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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C4.420.v1....'
  2. Transcript 'KH2012:KH.C1.264.v2....'
  3. Region 'REG00000846'
  4. Transcript 'KH2012:KH.C8.121.v3....'
  5. Transcript 'KH2012:KH.C2.97.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C2.97.v1.A.SL6-1

Possible name(s)

PARVA; PARVB; PARVG

Location

KhC2 [7,538,214 / 7,545,903]

Sequences

Amino acid sequence

Length: 355

>KH.C2.97.v1.A.SL6-1
KNCSLLSYAFVEMAFAKPWSTWGSMVADVSDLEQEGREAIDGSNGSVDYDPSSFHLEENE
ERTMIDKLSLEDPKVKELQKVLMEWINNSLVEQRIIVKDIQEDLFDGQVLQKLLEKLGNI
KLQECVPEVTQTDQGQKEKLTAVLDKVTEQGIGGWDEGKWSVDGIHSKSLVAILHLLVAL
ATHYHAPIRMPEKCSLKVIVITKREGKLDHKVVSVEITSTLEEMTGGRFERDAFDTLFDH
APDKLSLVKRLLIEFANRHLEKVNLTVTDLDTQFADGVYLILLMGLLEGYFVPLYGFSLT
PETFEAKVHNLQFAFELMQDAGLPKPKARPEDVANCELKSTLRVLYNLFTKYKRL

Nucleotide sequence

Length: 1,537

>KH2012:KH.C2.97.v1.A.SL6-1
ATGCCTGTTGTTTAGTGGAATAGAGAAGAAACGAGTTTTAAACAATATAGGGCGAAGTTT
TGGTGGATTTATTGAAAGAACTGTAGCCTACTGTCTTATGCATTCGTTGAGATGGCGTTT
GCAAAACCGTGGTCAACGTGGGGAAGTATGGTTGCTGATGTAAGTGACTTGGAACAAGAG
GGAAGGGAAGCCATCGACGGTTCCAATGGATCGGTCGATTACGATCCAAGTAGTTTCCAC
TTGGAAGAAAATGAAGAAAGAACGATGATCGATAAACTTTCACTGGAGGACCCGAAAGTG
AAGGAGTTACAAAAGGTTTTAATGGAGTGGATCAACAACAGCCTTGTAGAACAGAGGATT
ATTGTTAAAGATATTCAGGAAGATTTGTTTGATGGACAAGTGCTTCAAAAACTACTGGAA
AAACTTGGAAATATTAAGCTTCAGGAGTGCGTACCAGAAGTTACCCAAACTGACCAGGGA
CAAAAAGAGAAGCTGACAGCTGTACTTGATAAAGTTACTGAACAAGGAATTGGGGGTTGG
GATGAAGGAAAATGGAGTGTGGATGGTATTCACTCCAAGAGTTTGGTGGCCATTTTGCAT
CTTTTAGTTGCACTGGCAACACACTACCATGCACCAATTCGAATGCCAGAGAAATGTTCC
TTAAAGGTAATTGTGATCACAAAAAGAGAGGGAAAACTGGACCACAAAGTTGTTAGCGTT
GAAATCACATCCACACTCGAGGAGATGACAGGTGGCAGATTTGAGCGAGACGCGTTCGAC
ACTTTGTTTGATCACGCACCGGACAAACTAAGTCTTGTGAAGAGACTTCTCATAGAATTT
GCGAACCGCCATCTTGAAAAAGTCAATCTTACTGTTACTGATTTGGACACTCAGTTTGCA
GATGGCGTTTACCTCATTTTACTGATGGGTTTATTGGAGGGTTACTTTGTACCATTATAC
GGCTTCAGTTTAACACCAGAGACGTTTGAGGCTAAAGTTCACAATCTACAGTTTGCGTTT
GAACTTATGCAAGACGCTGGACTCCCTAAACCTAAAGCAAGACCTGAAGATGTCGCCAAC
TGCGAGCTCAAATCCACTCTCCGTGTTCTCTACAACCTGTTCACGAAATACAAGAGATTG
TGATGTCATAATAAAAACTACGATACCGCTTGGTGATATATGACGTCACAGGCCATTTAA
AGGGCCTAAACACACCCCACTTTAAGTTTAAAATCATGAAATATAATACCGTCTTTTTAT
TGTTTGTAAATATACAGTGTTTCTGAGGATAGTAAAGATGGGGAAAATGGGACACCTTTT
TTATTCGATTTTCTTATCGCATTTGGTAGTAAACAAAGAACATTTAAATATTTATAAAAC
CATATCCTTACGACTCCCAAAGACCGTTGTTAATTGTTAAACGCGATCACGTTATTCAGA
TATTATGAGCTAAAGGTGTCCCGTCTTACCCCACCGGTACTATATGTACATCATATAAAC
TTTGTTACACAGAATATATAACGCCGCACTAACTGTA

InterProScan

PIRSF
Parvin (IPR028433) - T[20-355] 8.8E-143
PANTHER
Parvin (IPR028433) - T[27-354] 3.6E-150
SUPERFAMILY
CH_dom_sf (IPR036872) - T[50-197] 2.16E-39 - T[244-353] 2.16E-39
Gene3D
CH_dom_sf (IPR036872) - T[56-186] 4.6E-15 - T[225-354] 1.5E-29
ProSiteProfiles
CH-domain (IPR001715) - T[76-185] 9.238 - T[246-353] 9.694
Pfam
CH-domain (IPR001715) - T[77-185] 5.1E-10 - T[249-353] 3.0E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PARVB_HUMAN 64.955 % 400 8.56E-140
PARVA_HUMAN 60.303 % 392 2.03E-136
PARVG_HUMAN 40.391 % 219 6.1E-69