- Transcript 'KH2012:KH.C2.88.v2.A...' >
- Transcript 'KH2012:KH.C2.88.v1.A...' >
- Transcript 'KH2012:KH.C2.88.v5.A...'
Transcript Model
Transcript Id
KH2012:KH.C2.88.v5.A.ND1-1
Possible name(s)
CDC16; CDC23; CDC27
Gene model
Location
KhC2 [1,516,415 / 1,519,487]
Amino acid sequence
Length: 260
>KH.C2.88.v5.A.ND1-1
EIASPSAVTMKNAIKFFARAVQLDTHYAYAHTLLGHEYAYSDDNDRAMASYRRAIHCDKR
HYNAWYGIGSIYYKQENFSLAEIHFKKALSINRKSSVLLCHLGIVQHAQKRSSVALQTLA
NALTLEPRNPLCKFHRASILFATEQHKEALKELLELKLIVPKESLVYFLIGKVYKVLGEN
HLAMMNFSWALDLDPKGINNHIKEAIDKQQGADDGFDSSHLGSQTRDADESGSTADIMNS
IIDEVESTEHEMLADSDESL
Nucleotide sequence
Length: 1,354
>KH2012:KH.C2.88.v5.A.ND1-1
ATGGATTAATGTCACTCTTATGTGACATGGGCAAGGCACTGGTGGCCTTATGTCACTATG
ATTGTAGAAAAGCGATTTCCTGCATTGAATCTTTACCTTCAAATCAGCGTGATACATGTT
GGTCACTCTCACTACTTGCACGTGCCTATTTTGAAATGACCGAATATAAAAAGGCAGCAA
AAACATTCAATGAACTACGTTCCATGTTTCCTCACCAAGTATCTGGATTGGCTCTCTATA
GCACCACCTTATGGCATTTACAAGACAACATCGCACTGTGCACTCTTGCCCACGACCTTA
AGAATGTTGACCCCTTGTCTCCAGAGACATGGTGCTGCATAGGAAATTGCTTCTCCCTCC
GCCGTGACAATGAAAAATGCAATCAAATTTTTCGCACGAGCCGTGCAGCTTGACACACAT
TATGCATATGCTCATACACTACTAGGTCACGAATATGCATATAGTGATGACAATGATCGT
GCCATGGCAAGCTATAGGAGGGCTATACATTGTGATAAAAGGCATTATAATGCATGGTAT
GGAATTGGATCTATTTATTACAAACAAGAAAACTTTTCTCTTGCTGAAATTCATTTCAAG
AAAGCTTTGTCCATCAATCGAAAAAGTTCTGTGCTGTTATGTCATTTAGGGATTGTTCAG
CATGCACAGAAGCGTTCCTCTGTTGCTCTACAAACCTTAGCAAACGCACTCACCTTAGAA
CCACGGAATCCACTCTGCAAGTTCCATCGTGCCAGTATTTTATTTGCCACTGAGCAACAC
AAAGAAGCATTAAAAGAATTACTTGAACTGAAACTAATCGTTCCAAAAGAAAGTTTGGTT
TATTTTCTTATAGGAAAGGTTTATAAAGTCCTTGGAGAGAATCACCTTGCAATGATGAAT
TTCTCATGGGCTCTTGACCTTGATCCGAAAGGAATCAATAACCACATCAAGGAAGCCATT
GATAAACAACAAGGAGCAGATGACGGCTTTGACAGCAGTCATCTTGGTTCACAAACACGA
GATGCAGATGAATCTGGAAGCACTGCTGACATTATGAATTCAATAATAGATGAAGTAGAA
TCTACTGAACACGAAATGCTTGCTGATAGTGATGAGAGTTTATGATATATTAACTACTCT
AGTAATATTTGAAACTGTTTCGCATCATCCGCCCACTGCGAATTACCTCTTTATCTGCTG
AGAATTTTTCAGCTGAAGTGAAAAATACAGAAATAAATAAAGTGTAGGAAATTACCACAC
TGTTCATTTATAGAAAAAAACATTTAATAATATGTCATGCAATTTGGAAGTACAACAGAT
ATAATAAACTCTGAAAGAAACAAAGGCAACAAAA
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[1-197] 32.773 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[9-91] 3.9E-27 - T[92-195] 2.2E-30 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[11-198] 8.34E-32 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[28-61] 8.88 - T[62-95] 10.502 - T[96-129] 7.7 - T[164-197] 9.912 |
| SMART |
TPR_repeat (IPR019734) - T[28-61] 0.13 - T[62-95] 3.1E-6 - T[96-129] 21.0 - T[130-163] 370.0 - T[164-197] 1.5 |
| Pfam |
TPR_repeat (IPR019734) - T[29-55] 0.087 |
| Pfam |
TPR_1 (IPR001440) - T[63-94] 4.0E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC27_HUMAN | 63.913 % | 309 | 3.33E-100 |