- Transcript 'KH2012:KH.C2.776.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.776.v1.A.SL3-1
Possible name(s)
FSD1L; MID1; MID2
Gene model
Location
KhC2 [3,834,092 / 3,853,926]
Amino acid sequence
Length: 955
>KH.C2.776.v1.A.SL3-1
RYWFVRKERNMMYGTVDSDRQQTGSLKQSIYQSQKLALRKQCSYVQQQNYYNGRARNDYG
NTATDCHRRTDCSPRRDYERFCIPEDIELQNQPSRRTIDRFPRPLSPVSRVINTPSPLPR
SLSRGSSRSCQSSSADDSGREGGGASSSGIGLSSTNSSRRASSCSSGTGCSRNTYHSNVL
TLVGSSVGSISSREVTDSSELTVRDVTQRPSSENAEVAFYNERNQEHRECESQLTERAQS
MDSLENELTCPICLDLFHEPILLPCAHNLCAGCVEQFVSSHRTSGDQSGFRPTFKCPTCR
EMITLDSRGANGLRRNLTLQNIVDGYRRAAASVSPPHRNEFDVSSGDESSASNLSTQSDG
SLGPSRGRRRSRVAKETDGQDYSQLTSPMREVRESEDVVSCQFCELEPPRQAVKTCLTCR
AYYCERCLRVTHPRKKPFINHKLVPASPGNAGTLSAKSKTLSAVYCFHHAQESADLYCPV
CDMALCKGCSLKPEHDRHGIECVTEWCRKKREELEIHVTGLANQKSEVQRSVTILVEACQ
QIEATAESQEAKLHTEVESLIRVIKEREATIVARIKDTKATRLRKLTQEVTSSHQCLENL
VGVENIVKDVIGQEDNYATFMKNSKIALDRITQINSLAQMAKPPNGDIECPGFYLDFSQE
RSMLEKMNMMEAPAAPKICEELCTQSHDKVTIQWRSTDHRHVGAYELQYAVDNNRSPDNN
SKQEGWMIVPNIKECHYTINGMQTGTRYVFAVKATNKAGSSRSEQLSIKTLGIPFQFDAH
SMHKKLRLANHSYTVSREESGKKSKDFLGNSRDSTVCGVTGNVAIDSGRHYWEVVICQST
SFTMGVCYAQAARYDWNGKNSMSWCFCRTNDDWFARHDSKDSPIIMPSPEPKKIGVLLDC
DLGTVAFFDGASGRLLYTFCVSGFERPVRPCFTVGNKSLTINTGVTVPDHLHPIG
Nucleotide sequence
Length: 3,364
>KH2012:KH.C2.776.v1.A.SL3-1
AGCCCTACATTTTCATTACCTTGCTTTGTGACAAGCTGGTAATTTTAAAGGTATTGGTTT
GTGAGGAAAGAAAGGAACATGATGTACGGAACTGTCGATTCTGATCGACAACAAACGGGA
TCTTTGAAACAAAGTATCTACCAATCTCAAAAACTCGCACTGCGAAAGCAGTGCTCCTAC
GTCCAGCAACAAAACTATTACAACGGTCGTGCAAGGAACGATTACGGCAACACTGCCACT
GATTGCCATCGACGTACAGATTGCTCACCAAGAAGAGACTACGAACGCTTCTGCATTCCG
GAGGATATAGAGTTACAGAATCAGCCCTCAAGGAGAACAATTGATCGGTTTCCTCGTCCT
CTATCCCCAGTCTCAAGAGTCATCAATACTCCGAGTCCTCTTCCGAGGAGCTTGAGTCGT
GGGAGCAGCAGAAGTTGTCAAAGCTCTTCCGCTGATGACAGCGGACGCGAGGGAGGAGGT
GCATCGTCAAGTGGAATTGGTCTCAGTAGCACCAACAGCAGCAGAAGAGCAAGCAGTTGC
AGCAGTGGAACTGGTTGCAGCAGAAACACTTATCATTCAAACGTGCTCACATTAGTAGGG
AGCAGCGTTGGCAGCATCAGCAGTCGTGAGGTCACAGATTCATCCGAACTTACTGTCCGA
GACGTAACTCAACGACCATCATCAGAAAACGCAGAGGTTGCGTTCTATAACGAAAGAAAC
CAGGAGCACCGGGAGTGTGAATCTCAGTTGACCGAGAGAGCTCAGAGTATGGATTCATTA
GAAAACGAGCTCACTTGCCCGATTTGTCTAGATCTCTTTCATGAGCCGATACTTCTGCCA
TGTGCGCATAACCTATGCGCAGGCTGTGTAGAGCAATTTGTATCATCACACCGAACCTCG
GGGGATCAGAGTGGTTTCCGACCGACTTTCAAGTGCCCGACATGCCGCGAAATGATCACT
CTGGACTCGAGGGGTGCAAACGGTCTTCGCCGAAACCTGACCCTGCAGAACATAGTTGAC
GGATATCGTCGAGCTGCTGCAAGTGTCTCGCCTCCTCATAGAAACGAGTTTGACGTCAGC
AGCGGAGATGAGTCAAGCGCTTCGAACCTCTCCACACAAAGCGACGGTAGCTTGGGCCCA
AGTCGCGGTCGACGACGATCCCGCGTTGCCAAGGAAACTGACGGCCAGGACTACAGCCAG
CTGACGTCACCAATGCGTGAAGTTCGAGAATCTGAGGACGTTGTCTCCTGTCAGTTCTGC
GAGCTCGAACCACCCAGGCAAGCAGTGAAGACGTGCCTAACATGCAGGGCTTACTACTGC
GAAAGGTGTCTGCGTGTCACTCATCCACGAAAGAAGCCTTTCATCAACCACAAGCTGGTC
CCAGCAAGCCCTGGGAACGCTGGTACCCTTTCTGCCAAATCAAAAACTCTCAGTGCCGTA
TATTGCTTCCACCACGCACAGGAAAGCGCTGATCTTTATTGCCCAGTGTGCGACATGGCC
TTGTGTAAAGGTTGCAGTCTCAAGCCAGAGCACGATCGCCACGGAATTGAATGCGTCACG
GAATGGTGCAGAAAGAAAAGGGAGGAATTAGAAATCCACGTGACTGGCTTGGCCAATCAG
AAATCGGAAGTGCAGAGAAGCGTAACAATACTGGTGGAGGCATGCCAGCAAATTGAGGCC
ACAGCTGAATCCCAAGAAGCCAAACTACACACTGAAGTTGAAAGTCTCATCCGTGTAATA
AAAGAAAGAGAGGCAACAATCGTGGCAAGAATCAAAGATACAAAGGCCACGAGATTGCGA
AAGCTCACCCAGGAAGTGACGTCATCACACCAGTGCCTTGAAAATCTGGTCGGGGTTGAA
AATATTGTGAAAGATGTGATTGGACAAGAGGATAACTACGCCACGTTTATGAAGAACTCC
AAGATCGCCCTAGACAGGATCACCCAGATAAACTCTCTTGCACAGATGGCAAAACCGCCC
AATGGCGACATCGAGTGCCCTGGGTTTTACCTCGATTTCTCGCAAGAACGAAGCATGCTG
GAAAAGATGAACATGATGGAAGCTCCTGCTGCACCAAAGATCTGCGAAGAGTTATGCACA
CAGTCACACGATAAAGTGACTATTCAATGGAGATCAACCGATCATCGACATGTGGGTGCG
TACGAACTCCAATACGCCGTAGACAACAACAGGTCGCCCGACAACAACAGCAAACAAGAG
GGCTGGATGATTGTACCCAACATAAAGGAATGTCATTATACGATCAACGGTATGCAGACA
GGCACTCGTTACGTCTTCGCTGTCAAGGCAACGAACAAAGCGGGATCAAGCAGAAGCGAG
CAACTGTCGATCAAAACCTTAGGAATACCGTTCCAATTCGATGCACACTCCATGCACAAG
AAATTGCGATTGGCTAACCACAGCTACACCGTGTCACGTGAAGAATCTGGAAAGAAGTCC
AAGGACTTTTTAGGCAACAGCAGAGATAGTACTGTTTGTGGGGTGACTGGAAACGTAGCT
ATAGATTCTGGTCGTCACTATTGGGAGGTGGTGATCTGTCAGAGTACTTCTTTCACAATG
GGAGTTTGCTACGCACAAGCAGCACGATATGACTGGAACGGCAAGAACTCAATGAGCTGG
TGTTTTTGCAGAACGAACGATGATTGGTTTGCTAGACACGATAGTAAAGATTCGCCAATC
ATAATGCCAAGCCCGGAGCCAAAGAAAATCGGTGTGCTGCTGGACTGCGATTTGGGAACT
GTGGCTTTCTTCGACGGAGCGAGTGGGCGGCTGCTGTACACGTTCTGTGTTAGTGGGTTT
GAGCGACCTGTACGTCCTTGCTTCACCGTTGGAAATAAATCTTTGACCATTAACACCGGC
GTCACCGTTCCGGATCATTTGCATCCAATCGGATGAGTCGCGCTTGCTGAAGCGCCCAAG
AAACATTAGATAAAGTAACACTTTATCTTTCGCACGCAGTTTTTTTGTGTTGTTCTTGTC
AACATAGTATTTGTAGTATTGTGCTTTATTTATTCCGTTTCACATTCAAATTAAACAGCA
GTTGCTCTTAGTTAAGTAATTGCTACTTTAATCACGCTGCTGTAATTTACTTTATTTAAG
TTCCCCGCTGTGTAGTTACCGCTATCTGTCGTATGTTTACCGTTGTCGTATATTTGCGCG
TACAATATCGCTTGGTCGCTATATCTTTAACATTAGATTTCTATGCAAGCTGGTCTTGTT
TAAAATGCGGCAGGACCCTTTCATAGCTCGTTTACGCCGCCGCGTGGACGAAACACAGTA
ATCATTGCTATTTGCAGTCATCGTGTACTTTTTGCTTTCCAATAAAATTATCGGTGCAAA
AATA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[201-331] 1.5E-21 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[250-300] 12.135 |
| SMART |
Znf_RING (IPR001841) - T[250-299] 1.6E-7 - T[401-481] 4.8 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[250-297] 8.5E-9 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[265-274] . |
| SMART |
Znf_B-box (IPR000315) - T[396-446] 4.7E-4 - T[461-503] 0.17 |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[396-446] 8.759 - T[461-503] 10.822 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[667-773] 4.0E-12 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[672-773] 12.237 |
| Gene3D |
Ig-like_fold (IPR013783) - T[672-769] 9.0E-24 |
| SMART |
FN3_dom (IPR003961) - T[673-761] 6.0E-5 |
| Pfam |
FN3_dom (IPR003961) - T[685-761] 8.2E-8 |
| CDD |
FN3_dom (IPR003961) - T[686-770] 2.99292E-8 |
| ProSiteProfiles |
B30.2/SPRY (IPR001870) - T[755-948] 21.254 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[774-941] 7.52E-35 |
| PRINTS |
Butyrophylin_SPRY (IPR003879) - T[812-836] 8.4E-13 - T[885-909] 8.4E-13 - T[916-934] 8.4E-13 |
| SMART |
SPRY_dom (IPR003877) - T[827-947] 8.0E-12 |
| Pfam |
SPRY_dom (IPR003877) - T[829-944] 3.1E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRI18_HUMAN | 39.216 % | 533 | 6.86E-179 |
| TRIM1_HUMAN | 36.962 % | 508 | 3.83E-168 |
| FSD1L_HUMAN | 27.883 % | 172 | 1.22E-45 |