Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.77.v1.A.nonSL2-1

Possible name(s)

RPL7; RPL7L1

Gene model

KH2012:KH.C2.77

Location

KhC2 [6,659,848 / 6,663,337]

Sequences

Amino acid sequence

Length: 248

>KH.C2.77.v1.A.nonSL2-1
LVSNMVASKKLPRVPESLLKKRKEYQAQKAKQAQAAILNKKKNKEKRKIIFKRAEQYVKE
YRIKERDGIRLARQARTHNNYYVPDEPKLAFVIRIRGINQVSPKVKKVLQLFRLRQIHNG
VFIKLNKPTLQMLRIAEPYIAWGYPNLKTVRELIYKRGHGKVNKSRIPITDNNIIEDSLG
KKGIICVEDLIHEIFTVGPNFKAAAAFLWPFKLSSPRGGFQKVTNHFVEGGDCGNREDKI
NALVRQMN

Nucleotide sequence

Length: 774

>KH2012:KH.C2.77.v1.A.nonSL2-1
CCTTTTCTAGTTAGCTTGTTAGCAATATGGTGGCCAGTAAGAAGCTCCCAAGGGTACCGG
AGTCCCTCTTGAAAAAGAGGAAGGAGTACCAGGCACAGAAGGCAAAACAAGCACAAGCTG
CTATTCTTAATAAGAAGAAAAACAAGGAGAAGCGAAAGATAATCTTCAAAAGAGCTGAGC
AATATGTGAAGGAATATCGAATTAAGGAAAGAGATGGAATCAGGCTTGCACGCCAAGCAA
GAACACATAATAATTATTATGTTCCTGATGAACCAAAACTCGCATTCGTTATCAGAATCA
GAGGTATCAACCAAGTGAGCCCAAAGGTGAAAAAGGTTCTTCAGCTTTTTAGACTTCGTC
AAATCCACAATGGTGTTTTCATCAAGCTGAACAAACCAACTCTACAGATGTTAAGGATAG
CTGAACCATACATTGCTTGGGGATACCCTAACTTGAAGACCGTTCGTGAATTGATCTACA
AAAGAGGTCATGGAAAGGTCAACAAATCCAGGATTCCAATCACAGATAACAACATCATTG
AAGACTCTCTTGGCAAAAAGGGAATCATCTGCGTTGAAGATTTGATTCACGAAATCTTCA
CTGTTGGCCCCAACTTTAAGGCAGCAGCAGCTTTCTTGTGGCCATTCAAACTATCCTCTC
CCCGTGGTGGCTTCCAGAAGGTGACCAACCACTTTGTTGAGGGTGGTGACTGTGGCAACA
GAGAGGACAAGATAAATGCTCTTGTTCGCCAGATGAATTAAATTCCGCAATCTG

InterProScan

Pfam	Ribosomal_L30_N (IPR012988) - T[14-85] 5.5E-29
TIGRFAM	Ribosomal_L7_euk (IPR005998) - T[15-248] 3.2E-102
SUPERFAMILY	L30_ferredoxin-like_sf (IPR036919) - T[89-248] 8.63E-59
CDD	Ribosomal_L7_euk_arc (IPR035808) - T[89-248] 2.56684E-90
Pfam	Ribosomal_L30_ferredoxin-like (IPR016082) - T[90-140] 9.4E-21
Gene3D	L30_ferredoxin-like_sf (IPR036919) - T[92-145] 1.5E-28 - T[209-236] 1.5E-28
ProSitePatterns	Ribosomal_L30_CS (IPR018038) - T[108-140] .
Gene3D	Ribosomal_L30_central_dom_arc (IPR023106) - T[146-208] 1.5E-28

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL7_HUMAN	65.417 %	322	2.24E-112
RL7L_HUMAN	47.5 %	219	5.98E-72