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- Transcript 'KH2012:KH.C2.88.v3.A...'
Transcript Model
Transcript Id
KH2012:KH.C2.88.v3.A.nonSL44-1
Possible name(s)
CDC16; CDC23; CDC27
Gene model
Location
KhC2 [1,509,834 / 1,519,487]
Amino acid sequence
Length: 804
>KH.C2.88.v3.A.nonSL44-1
HIQQLNNSYIVMTVLQDPIKSAIWHCLNHYAYKDAMFLAERLYAEVASDEAMFLLATSYY
RSGKPKVVQILLEKHGMRQPECKLLYAQACWDLENYAQAEHVLAGGSIKFKSIVNIVSDV
QMEYGDSASFALSLLGCIYQHTERGDWAEYCLTSSLKANPFLWSSFEQLCEAGNTPNIDE
LFPSNVCGTSEFKTPYISSFNMSLQQTPQIVQARRKKGNTVKILAPSQVGSNTDRADPNT
SLSPTLIPMQTPDQSHPTLGCPMVQTTPSSEDTRGLDRTSSCKERSVDQDNSDFLRSTPS
ENQWDSSVDSYTGLQSRKKHSRTQQRISRSLMGGPAALSPLTPSFGVMPLVETPSPAWER
SVTMITPSELTAPPMDINPPVKKMITRQSRKNELTNATGKLLFSSENSRRSQEVQISTSE
APSALSSTRRSTRNYSNTGSSVKENTKKTTRGKQAQPKDVLKRNTRLRHTKPLISDGTVR
DLSEEINKVDSGCEKSHSTTTNATQVLSAQKAAIDGLMSLLCDMGKALVALCHYDCRKAI
SCIESLPSNQRDTCWSLSLLARAYFEMTEYKKAAKTFNELRSMFPHQVSGLALYSTTLWH
LQDNIALCTLAHDLKNVDPLSPETWCCIGNCFSLRRDNENAIKFFARAVQLDTHYAYAHT
LLGHEYAYSDDNDRAMASYRRAIHCDKRHYNAWYGIGSIYYKQENFSLAEIHFKKALSIN
RKSSVLLCHLGIVQHAQKRSSVALQTLANALTLEPRNPLCKFHRASILFATEQHKEALKE
LLELKLIVPKESLVYFLIGKVCCP
Nucleotide sequence
Length: 3,121
>KH2012:KH.C2.88.v3.A.nonSL44-1
CTTGAAACAATAGGGGTTTATTAATGAAAACCTTAATTGAAAAGGGTACCGTAGGTTATG
AGAAGATAAACTATTTTCTTTTGATTGGCATAAGTGCAAAATCGAATTGTAGAAATCGTA
TCCGTTCTACTTGGTTGGTGGCATAACATATACAACAACTGAACAACAGCTACATTGTGA
TGACTGTTCTGCAAGATCCTATAAAGAGCGCTATTTGGCATTGTCTGAACCATTATGCCT
ACAAAGATGCCATGTTTTTAGCAGAGCGCCTGTATGCTGAAGTTGCATCAGATGAAGCAA
TGTTTTTGTTAGCAACTTCATATTACCGATCTGGTAAACCAAAAGTCGTCCAGATCTTAT
TGGAGAAACATGGAATGCGGCAACCTGAATGTAAACTTCTGTATGCTCAAGCTTGTTGGG
ACCTCGAGAATTATGCTCAAGCCGAACATGTGCTTGCTGGTGGGTCTATAAAATTTAAAT
CTATTGTAAACATTGTTTCTGACGTTCAAATGGAATATGGTGATTCTGCTTCCTTTGCTC
TGTCACTTCTCGGTTGTATATACCAACACACAGAAAGAGGTGACTGGGCTGAGTACTGCC
TCACTAGCAGTCTCAAGGCAAACCCTTTTCTGTGGTCTTCGTTTGAGCAACTGTGTGAAG
CAGGAAACACGCCAAATATTGACGAGCTTTTCCCCTCCAATGTATGTGGCACATCTGAGT
TCAAAACTCCCTATATTTCATCGTTTAATATGTCCCTGCAACAAACCCCACAAATAGTTC
AAGCCAGAAGGAAAAAAGGAAACACAGTTAAAATATTAGCTCCAAGTCAGGTAGGATCCA
ACACTGATCGAGCAGATCCAAATACTTCACTCTCACCAACTCTAATTCCAATGCAAACAC
CAGATCAATCTCATCCAACACTTGGTTGTCCTATGGTGCAGACAACACCATCTTCTGAAG
ACACACGTGGTCTAGACCGTACATCTTCATGTAAAGAAAGATCTGTTGATCAAGACAATT
CGGATTTTCTACGATCAACTCCATCTGAAAATCAATGGGACAGCTCAGTTGATTCCTACA
CTGGCCTTCAATCTCGTAAAAAGCACAGTCGTACACAGCAGCGAATATCAAGAAGCTTAA
TGGGAGGTCCTGCAGCTCTAAGTCCTTTAACACCCAGTTTTGGTGTGATGCCTCTTGTTG
AGACTCCAAGTCCAGCTTGGGAGCGATCAGTGACCATGATCACTCCATCAGAGCTCACTG
CACCTCCAATGGATATCAATCCTCCAGTTAAAAAGATGATAACAAGACAATCAAGGAAAA
ATGAACTTACCAACGCAACTGGAAAACTTCTTTTTTCATCTGAAAACAGCCGTCGTAGTC
AGGAGGTACAAATCTCAACAAGCGAGGCCCCGTCCGCACTTTCCTCCACACGTAGAAGTA
CACGAAACTATTCAAACACTGGCAGTTCTGTCAAGGAGAATACAAAAAAGACGACGAGAG
GAAAGCAAGCTCAACCTAAAGATGTTTTAAAGAGAAACACCCGTCTAAGACACACTAAAC
CCTTAATATCTGATGGAACTGTACGAGATTTATCGGAAGAAATCAACAAAGTGGATTCTG
GTTGTGAAAAGTCGCATTCAACCACTACCAATGCTACACAAGTCTTGTCCGCACAGAAAG
CTGCAATTGATGGATTAATGTCACTCTTATGTGACATGGGCAAGGCACTGGTGGCCTTAT
GTCACTATGATTGTAGAAAAGCGATTTCCTGCATTGAATCTTTACCTTCAAATCAGCGTG
ATACATGTTGGTCACTCTCACTACTTGCACGTGCCTATTTTGAAATGACCGAATATAAAA
AGGCAGCAAAGACATTCAATGAACTACGTTCCATGTTTCCTCACCAAGTATCTGGATTGG
CTCTCTATAGCACCACCTTATGGCATTTACAAGACAACATCGCACTGTGCACTCTTGCCC
ACGACCTTAAGAATGTTGACCCCTTGTCTCCAGAGACATGGTGCTGCATAGGAAATTGCT
TCTCCCTCCGCCGTGACAATGAAAATGCCATCAAATTTTTCGCAAGAGCCGTGCAGCTTG
ACACACATTATGCATATGCTCATACACTACTAGGTCACGAATATGCATATAGTGATGACA
ATGATCGTGCCATGGCAAGCTATAGGAGGGCTATACATTGTGATAAAAGGCATTATAATG
CATGGTATGGAATTGGATCTATTTATTACAAACAAGAAAACTTTTCTCTTGCTGAAATTC
ATTTCAAGAAAGCTTTGTCCATCAATCGAAAAAGTTCTGTGCTGTTATGTCATTTAGGGA
TTGTTCAGCATGCACAGAAGCGTTCCTCTGTTGCTCTACAAACCTTAGCAAACGCACTCA
CCTTAGAACCACGGAATCCACTCTGCAAGTTCCATCGTGCCAGTATTTTATTTGCCACTG
AGCAACACAAAGAAGCATTAAAAGAATTACTTGAACTGAAACTAATCGTTCCAAAAGAAA
GTTTGGTTTATTTTCTTATAGGAAAGGTTTGTTGCCCATAGATGCGTTGAATAAATCCCT
TATTATTAGTGACCTATTGGGGCTTACAATATGACTACCTATTAGGTTTATAAAGTCCTT
GGAGAGAATCACCTTGCAATGATGAATTTCTCATGGGCTCTTGACCTTGATCCGAAAGGA
ATCAATAACCACATCAAGGAAGCCATTGATAAACAACAAGGAGCAGATGACGGCTTTGAC
AGCAGTCATCTTGGTTCACAAACACGAGATGCAGATGAATCTGGAAGCACTGCTGACATT
ATGAATTCAATAATAGATGAAGTAGAATCTACTGAACACGAAATGCTTGCTGATAGTGAT
GAGAGTTTATGATATATTAACTACTCTAGTAATATTTGAAACTGTTTCGCATCATCCGCC
CACTGCGAATTACCTCTTTATCTGCTGAGAATTTTTCAGCTGAAGTGAAAAATACAGAAA
TAAATAAAGTGTAGGAAATTACCACACTGTTCATTTATAGAAAAAAACATTTAATAATAT
GTCATGCAATTTGGAAGTACAACAGATATAATAAACTCTGAAAGAAACAAAGGCAACAAA
A
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[11-183] 6.4E-41 - T[510-586] 9.7E-21 - T[587-719] 1.0E-45 - T[720-803] 1.0E-19 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[49-170] 4.95E-15 - T[510-580] 4.95E-15 - T[619-783] 1.14E-31 |
| SMART |
TPR_repeat (IPR019734) - T[129-162] 33.0 - T[554-587] 6.9 - T[622-655] 0.0023 - T[656-689] 0.13 - T[690-723] 3.1E-6 - T[724-757] 21.0 - T[758-791] 370.0 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[554-587] 7.788 - T[622-655] 9.116 - T[656-689] 8.88 - T[690-723] 10.502 - T[724-757] 7.7 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[554-791] 30.011 |
| Pfam |
TPR_repeat (IPR019734) - T[559-585] 0.027 |
| Pfam |
TPR_1 (IPR001440) - T[691-722] 1.7E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC23_HUMAN | 35.028 % | 109 | 7.69E-25 |
| CDC27_HUMAN | 44.891 % | 625 | 0 |