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- Transcript 'KH2012:KH.C2.728.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.728.v1.A.SL2-1
Possible name(s)
DDX27; DDX47; DDX56
Gene model
Location
KhC2 [5,434,382 / 5,439,178]
Amino acid sequence
Length: 584
>KH.C2.728.v1.A.SL2-1
KLFLLVVCFASQNKMTEDDAATQDKVEFHEMGLDDRILKAIAEAGWASPTLIQEKAIPLA
INGKDILSRARTGSGKTAAYAVPIIQQLLNLKNTTQEDEYEQEVRGLVLVPSRELSGQAY
NMMQQLTTSCSRDVTSIDVSMEGDPNLLKPLLAVKPDIVVGTPSRVLAHVRAGNLTLASV
RWLVLDEADLLFSFGYEDDLKILLKHLPSSYQSFLMSATLSEDVEALKKLVLNNPVTLNL
SEEELPMTDKLTQYHVFCESEDDKYLLIYALNKLKLVRGKSLLFVNTINKCYRLKLFLEQ
FSIFCCVLNSELPVSTRCHVVQQYNEGLYDYIIATDESAVVASTVSETAPEIKKTGKHKK
KKLTKAKEYGVSRGIDFQNVSNVINFDFPPTVGSYIHRVGRTARGDKSGTALSFVVSEEM
ELLSQAQARLSSNADDQVMKPYQFKMDEIEGFRYRCKDAIRAVTKRAIHDARVKELRREM
LNSAKLKTYFEENPYDLQVLRHDAASRPMKVKKHMKNVPEYLIPPTLKGLYSGVSTRASQ
HQPPPSHDMKPRKRSSVRVMGKPNPKYKKKLEDPLKSFKFVKKS
Nucleotide sequence
Length: 2,014
>KH2012:KH.C2.728.v1.A.SL2-1
AAATTGTTTTTATTAGTAGTTTGTTTTGCTTCACAAAATAAAATGACAGAAGATGATGCA
GCAACACAAGACAAGGTGGAATTTCACGAAATGGGCCTTGACGATCGTATTTTAAAGGCA
ATAGCAGAGGCAGGGTGGGCAAGTCCAACATTAATTCAGGAGAAAGCAATTCCACTTGCA
ATAAATGGGAAGGATATTTTATCTCGTGCTCGAACCGGCTCGGGCAAAACAGCGGCTTAT
GCTGTTCCTATAATTCAACAATTACTGAACCTGAAAAACACAACACAGGAAGATGAATAC
GAGCAAGAAGTTCGTGGATTGGTTCTTGTCCCATCACGTGAATTGTCAGGTCAAGCATAC
AACATGATGCAACAGCTCACCACATCATGCTCACGTGATGTCACCAGCATCGATGTTTCA
ATGGAAGGAGACCCAAATCTTTTGAAGCCTCTGCTTGCTGTAAAACCAGACATAGTAGTT
GGTACACCCAGTCGTGTGTTGGCCCATGTTCGAGCTGGTAACCTTACACTTGCTTCAGTA
CGGTGGTTGGTTCTTGATGAAGCTGATCTTCTTTTTTCATTTGGTTACGAAGACGACTTA
AAAATTCTTCTTAAACACTTGCCAAGTAGTTACCAATCTTTCTTAATGTCAGCTACACTA
AGTGAGGATGTTGAAGCATTGAAGAAACTTGTGTTGAACAACCCAGTTACATTAAATTTA
TCTGAAGAAGAACTTCCTATGACTGACAAGTTAACTCAATATCATGTATTCTGTGAATCT
GAGGACGATAAATATCTTCTAATATACGCACTCAACAAACTTAAACTGGTCAGAGGAAAA
TCCCTACTGTTTGTCAACACTATTAATAAATGCTACAGGTTGAAATTATTTTTGGAACAA
TTTTCAATATTTTGTTGCGTTTTGAACTCAGAGTTACCTGTCAGTACAAGGTGTCATGTG
GTACAGCAATATAATGAGGGATTATATGATTACATCATTGCTACGGATGAAAGTGCTGTT
GTTGCATCAACTGTGTCAGAAACTGCTCCAGAAATAAAGAAAACTGGAAAACACAAGAAA
AAGAAATTGACAAAAGCAAAGGAATACGGAGTTTCGCGAGGCATTGATTTTCAGAATGTT
TCAAACGTCATAAATTTTGACTTCCCGCCAACTGTTGGTTCATACATCCACAGAGTGGGA
CGAACGGCAAGAGGGGATAAATCCGGCACCGCACTTTCATTTGTTGTTTCGGAGGAGATG
GAGTTATTGTCACAAGCACAAGCCCGGTTGTCTAGCAACGCAGATGATCAGGTCATGAAA
CCTTACCAGTTTAAAATGGATGAGATTGAGGGTTTTAGATATCGGTGCAAGGATGCGATA
CGAGCGGTGACGAAGAGAGCAATACATGATGCGAGGGTGAAGGAGTTAAGACGAGAGATG
TTGAACTCTGCAAAACTGAAAACCTATTTTGAGGAAAACCCTTACGACCTCCAAGTATTG
CGTCACGATGCAGCTTCCCGGCCAATGAAAGTGAAGAAACACATGAAGAATGTTCCGGAA
TATTTAATCCCACCCACGCTGAAAGGTTTATACAGCGGGGTTTCCACCCGTGCGTCGCAA
CACCAGCCACCTCCATCACATGATATGAAACCAAGGAAAAGAAGTTCAGTTCGAGTGATG
GGAAAACCTAACCCGAAATATAAGAAGAAACTGGAAGATCCACTGAAAAGTTTTAAATTT
GTAAAGAAATCTTGATTGAAAGCGTTGTATTAAAAGACAGGAGATGAGCGGAGGACAATA
AAATGGAAAATAAATTGTGTTTTTTTTCAAAGTAGGAATAAGTTAAATAGAGGCAGTGTC
ACTCCAGTGACAAGACATTTAAACCTGATTAGGTTTGGCAAGATTAAAAATAAAACTAAA
AGAAAACTGATTTGCACATAATTTTTCAAATATATATATACAATGTGTAAAGTAAAAATA
GTATGTTTGGTACATTAGAACATGAATGCAATAC
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[13-239] 5.56E-53 - T[249-336] 4.24E-29 - T[370-440] 4.24E-29 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[26-54] 10.409 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[45-254] 6.9E-40 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[50-226] 2.7E-38 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[57-238] 25.662 |
| CDD |
Helicase_C (IPR001650) - T[250-414] 1.80965E-22 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[250-447] 12.302 |
| Pfam |
Helicase_C (IPR001650) - T[264-405] 8.2E-30 |
| SMART |
Helicase_C (IPR001650) - T[292-406] 6.1E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 28.986 % | 177 | 1.52E-47 |
| DDX47_HUMAN | 31.507 % | 208 | 5.37E-61 |
| DDX56_HUMAN | 53.61 % | 570 | 0 |