Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'AHC0AAA95YP06' > 
  2. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  3. Transcript 'KH2012:KH.C2.140.v1....' > 
  4. Clone 'cicl088p04' > 
  5. Transcript 'KH2012:KH.C2.729.v3....'

Transcript Model

Transcript Id

KH2012:KH.C2.729.v3.A.SL3-1

Possible name(s)

ARFGEF1; ARFGEF2; FBXO8

Gene model

KH2012:KH.C2.729

Location

KhC2 [2,466,041 / 2,468,807]

Sequences

Amino acid sequence

Length: 237

>KH.C2.729.v3.A.SL3-1
KSCLFRLCLSSWGFCSAYRTWKQQGKSFKRLFLLLDEGSLTFNTEPEWGIRYFVDNHILN
DQPEDIAMFIHSTNQLCWKQVRIYLRKRQDVFFEIFKRQSFKNQFLPNALRKFFNAVDSP
TTQSEYLSSLIEKFSIQFCGDNPDLGLEPDVVCILCYSLLLLSVDLASPHVKNKMSKREF
IRNIRRALEMGNNAAARRPREPIDRDFAGHLYDNVYLVGHVAPQRWDDVSRRPVTHQ

Nucleotide sequence

Length: 1,595

>KH2012:KH.C2.729.v3.A.SL3-1
AAAAGTTGTTTGTTTAGGTTGTGTTTATCTTCATGGGGATTCTGTAGCGCATATCGAACT
TGGAAACAACAAGGAAAGTCTTTTAAGAGATTATTTCTTTTACTTGATGAAGGGAGCTTG
ACATTTAATACGGAACCAGAATGGGGTATTCGGTACTTTGTCGATAACCACATTCTAAAC
GACCAACCTGAAGACATCGCTATGTTCATTCACTCAACTAATCAACTTTGTTGGAAACAA
GTTCGAATTTATTTAAGAAAAAGACAAGATGTTTTCTTTGAAATATTTAAACGACAAAGT
TTCAAAAATCAATTTCTACCAAATGCTCTCAGGAAGTTTTTCAATGCAGTTGACTCTCCC
ACCACACAAAGTGAATACCTCAGTTCACTTATTGAAAAGTTTTCAATTCAGTTTTGTGGA
GATAATCCTGATTTAGGGTTGGAGCCAGATGTAGTTTGCATCCTCTGTTATTCTCTCCTT
CTCTTATCTGTGGATCTCGCGAGTCCTCACGTAAAGAACAAGATGTCGAAGCGAGAGTTC
ATCCGAAACATCCGGCGAGCATTGGAGATGGGGAACAATGCTGCAGCCAGGAGACCACGA
GAACCAATTGATCGTGACTTTGCCGGCCACTTGTATGATAATGTGTATCTGGTTGGCCAT
GTTGCACCACAACGTTGGGACGATGTATCGCGTAGGCCTGTCACGCACCAATGAGATTCT
CAATCTTGACAAATTTGAACTAGATGTAAACAATCTTTCCTGCACAAAACACAAATACAA
TCCAATTGCCAGTCGTACACTGTTTAAATCGGTGCATAGAACCAAAGTCCACCATTTTTG
TCATGTTAAATAATCTCATATTTCTGATAATGGTTATCTTAGCAGTCTAAATATTTTATT
GACAACCCCCATCTGTTATACAGCAGTTAATCTCGCTTAATATTTAAATGCAGGCTGAAT
TCTCTTATATCCAACCTATGCACATTGCCCAATTTATAGATACTAATTTTTTTATTTGTT
TCCTACCATTTGTTCCTCCTTTTAAGTTTCTCTTGCTTTTTTATTCATTTTCCTTTTTTG
CAGTGTTTGCAAAACTTTAAAAATATGTAAGTTTTGTAAAGTTTCACTATTATTGTTGGT
GGACAGCTAAAGTATTCAAGCCATACTGTGTAAAGCTTAGTATATAATGGTTGAACGACT
TTACCAACTAACTTCCATCTGTTACTGACACTAACAAAAATCTCTCTGTAATAATAGTAA
TGTGGATTGTAACATTATTTTTAAAACTGTGAAATTAACTGGCTTGAAATGGCCCACTTA
ATGTGTCTTTATTTTTTGTTTAAATGTAAAACTAAGTAGTATCTAATATTAGGTTGCTTG
CTGTAAGTGGCTTTTGCAACCTAATCCTTTGTAGGTTGCAACAGTAACTCTATTCTGTTG
GTTGGTCTTTTTTACAGAAAAATCAAACAAATGGAATATGGTAAAAAGTTATCTTCCGTT
AACAGTGCTATTCATAAAAGTTTTTGCATGTTGTTTATGTAATTAAACCATAGCATGGTG
AAAATTATGTCAGAATAAAAGAACCAAAAACCATG

InterProScan

ProSiteProfiles
Sec7_dom (IPR000904) - T[24-218] 22.572
SMART
Sec7_dom (IPR000904) - T[28-220] 8.5E-27
SUPERFAMILY
Sec7_dom_sf (IPR035999) - T[34-216] 1.96E-38
Pfam
Sec7_dom (IPR000904) - T[35-215] 7.9E-28
Gene3D
Sec7_C_sf (IPR023394) - T[105-216] 4.3E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BIG1_HUMAN 29.73 % 87 1.53E-19
FBX8_HUMAN 54.545 % 241 1.06E-79