Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.L18.90.v1....'
  2. Transcript 'KH2012:KH.L170.28.v5...'
  3. EST 'AHC0AAA226YD09_RM1'
  4. Molecular Tool 'cieg14g10-MO'
  5. Transcript 'KH2012:KH.C3.101.v2....'

Transcript Model

Transcript Id

KH2012:KH.C3.101.v2.A.nonSL7-1

Possible name(s)

EXD1; EXOSC10

Location

KhC3 [3,160,660 / 3,168,217]

Sequences

Amino acid sequence

Length: 394

>KH.C3.101.v2.A.nonSL7-1
DNISKNESNSLAISNLIHSEAVYDHPYQYELENFKPLSSQLEKPTPIKSGPVDTDSCIFV
DGVNGLNMLIRELKQESEIAVDLEAHSFRSYQGITCLMQLSTRKTDYIVDTLALRANLNI
LNQVFTNPKIVKVFHGADQDIKWLQRDFGVYVVNLFDTGQAARVLELGLSREYLLKHYCK
VESDKKYQKADWRERPLSKDMLKYAQEDTHYLLYIYDMMKLDLLEKAGGVGLMHKVIGNS
RDICLLKYEKLIIDDTSHLKLLRKGAGKIEDWEPQELEALRLIYMWRDELARQKDESCGY
IMPNKMLVQIAKTLPQTVQDVRLQGVWQQYVPTIHQLIVEARNKVFKSEPSSEPLHDSSN
LGTTNDSKDPSTNKNFEIYLIIPILVAFAIYFFF

Nucleotide sequence

Length: 1,776

>KH2012:KH.C3.101.v2.A.nonSL7-1
GTTTATGATTTCTTTTGGTTTGGTTAGAAACTCGTCAACAACATAGTCTGGAGTGGACGT
TACTTTGTCAAGGTTAGTTGGTACCCTTGCTTTCATACAAACAAAGTCAGTTGAATTGTA
ACAGCGGGAATTCTGCCAAGAACAGTTTACATTGTGAAATGAGACAACATAAGTAAAAAT
GAAAGCAATTCACTGGCTATATCCAACCTTATACACTCCGAAGCAGTATACGACCATCCA
TATCAATATGAACTTGAAAATTTTAAGCCTTTATCCTCACAATTGGAAAAACCGACCCCC
ATCAAATCAGGCCCAGTAGATACGGATTCATGTATATTTGTTGATGGGGTAAATGGACTA
AATATGTTAATAAGGGAGCTGAAGCAAGAATCAGAGATAGCTGTTGATTTGGAAGCTCAT
TCATTCCGTTCCTATCAAGGAATAACTTGCCTAATGCAGTTGTCCACACGAAAAACAGAT
TACATTGTTGACACTCTTGCATTGAGGGCGAATTTAAATATTTTAAACCAAGTTTTCACA
AATCCAAAAATCGTGAAAGTTTTTCATGGAGCAGATCAAGATATTAAATGGTTACAACGA
GACTTTGGGGTTTATGTTGTAAATCTGTTTGACACAGGTCAAGCAGCGAGAGTATTAGAA
CTTGGATTATCTCGCGAATACCTTCTGAAACATTATTGTAAAGTGGAATCGGACAAAAAG
TACCAGAAAGCTGATTGGAGGGAAAGACCTTTATCCAAAGACATGCTTAAATATGCACAG
GAAGACACTCATTACTTGTTATATATATACGACATGATGAAATTGGATCTTTTGGAAAAA
GCTGGGGGTGTCGGGTTAATGCATAAAGTAATTGGTAATAGCCGTGATATCTGTTTATTG
AAATATGAAAAACTCATCATTGATGACACCTCGCATCTTAAACTGCTGAGAAAAGGAGCG
GGTAAAATAGAAGATTGGGAACCGCAGGAATTAGAAGCGTTAAGGTTGATATACATGTGG
AGGGATGAGCTGGCAAGGCAGAAGGATGAGAGTTGCGGATATATAATGCCTAACAAGATG
CTGGTGCAAATAGCGAAGACATTGCCACAGACAGTACAGGATGTTCGACTACAAGGTGTT
TGGCAACAATATGTGCCGACTATCCATCAACTTATTGTTGAAGCACGAAATAAAGTGTTC
AAGTCAGAACCAAGCAGTGAACCTCTGCATGACAGCTCAAATTTGGGAACTACAAATGAC
AGCAAAGACCCTTCAACAAACAAAAACTTTGAAATCTACTTGATTATCCCTATTCTTGTT
GCTTTTGCCATTTACTTTTTTTTTTAGTATAGAAACAAACTCTAACTCTGAAACATCTAG
CATGGAAATATATAAGGAGAAAATGCAGGGTTTAGAAAATGAGTTTCCTTTTCAAAACAA
CTGATTGTGGAAAGTTGACGGGTATATATTTTTAATGATTATCATATTAATATCGTTTTA
TTCTTCCTTGTATTCTTAGCAGTAGGTTTATGCTTAGGTACAACTGTAGCGACCCGTTGT
CTTATCATACCACGCAAGTTCTATGGTCACCAATGTTGACTTTGTTGTTTGATGTTGCCA
GCCAACTTTTCCATTATCATGATATATTCGTTCAAACCGATATATTTTTAACGGGCGCTA
CTGCGACCATCAGGTACAAATTTATTATGACGCTTTGTTAAAAACGTTTCAAACCTGACG
TTTACATGTTAAAACTTCAGTTTTTGATTTAAAGCA

InterProScan

SUPERFAMILY
RNaseH-like_sf (IPR012337) - T[22-255] 3.58E-73
SMART
3'-5'_exonuclease_dom (IPR002562) - T[57-224] 4.2E-43
Pfam
3'-5'_exonuclease_dom (IPR002562) - T[63-222] 6.6E-44
SUPERFAMILY
HRDC-like_sf (IPR010997) - T[253-350] 1.02E-17
SMART
HRDC_dom (IPR002121) - T[273-350] 2.4E-7
ProSiteProfiles
HRDC_dom (IPR002121) - T[273-352] 12.63
Pfam
HRDC_dom (IPR002121) - T[277-322] 2.4E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EXOSX_HUMAN 47.309 % 321 3.92E-102