Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 605

>KH.C2.776.v2.A.SL2-1
ASNLSTQSDGSLGPSRGRRRSRVAKETDGQDYSQLTSPMREVRESEDVVSCQFCELEPPR
QAVKTCLTCRAYYCERCLRVTHPRKKPFINHKLVPASPGNAGTLSAKSKTLSAVYCFHHA
QESADLYCPVCDMALCKGCSLKPEHDRHGIECVTEWCRKKREELEIHVTGLANQKSEVQR
SVTILVEACQQIEATAESQEAKLHTEVESLIRVIKEREATIVARIKDTKATRLRKLTQEV
TSSHQCLENLVGVENIVKDVIGQEDNYATFMKNSKIALDRITQINSLAQMAKPPNGDIEC
PGFYLDFSQERSMLEKMNMMEAPAAPKICEELCTQSHDKVTIQWRSTDHRHVGAYELQYA
VDNNRSPDNNSKQEGWMIVPNIKECHYTINGMQTGTRYVFAVKATNKAGSSRSEQLSIKT
LGIPFQFDAHSMHKKLRLANHSYTVSREESGKKSKDFLGNSRDSTVCGVTGNVAIDSGRH
YWEVVICQSTSFTMGVCYAQAARYDWNGKNSMSWCFCRTNDDWFARHDSKDSPIIMPSPE
PKKIGVLLDCDLGTVAFFDGASGRLLYTFCVSGFERPVRPCFTVGNKSLTINTGVTVPDH
LHPIG

Nucleotide sequence

Length: 2,267

>KH2012:KH.C2.776.v2.A.SL2-1
CGCTTCGAACCTCTCCACACAAAGCGACGGTAGCTTGGGCCCAAGTCGCGGTCGACGACG
ATCCCGCGTTGCCAAGGAAACTGACGGCCAGGACTACAGCCAGCTGACGTCACCAATGCG
TGAAGTTCGAGAATCTGAGGACGTTGTCTCCTGTCAGTTCTGCGAGCTCGAACCACCCAG
GCAAGCAGTGAAGACGTGCCTAACATGCAGGGCTTACTACTGCGAAAGGTGTCTGCGTGT
CACTCATCCACGAAAGAAGCCTTTCATCAACCACAAGCTGGTCCCAGCAAGCCCTGGGAA
CGCTGGTACCCTTTCTGCCAAATCAAAAACTCTCAGTGCCGTATATTGCTTCCACCACGC
ACAGGAAAGCGCTGATCTTTATTGCCCAGTGTGCGACATGGCCTTGTGTAAAGGTTGCAG
TCTCAAGCCAGAGCACGATCGCCACGGAATTGAATGCGTCACGGAATGGTGCAGAAAGAA
AAGGGAGGAATTAGAAATCCACGTGACTGGCTTGGCCAATCAGAAATCGGAAGTGCAGAG
AAGCGTAACAATACTGGTGGAGGCATGCCAGCAAATTGAGGCCACAGCTGAATCCCAAGA
AGCCAAACTACACACTGAAGTTGAAAGTCTCATCCGTGTAATAAAAGAAAGAGAGGCAAC
AATCGTGGCAAGAATCAAAGATACAAAGGCCACGAGATTGCGAAAGCTCACCCAGGAAGT
GACGTCATCACACCAGTGCCTTGAAAATCTGGTCGGGGTTGAAAATATTGTGAAAGATGT
GATTGGACAAGAGGATAACTACGCCACGTTTATGAAGAACTCCAAGATCGCCCTAGACAG
GATCACCCAGATAAACTCTCTTGCACAGATGGCAAAACCGCCCAATGGCGACATCGAGTG
CCCTGGGTTTTACCTCGATTTCTCGCAAGAACGAAGCATGCTGGAAAAGATGAACATGAT
GGAAGCTCCTGCTGCACCAAAGATCTGCGAAGAGTTATGCACACAGTCACACGATAAAGT
GACTATTCAATGGAGATCAACCGATCATCGACATGTGGGTGCGTACGAACTCCAATACGC
CGTAGACAACAACAGGTCGCCCGACAACAACAGCAAACAAGAGGGCTGGATGATTGTACC
CAACATAAAGGAATGTCATTATACGATCAACGGTATGCAGACAGGCACTCGTTACGTCTT
CGCTGTCAAGGCAACGAACAAAGCGGGATCAAGCAGAAGCGAGCAACTGTCGATCAAAAC
CTTAGGAATACCGTTCCAATTCGATGCACACTCCATGCACAAGAAATTGCGATTGGCTAA
CCACAGCTACACCGTGTCACGTGAAGAATCTGGAAAGAAGTCCAAGGACTTTTTAGGCAA
CAGCAGAGATAGTACTGTTTGTGGGGTGACTGGAAACGTAGCTATAGATTCTGGTCGTCA
CTATTGGGAGGTGGTGATCTGTCAGAGTACTTCTTTCACAATGGGAGTTTGCTACGCACA
AGCAGCACGATATGACTGGAACGGCAAGAACTCAATGAGCTGGTGTTTTTGCAGAACGAA
CGATGATTGGTTTGCTAGACACGATAGTAAAGATTCGCCAATCATAATGCCAAGCCCGGA
GCCAAAGAAAATCGGTGTGCTGCTGGACTGCGATTTGGGAACTGTGGCTTTCTTCGACGG
AGCGAGTGGGCGGCTGCTGTACACGTTCTGTGTTAGTGGGTTTGAGCGACCTGTACGTCC
TTGCTTCACCGTTGGAAATAAATCTTTGACCATTAACACCGGCGTCACCGTTCCGGATCA
TTTGCATCCAATCGGATGAGTCGCGCTTGCTGAAGCGCCCAAGAAACATTAGATAAAGTA
ACACTTTATCTTTCGCACGCAGTTTTTTTGTGTTGTTCTTGTCAACATAGTATTTGTAGT
ATTGTGCTTTATTTATTCCGTTTCACATTCAAATTAAACAGCAGTTGCTCTTAGTTAAGT
AATTGCTACTTTAATCACGCTGCTGTAATTTACTTTATTTAAGTTCCCCGCTGTGTAGTT
ACCGCTATCTGTCGTATGTTTACCGTTGTCGTATATTTGCGCGTACAATATCGCTTGGTC
GCTATATCTTTAACATTAGATTTCTATGCAAGCTGGTCTTGTTTAAAATGCGGCAGGACC
CTTTCATAGCTCGTTTACGCCGCCGCGTGGACGAAACACAGTAATCATTGCTATTTGCAG
TCATCGTGTACTTTTTGCTTTCCAATAAAATTATCGGTGCAAAAATA

InterProScan

SMART	Znf_B-box (IPR000315) - T[46-96] 4.7E-4 - T[111-153] 0.17
ProSiteProfiles	Znf_B-box (IPR000315) - T[46-96] 8.759 - T[111-153] 10.822
SUPERFAMILY	FN3_sf (IPR036116) - T[317-423] 1.98E-12
Gene3D	Ig-like_fold (IPR013783) - T[322-419] 4.7E-24
ProSiteProfiles	FN3_dom (IPR003961) - T[322-423] 12.237
SMART	FN3_dom (IPR003961) - T[323-411] 6.0E-5
Pfam	FN3_dom (IPR003961) - T[334-411] 4.3E-8
CDD	FN3_dom (IPR003961) - T[336-420] 1.61091E-8
ProSiteProfiles	B30.2/SPRY (IPR001870) - T[405-598] 21.254
SUPERFAMILY	ConA-like_dom_sf (IPR013320) - T[424-591] 3.44E-35
PRINTS	Butyrophylin_SPRY (IPR003879) - T[462-486] 2.4E-13 - T[535-559] 2.4E-13 - T[566-584] 2.4E-13
SMART	SPRY_dom (IPR003877) - T[477-597] 8.0E-12
Pfam	SPRY_dom (IPR003877) - T[479-594] 1.6E-13