0 |