- Transcript 'KH2012:KH.C2.771.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.771.v1.B.ND1-1
Possible name(s)
EFHC1; EFHC2
Gene model
Location
KhC2 [7,027,853 / 7,033,136]
Amino acid sequence
Length: 499
>KH.C2.771.v1.B.ND1-1
SMATTRAEGLPFLPGNTFEDPTKSRFHVTNTLKFKNGYAQQHSPSVGLGGERLTYNQLSE
SELDELANKMPTLTYGQAKQAPPETFVPAHLAFDKKVLKFTGYFKETVHESPQEFYRVRP
VEIFYYLEDDSISVVEPHVENSGMPQGKLIKRQRLPKDDQGNHWHWKDLNLGMNVVFYGK
AFRITNCDQFTANFMESEGLILNQPESVPQDPYTESRKQPLRSYTTRSDFDKLKKFLELD
RKVLRFYCVWDDRDSMFGEMRPYVLHYFLVDDTVEIREVHKPNDGHDPFPVLLRRQRLPK
NRNDVHSSFPMIVMELTDHEVKQWFTPQDFELGKTIFINGRRLLIYDCDDFTKNYYRVMT
GQQTFQPIPVTGMANDLPKMELPPYNGFGSLEDSLQNCLSLVPQPPKKDFIKMLENDHKI
LRYEAAMDSVRQEDRNRRFIISYRLSDDMISIFEPPQRNSGIIGGKFLEATRISKPGSDV
ENPEFYGPGDFAIGATIQ+
Nucleotide sequence
Length: 1,617
>KH2012:KH.C2.771.v1.B.ND1-1
ATAGCAACGGTTGCCAAGGCAGCTCATTGTTGCTTTCTTGAAACCATCGCCTTTACCTTC
TGGTTTTTGTGTTGGGTATTTTAATTAAATTTGTTTTGCTGGAATAGTTTGACTAGTTCT
AGAGCATGGCAACGACAAGAGCGGAAGGTTTACCATTCCTTCCAGGAAATACTTTTGAAG
ATCCTACCAAATCGCGTTTCCATGTGACCAACACTCTAAAGTTTAAGAATGGATACGCAC
AACAACATTCACCAAGTGTTGGTCTTGGAGGTGAGAGACTCACTTACAATCAACTCTCGG
AGTCAGAACTCGATGAACTTGCAAATAAAATGCCGACTTTAACTTACGGCCAAGCTAAGC
AAGCACCGCCTGAAACTTTCGTTCCAGCCCATCTTGCTTTTGACAAAAAGGTGTTAAAAT
TCACGGGCTACTTTAAAGAAACTGTCCACGAGTCACCACAGGAGTTTTACAGAGTACGTC
CAGTAGAAATCTTCTATTATCTCGAAGACGACAGCATTTCTGTTGTGGAACCTCATGTTG
AGAATTCGGGGATGCCCCAGGGCAAACTTATTAAGAGGCAACGTTTGCCAAAAGATGATC
AGGGCAACCACTGGCATTGGAAAGACCTTAACCTTGGGATGAATGTTGTTTTCTATGGCA
AGGCATTTCGTATCACCAACTGCGATCAATTTACTGCAAACTTCATGGAGAGTGAAGGTC
TAATATTGAATCAACCAGAATCCGTCCCACAAGATCCTTACACTGAAAGTAGAAAGCAAC
CACTGCGTTCTTACACAACTAGGTCGGACTTCGACAAACTTAAGAAGTTTCTGGAACTTG
ATAGAAAGGTTCTCCGATTTTACTGTGTATGGGACGACCGTGACTCCATGTTTGGTGAGA
TGAGGCCGTACGTCCTCCATTATTTCCTCGTGGACGACACAGTTGAGATCAGGGAGGTTC
ACAAACCAAATGACGGACACGACCCATTTCCAGTTCTGCTAAGAAGACAAAGACTCCCGA
AAAATCGAAATGATGTTCACTCATCTTTTCCAATGATTGTAATGGAGCTGACTGACCATG
AAGTGAAGCAATGGTTCACTCCTCAAGATTTCGAACTTGGGAAAACCATCTTCATCAACG
GGAGGCGTCTACTCATCTATGATTGTGATGATTTCACTAAGAACTACTACAGAGTAATGA
CCGGCCAGCAAACATTTCAACCAATACCAGTCACAGGGATGGCAAATGATCTTCCAAAAA
TGGAACTGCCACCCTACAATGGCTTTGGTTCATTGGAAGATTCCCTTCAAAACTGCTTGA
GTTTGGTCCCCCAACCACCTAAGAAAGATTTCATTAAAATGTTGGAGAATGATCACAAGA
TACTGCGATACGAAGCAGCCATGGATTCTGTTCGACAAGAAGACAGGAACAGACGTTTCA
TCATCTCGTACCGTCTCTCAGATGATATGATCAGCATCTTTGAACCTCCGCAGAGAAACT
CCGGAATAATTGGCGGAAAGTTTCTGGAGGCAACGAGGATATCTAAGCCCGGATCGGATG
TGGAGAACCCGGAGTTTTATGGGCCTGGAGATTTTGCGATCGGGGCAACCATCCAAG
| Pfam |
DUF1126 (IPR010554) - T[88-191] 4.5E-32 - T[233-352] 5.5E-37 - T[411-498] 8.6E-25 |
| SMART |
Uncharacterised_DM10 (IPR006602) - T[94-199] 1.4E-47 - T[240-360] 3.2E-41 - T[417-498] 1.3E-12 |
| ProSiteProfiles |
Uncharacterised_DM10 (IPR006602) - T[94-199] 34.504 - T[240-360] 36.707 - T[417-498] 27.924 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EFHC1_HUMAN | 59.759 % | 634 | 0 |
| EFHC2_HUMAN | 37.925 % | 335 | 4.47E-107 |