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  1. Region 'REG00000118'
  2. Transcript 'KH2012:KH.C1.124.v3....'
  3. Clone 'ciad067c22'
  4. Transcript 'KH2012:KH.C2.973.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.973.v2.R.ND2-2

Possible name(s)

ZNF420; ZNF616; ZNF726

Location

KhC2 [6,341,525 / 6,342,654]

Sequences

Amino acid sequence

Length: 276

>KH.C2.973.v2.R.ND2-2
NLLGRQNMNKENIKGKICSLCQQKFKGRSMIKRYKVHDGDETFQCRKCDECYSICRLCKR
QYEYGTKKEHYKIHFGDKPLQCRKCGICFSRLDSLMRHIRREIKGKQFKCSTCDLMFSTE
VQRDTHQNKHLGYVDKTYSCEHCPRTFTQSNLFKMHMNNAHNDKPKEHVCKVCNKVFANS
FSLKSHKTVHTGEKPHKCETCGANFTQSHSLRRHQLIHSGEKPFKCSVCNKSFNQLDTLK
RHEEIHTGENSYKCSQCKIVFSQKAALKLHQRKEHK

Nucleotide sequence

Length: 1,129

>KH2012:KH.C2.973.v2.R.ND2-2
GTTTGGTATATAGATGGTGGAATTCAAACTTTAGATATTTGTGAAATTTGCTGGGAAGAC
AAAACATGAATAAAGAAAACATTAAGGGTAAGATATGCAGCTTGTGCCAGCAAAAGTTCA
AAGGACGTTCCATGATAAAACGCTACAAAGTGCATGATGGAGATGAAACCTTTCAGTGCC
GCAAATGTGATGAGTGTTATTCAATATGCAGGCTATGTAAGCGGCAGTACGAGTATGGTA
CTAAGAAAGAACATTACAAGATTCATTTTGGAGACAAACCGTTACAGTGCCGTAAATGCG
GTATCTGTTTCTCGCGCTTGGACAGTTTGATGCGGCATATCAGGAGAGAAATAAAAGGAA
AACAATTCAAATGTTCAACATGTGACCTAATGTTTTCCACGGAGGTCCAGCGCGACACAC
ACCAGAATAAGCATTTAGGGTACGTGGACAAAACCTATTCATGCGAGCACTGCCCAAGGA
CCTTTACACAGAGCAACCTGTTCAAGATGCATATGAACAATGCACATAACGACAAGCCAA
AGGAACACGTTTGTAAAGTTTGTAACAAAGTGTTTGCTAACAGCTTTAGCCTGAAGAGTC
ACAAGACAGTTCACACCGGAGAAAAACCCCACAAGTGTGAAACCTGTGGCGCCAATTTTA
CCCAATCACATTCTTTACGTCGTCACCAGCTTATACATAGTGGAGAGAAGCCGTTTAAAT
GCTCCGTGTGCAACAAGTCCTTTAACCAATTAGACACATTGAAAAGGCACGAAGAGATAC
ACACTGGCGAGAATTCTTACAAGTGTTCCCAGTGCAAGATCGTTTTCAGTCAAAAAGCTG
CTTTGAAACTTCACCAAAGAAAGGAGCACAAGTGAATAAACTAAAACGTTTAAAAAAGTA
AAACATTTTGGTTTTATTTTGATGACTTTTGCGCCCTGTATATAGACAACGGTTACGGAC
CCATCTTATTATAACTATATTCCTATAATTTCAACTAAGTTAGACTTCTGCCAAATACTT
GTTATTGTCTGTAGTACTTCAATCTGGTACATTCTAAACCACAGAGCATTGTTTGTGATT
TGAATTAAGTTGTTTGTCGTTTTCAGAAATAAAACAAACTTACAATTGA

InterProScan

SMART
Znf_C2H2_type (IPR013087) - T[53-74] 140.0 - T[80-100] 16.0 - T[108-130] 0.3 - T[138-161] 0.012 - T[168-190] 0.0035 - T[196-218] 0.043 - T[224-246] 5.2E-4 - T[252-275] 6.5E-4
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[68-117] 3.28E-11 - T[106-157] 8.32E-9 - T[176-233] 4.71E-21 - T[218-270] 6.37E-18
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[80-107] 8.995 - T[108-135] 8.6 - T[138-166] 10.824 - T[168-195] 14.69 - T[196-223] 15.667 - T[224-251] 14.607 - T[252-276] 11.552
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[110-130] . - T[140-161] . - T[170-190] . - T[198-218] . - T[226-246] . - T[254-275] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZN568_HUMAN 38.846 % 182 2.69E-53
ZN135_HUMAN 36.328 % 174 2.59E-50
ZN879_HUMAN 34.448 % 173 3.65E-50





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