- Transcript 'KH2012:KH.L96.112.v1...' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C5.298.v3....' >
- Transcript 'KH2012:KH.C1.144.v4....' >
- Transcript 'KH2012:KH.C2.973.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.973.v1.B.ND1-2
Possible name(s)
ZNF420; ZNF616; ZNF726
Gene model
Location
KhC2 [6,341,525 / 6,344,372]
Amino acid sequence
Length: 467
>KH.C2.973.v1.B.ND1-2
MSEEKEGETDHGSKIKHNNVHFGDKLFQCPKCGKCLSSEAGLRRHINREKKGKQFKCSTC
DRRFSMKARRDKHQKKHLGIVDTLYSCEFCPRTFGQSNHFTVHMKRHHTGKTVKSTTCKI
CHKVLASTASLKNHQKVHTGEKNHKCKTCGAQFTQSHSLNRHQVIHSGKKEFKCCVCKKS
FNQFGTLKRHREIHSGENAYECPKCKKVFSQKAAMFKGRSMIKRYKVHDGDETFQCRKCD
ECYSICRLCKRQYEYGTKKEHYKIHFGDKPLQCRKCGICFSRLDSLMRHIRREIKGKQFK
CSTCDLMFSTEVQRDTHQNKHLGYVDKTYSCEHCPRTFTQSNLFKMHMNNAHNDKPKEHV
CKVCNKVFANSFSLKSHKTVHTGEKPHKCETCGANFTQSHSLRRHQLIHSGEKPFKCSVC
NKSFNQLDTLKRHEEIHTGENSYKCSQCKIVFSQKAALKLHQRKEHK
Nucleotide sequence
Length: 1,658
>KH2012:KH.C2.973.v1.B.ND1-2
ATGAGTGAAGAAAAAGAGGGTGAAACAGACCATGGATCTAAGATAAAACATAACAATGTT
CATTTTGGGGATAAACTGTTTCAGTGTCCTAAATGTGGTAAATGTTTATCGAGCGAGGCT
GGGTTAAGGCGGCATATCAACAGAGAAAAGAAGGGGAAACAGTTTAAATGCTCCACGTGT
GATCGTAGGTTTTCCATGAAAGCCCGACGTGACAAACATCAGAAAAAGCATTTGGGGATT
GTGGATACACTCTACTCCTGCGAGTTTTGCCCAAGGACCTTTGGGCAAAGCAATCATTTC
ACGGTGCATATGAAACGTCATCACACCGGGAAAACAGTAAAAAGTACCACTTGCAAGATA
TGCCATAAAGTGCTTGCCAGCACCGCCAGTTTAAAGAATCATCAGAAAGTGCATACCGGA
GAAAAAAATCACAAATGTAAAACCTGTGGCGCCCAGTTTACCCAATCACATTCTTTGAAT
CGTCATCAGGTAATACATAGCGGGAAGAAGGAGTTTAAATGTTGCGTGTGTAAGAAGTCG
TTTAACCAGTTCGGTACATTAAAAAGACACAGAGAAATACATTCAGGCGAGAATGCGTAC
GAGTGTCCAAAGTGCAAGAAAGTGTTCAGTCAAAAAGCTGCAATGTTCAAAGGACGTTCC
ATGATAAAACGCTACAAAGTGCATGATGGAGATGAAACCTTTCAGTGCCGCAAATGTGAT
GAGTGTTATTCAATATGCAGGCTATGTAAGCGGCAGTACGAGTATGGTACTAAGAAAGAA
CATTACAAGATTCATTTTGGAGACAAACCGTTACAGTGCCGTAAATGCGGTATCTGTTTC
TCGCGCTTGGACAGTTTGATGCGGCATATCAGGAGAGAAATAAAAGGAAAACAATTCAAA
TGTTCAACATGTGACCTAATGTTTTCCACGGAGGTCCAGCGCGACACACACCAGAATAAG
CATTTAGGGTACGTGGACAAAACCTATTCATGCGAGCACTGCCCAAGGACCTTTACACAG
AGCAACCTGTTCAAGATGCATATGAACAATGCACATAACGACAAGCCAAAGGAACACGTT
TGTAAAGTTTGTAACAAAGTGTTTGCTAACAGCTTTAGCCTGAAGAGTCACAAGACAGTT
CACACCGGAGAAAAACCCCACAAGTGTGAAACCTGTGGCGCCAATTTTACCCAATCACAT
TCTTTACGTCGTCACCAGCTTATACATAGTGGAGAGAAGCCGTTTAAATGCTCCGTGTGC
AACAAGTCCTTTAACCAATTAGACACATTGAAAAGGCACGAAGAGATACACACTGGCGAG
AATTCTTACAAGTGTTCCCAGTGCAAGATCGTTTTCAGTCAAAAAGCTGCTTTGAAACTT
CACCAAAGAAAGGAGCACAAGTGAATAAACTAAAACGTTTAAAAAAGTAAAACATTTTGG
TTTTATTTTGATGACTTTTGCGCCCTGTATATAGACAACGGTTACGGACCCATCTTATTA
TAACTATATTCCTATAATTTCAACTAAGTTAGACTTCTGCCAAATACTTGTTATTGTCTG
TAGTACTTCAATCTGGTACATTCTAAACCACAGAGCATTGTTTGTGATTTGAATTAAGTT
GTTTGTCGTTTTCAGAAATAAAACAAACTTACAATTGA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[13-64] 2.64E-9 - T[53-107] 8.0E-9 - T[115-166] 2.59E-13 - T[153-209] 9.8E-16 - T[259-308] 8.36E-11 - T[297-348] 1.31E-8 - T[367-424] 1.02E-20 - T[409-461] 2.88E-17 |
| SMART |
Znf_C2H2_type (IPR013087) - T[27-47] 9.6 - T[55-77] 0.16 - T[85-107] 0.0022 - T[116-138] 0.065 - T[144-166] 0.026 - T[172-194] 0.032 - T[244-265] 140.0 - T[271-291] 16.0 - T[299-321] 0.3 - T[329-352] 0.012 - T[359-381] 0.0035 - T[387-409] 0.043 - T[415-437] 5.2E-4 - T[443-466] 6.5E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[27-55] 9.224 - T[55-79] 10.575 - T[85-113] 11.718 - T[116-143] 12.612 - T[144-171] 13.838 - T[172-199] 13.401 - T[200-233] 8.871 - T[271-298] 8.995 - T[299-326] 8.6 - T[329-357] 10.824 - T[359-386] 14.69 - T[387-414] 15.667 - T[415-442] 14.607 - T[443-467] 11.552 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[57-77] . - T[87-108] . - T[118-138] . - T[146-166] . - T[174-194] . - T[301-321] . - T[331-352] . - T[361-381] . - T[389-409] . - T[417-437] . - T[445-466] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN726_HUMAN | 36 % | 280 | 8.13E-87 |
| ZN616_HUMAN | 37.076 % | 287 | 5.66E-89 |
| ZN420_HUMAN | 36.526 % | 286 | 1.13E-89 |