- Transcript 'KH2012:KH.C2.729.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.729.v2.A.ND1-1
Possible name(s)
ARFGEF1; ARFGEF2; FBXO8
Gene model
Location
KhC2 [2,466,041 / 2,471,076]
Amino acid sequence
Length: 337
>KH.C2.729.v2.A.ND1-1
LKINFFWNSNIMGQQVGRRILGHERNNRYDNSFCNSNQNSKLNVLNRLLKNRHGSFGSST
LNNFVDLDLLPPELGIQILQNLNATDLCLASCVWTDLANDERLWEGLCLSSWGFCSAYRT
WKQQGKSFKRLFLLLDEGSLTFNTEPEWGIRYFVDNHILNDQPEDIAMFIHSTNQLCWKQ
VRIYLRKRQDVFFEIFKRQSFKNQFLPNALRKFFNAVDSPTTQSEYLSSLIEKFSIQFCG
DNPDLGLEPDVVCILCYSLLLLSVDLASPHVKNKMSKREFIRNIRRALEMGNNAAARRPR
EPIDRDFAGHLYDNVYLVGHVAPQRWDDVSRRPVTHQ
Nucleotide sequence
Length: 1,982
>KH2012:KH.C2.729.v2.A.ND1-1
CATTGGTTGCTGCCTTTCTTAGAACAAGTCTGCAAGGCTGGCAATGTAACCTTTGCATGA
AAAAGACAACAGTTGATGAGGTTATAACTCAAAATCAATTTTTTCTGGAATTCAAACATA
ATGGGTCAGCAAGTTGGTAGAAGGATCTTAGGCCACGAAAGAAACAACAGATATGACAAT
TCCTTCTGTAATTCAAACCAGAATTCAAAGCTTAATGTTCTAAATCGGTTGTTGAAGAAC
CGACATGGTAGTTTTGGAAGTTCCACGTTGAATAACTTTGTGGATCTCGATCTTCTGCCT
CCAGAACTGGGAATCCAGATCCTTCAAAATCTCAATGCAACGGATCTTTGTCTTGCATCA
TGTGTGTGGACAGACCTCGCCAATGATGAACGTTTATGGGAAGGGTTGTGTTTATCTTCA
TGGGGATTCTGTAGCGCATATCGAACTTGGAAACAACAAGGAAAGTCTTTTAAGAGATTA
TTTCTTTTACTTGATGAAGGGAGCTTGACATTTAATACGGAACCAGAATGGGGTATTCGG
TACTTTGTCGATAACCACATTCTAAACGACCAACCTGAAGACATCGCTATGTTCATTCAC
TCAACTAATCAACTTTGTTGGAAACAAGTTCGAATTTATTTAAGAAAAAGACAAGATGTT
TTCTTTGAAATATTTAAACGACAAAGTTTCAAAAATCAATTTCTACCAAATGCTCTCAGG
AAGTTTTTCAATGCAGTTGACTCTCCCACCACACAAAGTGAATACCTCAGTTCACTTATT
GAAAAGTTTTCAATTCAGTTTTGTGGAGATAATCCTGATTTAGGGTTGGAGCCAGATGTA
GTTTGCATCCTCTGTTATTCTCTCCTTCTCTTATCTGTGGATCTCGCGAGTCCTCACGTA
AAGAACAAGATGTCGAAGCGAGAGTTCATCCGAAACATCCGGCGAGCATTGGAGATGGGG
AACAATGCTGCAGCCAGGAGACCACGAGAACCAATTGATCGTGACTTTGCCGGCCACTTG
TATGATAATGTGTATCTGGTTGGCCATGTTGCACCACAACGTTGGGACGATGTATCGCGT
AGGCCTGTCACGCACCAATGAGATTCTCAATCTTGACAAATTTGAACTAGATGTAAACAA
TCTTTCCTGCACAAAACACAAATACAATCCAATTGCCAGTCGTACACTGTTTAAATCGGT
GCATAGAACCAAAGTCCACCATTTTTGTCATGTTAAATAATCTCATATTTCTGATAATGG
TTATCTTAGCAGTCTAAATATTTTATTGACAACCCCCATCTGTTATACAGCAGTTAATCT
CGCTTAATATTTAAATGCAGGCTGAATTCTCTTATATCCAACCTATGCACATTGCCCAAT
TTATAGATACTAATTTTTTTATTTGTTTCCTACCATTTGTTCCTCCTTTTAAGTTTCTCT
TGCTTTTTTATTCATTTTCCTTTTTTGCAGTGTTTGCAAAACTTTAAAAATATGTAAGTT
TTGTAAAGTTTCACTATTATTGTTGGTGGACAGCTAAAGTATTCAAGCCATACTGTGTAA
AGCTTAGTATATAATGGTTGAACGACTTTACCAACTAACTTCCATCTGTTACTGACACTA
ACAAAAATCTCTCTGTAATAATAGTAATGTGGATTGTAACATTATTTTTAAAACTGTGAA
ATTAACTGGCTTGAAATGGCCCACTTAATGTGTCTTTATTTTTTGTTTAAATGTAAAACT
AAGTAGTATCTAATATTAGGTTGCTTGCTGTAAGTGGCTTTTGCAACCTAATCCTTTGTA
GGTTGCAACAGTAACTCTATTCTGTTGGTTGGTCTTTTTTACAGAAAAATCAAACAAATG
GAATATGGTAAAAAGTTATCTTCCGTTAACAGTGCTATTCATAAAAGTTTTTGCATGTTG
TTTATGTAATTAAACCATAGCATGGTGAAAATTATGTCAGAATAAAAGAACCAAAAACCA
TG
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[59-132] 1.7E-13 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[64-107] 8.676 |
| ProSiteProfiles |
Sec7_dom (IPR000904) - T[124-318] 22.572 |
| SMART |
Sec7_dom (IPR000904) - T[128-320] 8.5E-27 |
| SUPERFAMILY |
Sec7_dom_sf (IPR035999) - T[134-316] 6.02E-38 |
| Pfam |
Sec7_dom (IPR000904) - T[135-315] 2.2E-27 |
| Gene3D |
Sec7_C_sf (IPR023394) - T[203-316] 9.3E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BIG1_HUMAN | 30.12 % | 87.8 | 7.46E-19 |
| FBX8_HUMAN | 55.914 % | 309 | 1.38E-104 |