- Transcript 'KH2012:KH.L170.28.v2...' >
- Clone 'ma002p23' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C3.87.v1.A...' >
- Transcript 'KH2012:KH.C3.101.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.101.v1.A.nonSL7-1
Possible name(s)
EXD1; EXOSC10
Gene model
Location
KhC3 [3,160,660 / 3,168,217]
Amino acid sequence
Length: 481
>KH.C3.101.v1.A.nonSL7-1
LVPLLSYKQSQLNCNSGNSAKNSLHCEMSVPAVKNEKNGKLGKNIKKPQLMFKDAVDNTH
ARFIPKISNKPNALKPLPKELVLLNSQDNISKNESNSLAISNLIHSEAVYDHPYQYELEN
FKPLSSQLEKPTPIKSGPVDTDSCIFVDGVNGLNMLIRELKQESEIAVDLEAHSFRSYQG
ITCLMQLSTRKTDYIVDTLALRANLNILNQVFTNPKIVKVFHGADQDIKWLQRDFGVYVV
NLFDTGQAARVLELGLSREYLLKHYCKVESDKKYQKADWRERPLSKDMLKYAQEDTHYLL
YIYDMMKLDLLEKAGGVGLMHKVIGNSRDICLLKYEKLIIDDTSHLKLLRKGAGKIEDWE
PQELEALRLIYMWRDELARQKDESCGYIMPNKMLVQIAKTLPQTVQDVRLQGVWQQYVPT
IHQLIVEARNKVFKSEPSSEPLHDSSNLGTTNDSKDPSTNKNFEIYLIIPILVAFAIYFF
F
Nucleotide sequence
Length: 1,952
>KH2012:KH.C3.101.v1.A.nonSL7-1
GTTTATGATTTCTTTTGGTTTGGTTAGAAACTCGTCAACAACATAGTCTGGAGTGGACGT
TACTTTGTCAAGGTTAGTTGGTACCCTTGCTTTCATACAAACAAAGTCAGTTGAATTGTA
ACAGCGGGAATTCTGCCAAGAACAGTTTACATTGTGAAATGAGTGTCCCTGCTGTGAAAA
ATGAAAAAAATGGAAAACTTGGAAAAAATATAAAGAAACCACAATTAATGTTTAAAGATG
CTGTAGATAACACTCATGCACGATTTATACCAAAGATATCAAACAAACCTAATGCATTAA
AACCATTGCCAAAAGAACTGGTTCTTCTTAATTCACAAGACAACATAAGTAAAAATGAAA
GCAATTCACTGGCTATATCCAACCTTATACACTCCGAAGCAGTATACGACCATCCATATC
AATATGAACTTGAAAATTTTAAGCCTTTATCCTCACAATTGGAAAAACCGACCCCCATCA
AATCAGGCCCAGTAGATACGGATTCATGTATATTTGTTGATGGGGTAAATGGACTAAATA
TGTTAATAAGGGAGCTGAAGCAAGAATCAGAGATAGCTGTTGATTTGGAAGCTCATTCAT
TCCGTTCCTATCAAGGAATAACTTGCCTAATGCAGTTGTCCACACGAAAAACAGATTACA
TTGTTGACACTCTTGCATTGAGGGCGAATTTAAATATTTTAAACCAAGTTTTCACAAATC
CAAAAATCGTGAAAGTTTTTCATGGAGCAGATCAAGATATTAAATGGTTACAACGAGACT
TTGGGGTTTATGTTGTAAATCTGTTTGACACAGGTCAAGCAGCGAGAGTATTAGAACTTG
GATTATCTCGCGAATACCTTCTGAAACATTATTGTAAAGTGGAATCGGACAAAAAGTACC
AGAAAGCTGATTGGAGGGAAAGACCTTTATCCAAAGACATGCTTAAATATGCACAGGAAG
ACACTCATTACTTGTTATATATATACGACATGATGAAATTGGATCTTTTGGAAAAAGCTG
GGGGTGTCGGGTTAATGCATAAAGTAATTGGTAATAGCCGTGATATCTGTTTATTGAAAT
ATGAAAAACTCATCATTGATGACACCTCGCATCTTAAACTGCTGAGAAAAGGAGCGGGTA
AAATAGAAGATTGGGAACCGCAGGAATTAGAAGCGTTAAGGTTGATATACATGTGGAGGG
ATGAGCTGGCAAGGCAGAAGGATGAGAGTTGCGGATATATAATGCCTAACAAGATGCTGG
TGCAAATAGCGAAGACATTGCCACAGACAGTACAGGATGTTCGACTACAAGGTGTTTGGC
AACAATATGTGCCGACTATCCATCAACTTATTGTTGAAGCACGAAATAAAGTGTTCAAGT
CAGAACCAAGCAGTGAACCTCTGCATGACAGCTCAAATTTGGGAACTACAAATGACAGCA
AAGACCCTTCAACAAACAAAAACTTTGAAATCTACTTGATTATCCCTATTCTTGTTGCTT
TTGCCATTTACTTTTTTTTTTAGTATAGAAACAAACTCTAACTCTGAAACATCTAGCATG
GAAATATATAAGGAGAAAATGCAGGGTTTAGAAAATGAGTTTCCTTTTCAAAACAACTGA
TTGTGGAAAGTTGACGGGTATATATTTTTAATGATTATCATATTAATATCGTTTTATTCT
TCCTTGTATTCTTAGCAGTAGGTTTATGCTTAGGTACAACTGTAGCGACCCGTTGTCTTA
TCATACCACGCAAGTTCTATGGTCACCAATGTTGACTTTGTTGTTTGATGTTGCCAGCCA
ACTTTTCCATTATCATGATATATTCGTTCAAACCGATATATTTTTAACGGGCGCTACTGC
GACCATCAGGTACAAATTTATTATGACGCTTTGTTAAAAACGTTTCAAACCTGACGTTTA
CATGTTAAAACTTCAGTTTTTGATTTAAAGCA
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[45-342] 4.55E-77 |
| SMART |
3'-5'_exonuclease_dom (IPR002562) - T[144-311] 4.2E-43 |
| Pfam |
3'-5'_exonuclease_dom (IPR002562) - T[150-309] 1.0E-43 |
| SUPERFAMILY |
HRDC-like_sf (IPR010997) - T[340-437] 1.44E-17 |
| ProSiteProfiles |
HRDC_dom (IPR002121) - T[360-439] 12.63 |
| SMART |
HRDC_dom (IPR002121) - T[360-437] 2.4E-7 |
| Pfam |
HRDC_dom (IPR002121) - T[364-409] 3.2E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EXOSX_HUMAN | 46.117 % | 359 | 2.64E-115 |