- Transcript 'KH2012:KH.C2.88.v3.A...'
Transcript Model
Transcript Id
KH2012:KH.C2.88.v3.A.nonSL37-1
Possible name(s)
CDC16; CDC23; CDC27
Gene model
Location
KhC2 [1,509,815 / 1,519,487]
Amino acid sequence
Length: 804
>KH.C2.88.v3.A.nonSL37-1
HIQQLNNSYIVMTVLQDPIKSAIWHCLNHYAYKDAMFLAERLYAEVASDEAMFLLATSYY
RSGKPKVVQILLEKHGMRQPECKLLYAQACWDLENYAQAEHVLAGGSIKFKSIVNIVSDV
QMEYGDSASFALSLLGCIYQHTERGDWAEYCLTSSLKANPFLWSSFEQLCEAGNTPNIDE
LFPSNVCGTSEFKTPYISSFNMSLQQTPQIVQARRKKGNTVKILAPSQVGSNTDRADPNT
SLSPTLIPMQTPDQSHPTLGCPMVQTTPSSEDTRGLDRTSSCKERSVDQDNSDFLRSTPS
ENQWDSSVDSYTGLQSRKKHSRTQQRISRSLMGGPAALSPLTPSFGVMPLVETPSPAWER
SVTMITPSELTAPPMDINPPVKKMITRQSRKNELTNATGKLLFSSENSRRSQEVQISTSE
APSALSSTRRSTRNYSNTGSSVKENTKKTTRGKQAQPKDVLKRNTRLRHTKPLISDGTVR
DLSEEINKVDSGCEKSHSTTTNATQVLSAQKAAIDGLMSLLCDMGKALVALCHYDCRKAI
SCIESLPSNQRDTCWSLSLLARAYFEMTEYKKAAKTFNELRSMFPHQVSGLALYSTTLWH
LQDNIALCTLAHDLKNVDPLSPETWCCIGNCFSLRRDNENAIKFFARAVQLDTHYAYAHT
LLGHEYAYSDDNDRAMASYRRAIHCDKRHYNAWYGIGSIYYKQENFSLAEIHFKKALSIN
RKSSVLLCHLGIVQHAQKRSSVALQTLANALTLEPRNPLCKFHRASILFATEQHKEALKE
LLELKLIVPKESLVYFLIGKVCCP
Nucleotide sequence
Length: 3,140
>KH2012:KH.C2.88.v3.A.nonSL37-1
TTTTCGTTTGTTAACTGTCCTTGAAACAATAGGGGTTTATTAATGAAAACCTTAATTGAA
AAGGGTACCGTAGGTTATGAGAAGATAAACTATTTTCTTTTGATTGGCATAAGTGCAAAA
TCGAATTGTAGAAATCGTATCCGTTCTACTTGGTTGGTGGCATAACATATACAACAACTG
AACAACAGCTACATTGTGATGACTGTTCTGCAAGATCCTATAAAGAGCGCTATTTGGCAT
TGTCTGAACCATTATGCCTACAAAGATGCCATGTTTTTAGCAGAGCGCCTGTATGCTGAA
GTTGCATCAGATGAAGCAATGTTTTTGTTAGCAACTTCATATTACCGATCTGGTAAACCA
AAAGTCGTCCAGATCTTATTGGAGAAACATGGAATGCGGCAACCTGAATGTAAACTTCTG
TATGCTCAAGCTTGTTGGGACCTCGAGAATTATGCTCAAGCCGAACATGTGCTTGCTGGT
GGGTCTATAAAATTTAAATCTATTGTAAACATTGTTTCTGACGTTCAAATGGAATATGGT
GATTCTGCTTCCTTTGCTCTGTCACTTCTCGGTTGTATATACCAACACACAGAAAGAGGT
GACTGGGCTGAGTACTGCCTCACTAGCAGTCTCAAGGCAAACCCTTTTCTGTGGTCTTCG
TTTGAGCAACTGTGTGAAGCAGGAAACACGCCAAATATTGACGAGCTTTTCCCCTCCAAT
GTATGTGGCACATCTGAGTTCAAAACTCCCTATATTTCATCGTTTAATATGTCCCTGCAA
CAAACCCCACAAATAGTTCAAGCCAGAAGGAAAAAAGGAAACACAGTTAAAATATTAGCT
CCAAGTCAGGTAGGATCCAACACTGATCGAGCAGATCCAAATACTTCACTCTCACCAACT
CTAATTCCAATGCAAACACCAGATCAATCTCATCCAACACTTGGTTGTCCTATGGTGCAG
ACAACACCATCTTCTGAAGACACACGTGGTCTAGACCGTACATCTTCATGTAAAGAAAGA
TCTGTTGATCAAGACAATTCGGATTTTCTACGATCAACTCCATCTGAAAATCAATGGGAC
AGCTCAGTTGATTCCTACACTGGCCTTCAATCTCGTAAAAAGCACAGTCGTACACAGCAG
CGAATATCAAGAAGCTTAATGGGAGGTCCTGCAGCTCTAAGTCCTTTAACACCCAGTTTT
GGTGTGATGCCTCTTGTTGAGACTCCAAGTCCAGCTTGGGAGCGATCAGTGACCATGATC
ACTCCATCAGAGCTCACTGCACCTCCAATGGATATCAATCCTCCAGTTAAAAAGATGATA
ACAAGACAATCAAGGAAAAATGAACTTACCAACGCAACTGGAAAACTTCTTTTTTCATCT
GAAAACAGCCGTCGTAGTCAGGAGGTACAAATCTCAACAAGCGAGGCCCCGTCCGCACTT
TCCTCCACACGTAGAAGTACACGAAACTATTCAAACACTGGCAGTTCTGTCAAGGAGAAT
ACAAAAAAGACGACGAGAGGAAAGCAAGCTCAACCTAAAGATGTTTTAAAGAGAAACACC
CGTCTAAGACACACTAAACCCTTAATATCTGATGGAACTGTACGAGATTTATCGGAAGAA
ATCAACAAAGTGGATTCTGGTTGTGAAAAGTCGCATTCAACCACTACCAATGCTACACAA
GTCTTGTCCGCACAGAAAGCTGCAATTGATGGATTAATGTCACTCTTATGTGACATGGGC
AAGGCACTGGTGGCCTTATGTCACTATGATTGTAGAAAAGCGATTTCCTGCATTGAATCT
TTACCTTCAAATCAGCGTGATACATGTTGGTCACTCTCACTACTTGCACGTGCCTATTTT
GAAATGACCGAATATAAAAAGGCAGCAAAGACATTCAATGAACTACGTTCCATGTTTCCT
CACCAAGTATCTGGATTGGCTCTCTATAGCACCACCTTATGGCATTTACAAGACAACATC
GCACTGTGCACTCTTGCCCACGACCTTAAGAATGTTGACCCCTTGTCTCCAGAGACATGG
TGCTGCATAGGAAATTGCTTCTCCCTCCGCCGTGACAATGAAAATGCCATCAAATTTTTC
GCAAGAGCCGTGCAGCTTGACACACATTATGCATATGCTCATACACTACTAGGTCACGAA
TATGCATATAGTGATGACAATGATCGTGCCATGGCAAGCTATAGGAGGGCTATACATTGT
GATAAAAGGCATTATAATGCATGGTATGGAATTGGATCTATTTATTACAAACAAGAAAAC
TTTTCTCTTGCTGAAATTCATTTCAAGAAAGCTTTGTCCATCAATCGAAAAAGTTCTGTG
CTGTTATGTCATTTAGGGATTGTTCAGCATGCACAGAAGCGTTCCTCTGTTGCTCTACAA
ACCTTAGCAAACGCACTCACCTTAGAACCACGGAATCCACTCTGCAAGTTCCATCGTGCC
AGTATTTTATTTGCCACTGAGCAACACAAAGAAGCATTAAAAGAATTACTTGAACTGAAA
CTAATCGTTCCAAAAGAAAGTTTGGTTTATTTTCTTATAGGAAAGGTTTGTTGCCCATAG
ATGCGTTGAATAAATCCCTTATTATTAGTGACCTATTGGGGCTTACAATATGACTACCTA
TTAGGTTTATAAAGTCCTTGGAGAGAATCACCTTGCAATGATGAATTTCTCATGGGCTCT
TGACCTTGATCCGAAAGGAATCAATAACCACATCAAGGAAGCCATTGATAAACAACAAGG
AGCAGATGACGGCTTTGACAGCAGTCATCTTGGTTCACAAACACGAGATGCAGATGAATC
TGGAAGCACTGCTGACATTATGAATTCAATAATAGATGAAGTAGAATCTACTGAACACGA
AATGCTTGCTGATAGTGATGAGAGTTTATGATATATTAACTACTCTAGTAATATTTGAAA
CTGTTTCGCATCATCCGCCCACTGCGAATTACCTCTTTATCTGCTGAGAATTTTTCAGCT
GAAGTGAAAAATACAGAAATAAATAAAGTGTAGGAAATTACCACACTGTTCATTTATAGA
AAAAAACATTTAATAATATGTCATGCAATTTGGAAGTACAACAGATATAATAAACTCTGA
AAGAAACAAAGGCAACAAAA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[11-183] 6.4E-41 - T[510-586] 9.7E-21 - T[587-719] 1.0E-45 - T[720-803] 1.0E-19 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[49-170] 4.95E-15 - T[510-580] 4.95E-15 - T[619-783] 1.14E-31 |
| SMART |
TPR_repeat (IPR019734) - T[129-162] 33.0 - T[554-587] 6.9 - T[622-655] 0.0023 - T[656-689] 0.13 - T[690-723] 3.1E-6 - T[724-757] 21.0 - T[758-791] 370.0 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[554-587] 7.788 - T[622-655] 9.116 - T[656-689] 8.88 - T[690-723] 10.502 - T[724-757] 7.7 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[554-791] 30.011 |
| Pfam |
TPR_repeat (IPR019734) - T[559-585] 0.027 |
| Pfam |
TPR_1 (IPR001440) - T[691-722] 1.7E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC23_HUMAN | 35.028 % | 109 | 7.69E-25 |
| CDC27_HUMAN | 44.891 % | 625 | 0 |