- Clone 'cign064d12' >
- Transcript 'KH2012:KH.C8.734.v1....' >
- Transcript 'KH2012:KH.C2.87.v1.A...' >
- Transcript 'KH2012:KH.C2.88.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C2.88.v1.A.nonSL41-1
Possible name(s)
CDC16; CDC23; CDC27
Gene model
Location
KhC2 [1,509,860 / 1,519,487]
Amino acid sequence
Length: 888
>KH.C2.88.v1.A.nonSL41-1
HIQQLNNSYIVMTVLQDPIKSAIWHCLNHYAYKDAMFLAERLYAEVASDEAMFLLATSYY
RSGKPKVVQILLEKHGMRQPECKLLYAQACWDLENYAQAEHVLAGGSIKFKSIVNIVSDV
QMEYGDSASFALSLLGCIYQHTERGDWAEYCLTSSLKANPFLWSSFEQLCEAGNTPNIDE
LFPSNVCGTSEFKTPYISSFNMSLQQTPQIVQARRKKGNTVKILAPSQVGSNTDRADPNT
SLSPTLIPMQTPDQSHPTLGCPMVQTTPSSEDTRGLDRTSSCKERSVDQDNSDFLRSTPS
ENQWDSSVDSYTGLQSRKKHSRTQQRISRSLMGGPAALSPLTPSFGVMPLVETPSPAWER
SVTMITPSELTAPPMDINPPVKKMITRQSRKNELTNATGKLLFSSENSRRSQEVQISTSE
APSALSSTRRSTRNYSNTGSSVKENTKKTTRGKQAQPKDVLKRNTRLRHTKPLISDGTVR
DLSEEINKVDSGCEKSHSTTTNATQVLSAQKAAIDGLMSLLCDMGKALVALCHYDCRKAI
SCIESLPSNQRDTCWSLSLLARAYFEMTEYKKAAKTFNELRSMFPHQVSGLALYSTTLWH
LQDNIALCTLAHDLKNVDPLSPETWCCIGNCFSLRRDNENAIKFFARAVQLDTHYAYAHT
LLGHEYAYSDDNDRAMASYRRAIHCDKRHYNAWYGIGSIYYKQENFSLAEIHFKKALSIN
RKSSVLLCHLGIVQHAQKRSSVALQTLANALTLEPRNPLCKFHRASILFATEQHKEALKE
LLELKLIVPKESLVYFLIGKVYKVLGENHLAMMNFSWALDLDPKGINNHIKEAIDKQQGA
DDGFDSSHLGSQTRDADESGSTADIMNSIIDEVESTEHEMLADSDESL
Nucleotide sequence
Length: 3,016
>KH2012:KH.C2.88.v1.A.nonSL41-1
AAAACCTTAATTGAAAAGGGTACCGTAGGTTATGAGAAGATAAACTATTTTCTTTTGATT
GGCATAAGTGCAAAATCGAATTGTAGAAATCGTATCCGTTCTACTTGGTTGGTGGCATAA
CATATACAACAACTGAACAACAGCTACATTGTGATGACTGTTCTGCAAGATCCTATAAAG
AGCGCTATTTGGCATTGTCTGAACCATTATGCCTACAAAGATGCCATGTTTTTAGCAGAG
CGCCTGTATGCTGAAGTTGCATCAGATGAAGCAATGTTTTTGTTAGCAACTTCATATTAC
CGATCTGGTAAACCAAAAGTCGTCCAGATCTTATTGGAGAAACATGGAATGCGGCAACCT
GAATGTAAACTTCTGTATGCTCAAGCTTGTTGGGACCTCGAGAATTATGCTCAAGCCGAA
CATGTGCTTGCTGGTGGGTCTATAAAATTTAAATCTATTGTAAACATTGTTTCTGACGTT
CAAATGGAATATGGTGATTCTGCTTCCTTTGCTCTGTCACTTCTCGGTTGTATATACCAA
CACACAGAAAGAGGTGACTGGGCTGAGTACTGCCTCACTAGCAGTCTCAAGGCAAACCCT
TTTCTGTGGTCTTCGTTTGAGCAACTGTGTGAAGCAGGAAACACGCCAAATATTGACGAG
CTTTTCCCCTCCAATGTATGTGGCACATCTGAGTTCAAAACTCCCTATATTTCATCGTTT
AATATGTCCCTGCAACAAACCCCACAAATAGTTCAAGCCAGAAGGAAAAAAGGAAACACA
GTTAAAATATTAGCTCCAAGTCAGGTAGGATCCAACACTGATCGAGCAGATCCAAATACT
TCACTCTCACCAACTCTAATTCCAATGCAAACACCAGATCAATCTCATCCAACACTTGGT
TGTCCTATGGTGCAGACAACACCATCTTCTGAAGACACACGTGGTCTAGACCGTACATCT
TCATGTAAAGAAAGATCTGTTGATCAAGACAATTCGGATTTTCTACGATCAACTCCATCT
GAAAATCAATGGGACAGCTCAGTTGATTCCTACACTGGCCTTCAATCTCGTAAAAAGCAC
AGTCGTACACAGCAGCGAATATCAAGAAGCTTAATGGGAGGTCCTGCAGCTCTAAGTCCT
TTAACACCCAGTTTTGGTGTGATGCCTCTTGTTGAGACTCCAAGTCCAGCTTGGGAGCGA
TCAGTGACCATGATCACTCCATCAGAGCTCACTGCACCTCCAATGGATATCAATCCTCCA
GTTAAAAAGATGATAACAAGACAATCAAGGAAAAATGAACTTACCAACGCAACTGGAAAA
CTTCTTTTTTCATCTGAAAACAGCCGTCGTAGTCAGGAGGTACAAATCTCAACAAGCGAG
GCCCCGTCCGCACTTTCCTCCACACGTAGAAGTACACGAAACTATTCAAACACTGGCAGT
TCTGTCAAGGAGAATACAAAAAAGACGACGAGAGGAAAGCAAGCTCAACCTAAAGATGTT
TTAAAGAGAAACACCCGTCTAAGACACACTAAACCCTTAATATCTGATGGAACTGTACGA
GATTTATCGGAAGAAATCAACAAAGTGGATTCTGGTTGTGAAAAGTCGCATTCAACCACT
ACCAATGCTACACAAGTCTTGTCCGCACAGAAAGCTGCAATTGATGGATTAATGTCACTC
TTATGTGACATGGGCAAGGCACTGGTGGCCTTATGTCACTATGATTGTAGAAAAGCGATT
TCCTGCATTGAATCTTTACCTTCAAATCAGCGTGATACATGTTGGTCACTCTCACTACTT
GCACGTGCCTATTTTGAAATGACCGAATATAAAAAGGCAGCAAAGACATTCAATGAACTA
CGTTCCATGTTTCCTCACCAAGTATCTGGATTGGCTCTCTATAGCACCACCTTATGGCAT
TTACAAGACAACATCGCACTGTGCACTCTTGCCCACGACCTTAAGAATGTTGACCCCTTG
TCTCCAGAGACATGGTGCTGCATAGGAAATTGCTTCTCCCTCCGCCGTGACAATGAAAAT
GCCATCAAATTTTTCGCAAGAGCCGTGCAGCTTGACACACATTATGCATATGCTCATACA
CTACTAGGTCACGAATATGCATATAGTGATGACAATGATCGTGCCATGGCAAGCTATAGG
AGGGCTATACATTGTGATAAAAGGCATTATAATGCATGGTATGGAATTGGATCTATTTAT
TACAAACAAGAAAACTTTTCTCTTGCTGAAATTCATTTCAAGAAAGCTTTGTCCATCAAT
CGAAAAAGTTCTGTGCTGTTATGTCATTTAGGGATTGTTCAGCATGCACAGAAGCGTTCC
TCTGTTGCTCTACAAACCTTAGCAAACGCACTCACCTTAGAACCACGGAATCCACTCTGC
AAGTTCCATCGTGCCAGTATTTTATTTGCCACTGAGCAACACAAAGAAGCATTAAAAGAA
TTACTTGAACTGAAACTAATCGTTCCAAAAGAAAGTTTGGTTTATTTTCTTATAGGAAAG
GTTTATAAAGTCCTTGGAGAGAATCACCTTGCAATGATGAATTTCTCATGGGCTCTTGAC
CTTGATCCGAAAGGAATCAATAACCACATCAAGGAAGCCATTGATAAACAACAAGGAGCA
GATGACGGCTTTGACAGCAGTCATCTTGGTTCACAAACACGAGATGCAGATGAATCTGGA
AGCACTGCTGACATTATGAATTCAATAATAGATGAAGTAGAATCTACTGAACACGAAATG
CTTGCTGATAGTGATGAGAGTTTATGATATATTAACTACTCTAGTAATATTTGAAACTGT
TTCGCATCATCCGCCCACTGCGAATTACCTCTTTATCTGCTGAGAATTTTTCAGCTGAAG
TGAAAAATACAGAAATAAATAAAGTGTAGGAAATTACCACACTGTTCATTTATAGAAAAA
AACATTTAATAATATGTCATGCAATTTGGAAGTACAACAGATATAATAAACTCTGAAAGA
AACAAAGGCAACAAAA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[11-183] 7.5E-41 - T[510-586] 1.1E-20 - T[587-719] 1.2E-45 - T[720-823] 1.8E-29 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[49-170] 6.33E-15 - T[510-580] 6.33E-15 - T[619-826] 4.55E-35 |
| SMART |
TPR_repeat (IPR019734) - T[129-162] 33.0 - T[554-587] 6.9 - T[622-655] 0.0023 - T[656-689] 0.13 - T[690-723] 3.1E-6 - T[724-757] 21.0 - T[758-791] 370.0 - T[792-825] 1.5 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[554-587] 7.788 - T[622-655] 9.116 - T[656-689] 8.88 - T[690-723] 10.502 - T[724-757] 7.7 - T[792-825] 9.912 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[554-825] 37.152 |
| Pfam |
TPR_repeat (IPR019734) - T[559-585] 0.031 |
| Pfam |
TPR_1 (IPR001440) - T[691-722] 1.9E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC23_HUMAN | 35.028 % | 109 | 8.32E-25 |
| CDC27_HUMAN | 45.679 % | 693 | 0 |