Login
Help

Submit your Data

  1. Transcript 'KH2012:KH.C5.42.v1.A...'
  2. Transcript 'Cisavi.CG.ENS81.R98....'
  3. Transcript 'Haaura.CG.MTP2014.S3...'
  4. Transcript 'Phmamm.CG.MTP2014.S1...'
  5. Transcript 'KH2012:KH.C3.101.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.101.v1.A.nonSL8-1

Possible name(s)

EXD1; EXOSC10

Location

KhC3 [3,160,660 / 3,168,173]

Sequences

Amino acid sequence

Length: 481

>KH.C3.101.v1.A.nonSL8-1
LVPLLSYKQSQLNCNSGNSAKNSLHCEMSVPAVKNEKNGKLGKNIKKPQLMFKDAVDNTH
ARFIPKISNKPNALKPLPKELVLLNSQDNISKNESNSLAISNLIHSEAVYDHPYQYELEN
FKPLSSQLEKPTPIKSGPVDTDSCIFVDGVNGLNMLIRELKQESEIAVDLEAHSFRSYQG
ITCLMQLSTRKTDYIVDTLALRANLNILNQVFTNPKIVKVFHGADQDIKWLQRDFGVYVV
NLFDTGQAARVLELGLSREYLLKHYCKVESDKKYQKADWRERPLSKDMLKYAQEDTHYLL
YIYDMMKLDLLEKAGGVGLMHKVIGNSRDICLLKYEKLIIDDTSHLKLLRKGAGKIEDWE
PQELEALRLIYMWRDELARQKDESCGYIMPNKMLVQIAKTLPQTVQDVRLQGVWQQYVPT
IHQLIVEARNKVFKSEPSSEPLHDSSNLGTTNDSKDPSTNKNFEIYLIIPILVAFAIYFF
F

Nucleotide sequence

Length: 1,908

>KH2012:KH.C3.101.v1.A.nonSL8-1
AGTCTGGAGTGGACGTTACTTTGTCAAGGTTAGTTGGTACCCTTGCTTTCATACAAACAA
AGTCAGTTGAATTGTAACAGCGGGAATTCTGCCAAGAACAGTTTACATTGTGAAATGAGT
GTCCCTGCTGTGAAAAATGAAAAAAATGGAAAACTTGGAAAAAATATAAAGAAACCACAA
TTAATGTTTAAAGATGCTGTAGATAACACTCATGCACGATTTATACCAAAGATATCAAAC
AAACCTAATGCATTAAAACCATTGCCAAAAGAACTGGTTCTTCTTAATTCACAAGACAAC
ATAAGTAAAAATGAAAGCAATTCACTGGCTATATCCAACCTTATACACTCCGAAGCAGTA
TACGACCATCCATATCAATATGAACTTGAAAATTTTAAGCCTTTATCCTCACAATTGGAA
AAACCGACCCCCATCAAATCAGGCCCAGTAGATACGGATTCATGTATATTTGTTGATGGG
GTAAATGGACTAAATATGTTAATAAGGGAGCTGAAGCAAGAATCAGAGATAGCTGTTGAT
TTGGAAGCTCATTCATTCCGTTCCTATCAAGGAATAACTTGCCTAATGCAGTTGTCCACA
CGAAAAACAGATTACATTGTTGACACTCTTGCATTGAGGGCGAATTTAAATATTTTAAAC
CAAGTTTTCACAAATCCAAAAATCGTGAAAGTTTTTCATGGAGCAGATCAAGATATTAAA
TGGTTACAACGAGACTTTGGGGTTTATGTTGTAAATCTGTTTGACACAGGTCAAGCAGCG
AGAGTATTAGAACTTGGATTATCTCGCGAATACCTTCTGAAACATTATTGTAAAGTGGAA
TCGGACAAAAAGTACCAGAAAGCTGATTGGAGGGAAAGACCTTTATCCAAAGACATGCTT
AAATATGCACAGGAAGACACTCATTACTTGTTATATATATACGACATGATGAAATTGGAT
CTTTTGGAAAAAGCTGGGGGTGTCGGGTTAATGCATAAAGTAATTGGTAATAGCCGTGAT
ATCTGTTTATTGAAATATGAAAAACTCATCATTGATGACACCTCGCATCTTAAACTGCTG
AGAAAAGGAGCGGGTAAAATAGAAGATTGGGAACCGCAGGAATTAGAAGCGTTAAGGTTG
ATATACATGTGGAGGGATGAGCTGGCAAGGCAGAAGGATGAGAGTTGCGGATATATAATG
CCTAACAAGATGCTGGTGCAAATAGCGAAGACATTGCCACAGACAGTACAGGATGTTCGA
CTACAAGGTGTTTGGCAACAATATGTGCCGACTATCCATCAACTTATTGTTGAAGCACGA
AATAAAGTGTTCAAGTCAGAACCAAGCAGTGAACCTCTGCATGACAGCTCAAATTTGGGA
ACTACAAATGACAGCAAAGACCCTTCAACAAACAAAAACTTTGAAATCTACTTGATTATC
CCTATTCTTGTTGCTTTTGCCATTTACTTTTTTTTTTAGTATAGAAACAAACTCTAACTC
TGAAACATCTAGCATGGAAATATATAAGGAGAAAATGCAGGGTTTAGAAAATGAGTTTCC
TTTTCAAAACAACTGATTGTGGAAAGTTGACGGGTATATATTTTTAATGATTATCATATT
AATATCGTTTTATTCTTCCTTGTATTCTTAGCAGTAGGTTTATGCTTAGGTACAACTGTA
GCGACCCGTTGTCTTATCATACCACGCAAGTTCTATGGTCACCAATGTTGACTTTGTTGT
TTGATGTTGCCAGCCAACTTTTCCATTATCATGATATATTCGTTCAAACCGATATATTTT
TAACGGGCGCTACTGCGACCATCAGGTACAAATTTATTATGACGCTTTGTTAAAAACGTT
TCAAACCTGACGTTTACATGTTAAAACTTCAGTTTTTGATTTAAAGCA

InterProScan

SUPERFAMILY
RNaseH-like_sf (IPR012337) - T[45-342] 4.55E-77
SMART
3'-5'_exonuclease_dom (IPR002562) - T[144-311] 4.2E-43
Pfam
3'-5'_exonuclease_dom (IPR002562) - T[150-309] 1.0E-43
SUPERFAMILY
HRDC-like_sf (IPR010997) - T[340-437] 1.44E-17
ProSiteProfiles
HRDC_dom (IPR002121) - T[360-439] 12.63
SMART
HRDC_dom (IPR002121) - T[360-437] 2.4E-7
Pfam
HRDC_dom (IPR002121) - T[364-409] 3.2E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EXOSX_HUMAN 46.117 % 359 2.64E-115





By clicking "SEND", you accept the terms of our Privacy Policy.

You may choose to prevent this website from aggregating and analyzing the actions you take here. Doing so will protect your privacy, but will also prevent the owner from learning from your actions and creating a better experience for you and other users.