- Transcript 'KH2012:KH.C3.13.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C3.13.v1.A.SL2-1
Possible name(s)
CRIM1; FRAS1; SPON1
Gene model
Location
KhC3 [621,692 / 628,602]
Amino acid sequence
Length: 613
>KH.C3.13.v1.A.SL2-1
HLNIMIECLLSSKTATSGVRTVTSQWLLLLSIALVVQNTLGGIVRRSTDDDSYLPGLMDV
NLDVGTDIEANREPGNHHHRHHNRHHGPGNFTNVRVGHQHSEAERIAGVSFAEMCESGQM
EDQDTTTWSNVQCQNCSCEASVVVCRPNVCPNLPCGQPVTVQGQCCPVCPDKVCQAADGR
RFTEGAEWYLDDCTYCECKQGRALCSVEDCEYKSCENPVKVPGECCPICADASCHADSGR
NLSAGAVWKEGLCTHCYCRTGDQACAQEKCPQINCTHPYRRPNECCYTCQDAVECIVSTW
GTWGECPIQECGGGKRRRYRGVVIPPRNGGAFCPHMSEAQECPRQPCSDIPVCPTTEWGS
WSHCTATCGKGRRLRMRERAKVTRETMTSLIDCSQTHMQETMLCYTGTCNLSPILLDSAR
LEQEERCPGVYWSEWGPCSKSCGRGTRLRNQVLRNSSESIEGACRLLRELKECHGRNCTG
TADSPINCKVTHWSPWTVCSATCGETAAKSRHRTIIRHPSPGGRACPHLTVSKKCKLDPC
LTLRSLIRTQPSPHACVSDDGLTHYAENERWTPEECKTCVCMNSVKVCSDVFCSKPQCEH
PVKYPGFCCMFCE
Nucleotide sequence
Length: 2,309
>KH2012:KH.C3.13.v1.A.SL2-1
ATTTGTTAGGAAAACGAATTAAACTGTGTATAACATCTTAACATCATGATTGAATGTTTG
TTATCAAGTAAAACCGCCACATCGGGTGTAAGAACTGTTACTTCTCAATGGTTGTTGTTG
CTTTCGATTGCTTTAGTTGTTCAAAATACATTGGGTGGAATTGTGAGGCGATCCACCGAT
GATGATAGTTATCTACCTGGCTTGATGGATGTGAACCTGGATGTTGGAACCGACATTGAG
GCAAACAGGGAACCTGGAAACCACCATCATCGTCATCATAATCGACACCATGGACCTGGG
AATTTCACGAACGTGCGTGTCGGTCATCAGCATAGTGAAGCGGAGAGAATAGCCGGGGTG
TCATTCGCCGAGATGTGTGAAAGTGGTCAAATGGAGGACCAAGACACCACCACATGGAGC
AATGTACAATGTCAGAACTGTAGTTGTGAAGCAAGCGTGGTGGTGTGTCGGCCAAATGTG
TGTCCAAATCTACCATGCGGACAACCTGTAACGGTGCAAGGCCAATGCTGTCCTGTTTGT
CCAGATAAAGTTTGCCAGGCAGCAGATGGACGTCGTTTCACTGAAGGTGCGGAGTGGTAT
CTTGACGATTGTACTTACTGTGAATGTAAGCAGGGAAGAGCACTATGCTCGGTGGAAGAC
TGCGAGTACAAATCATGTGAAAATCCCGTTAAAGTTCCCGGTGAATGTTGCCCGATATGC
GCGGACGCTTCATGTCACGCGGATTCTGGAAGAAATCTGAGTGCTGGTGCCGTTTGGAAA
GAAGGTCTCTGCACACACTGCTACTGCCGAACCGGCGACCAAGCTTGCGCACAAGAAAAA
TGTCCTCAAATTAACTGCACGCACCCGTACAGACGACCGAATGAATGTTGCTACACATGT
CAAGATGCGGTTGAATGCATTGTGTCAACGTGGGGTACTTGGGGTGAATGTCCCATTCAG
GAATGTGGGGGTGGTAAGAGAAGGAGGTACAGAGGTGTGGTTATACCTCCACGAAACGGG
GGTGCGTTCTGTCCACATATGAGTGAAGCACAAGAATGTCCTCGACAGCCATGCAGTGAT
ATTCCGGTTTGTCCCACAACGGAGTGGGGTTCATGGAGCCACTGCACTGCTACTTGTGGA
AAGGGAAGACGACTGCGCATGCGCGAAAGGGCAAAGGTTACCAGGGAGACCATGACGTCA
TTAATAGACTGTTCGCAAACACACATGCAAGAAACAATGCTTTGTTATACTGGGACCTGC
AATCTGTCACCAATACTATTAGATAGTGCACGCCTTGAGCAGGAGGAAAGATGTCCTGGT
GTTTATTGGTCAGAGTGGGGTCCTTGTTCAAAATCCTGTGGTCGTGGAACAAGATTAAGA
AACCAAGTTCTTAGAAACTCCTCCGAATCCATTGAAGGTGCTTGTAGGTTGTTGCGGGAA
TTGAAGGAATGCCACGGCCGTAACTGTACGGGAACTGCTGATTCACCCATCAACTGCAAA
GTAACACACTGGAGCCCTTGGACAGTTTGTTCTGCTACTTGTGGAGAGACAGCAGCGAAG
AGTCGACACCGCACAATCATTAGACATCCATCACCCGGTGGAAGAGCTTGTCCTCATCTT
ACTGTGTCTAAGAAGTGTAAACTTGACCCTTGTCTCACCCTTCGATCATTAATACGTACA
CAACCATCACCGCACGCGTGTGTGTCCGATGACGGGTTAACTCACTACGCGGAAAATGAA
CGGTGGACGCCTGAAGAATGCAAGACATGCGTGTGCATGAACTCTGTCAAAGTTTGCAGC
GATGTGTTTTGTAGCAAGCCTCAATGCGAGCACCCAGTTAAATATCCGGGTTTCTGCTGC
ATGTTCTGCGAGTGAATATTAAGTAGATAGCGGCGCTATATACTTGACGATCGGATGGGC
GAACCACTTCCTGCAATGCTTCTGCTTCCGTGTACATCCGTATAGGAGAATATGTTGCAA
CTCCCATGCCTTTGCTTTGCGTATCTAGCGAGTTCATACCAGTTTTACAAAATCCAATGT
AATTTAAATCACCTTTCTTTGCCAAGAGCAGGCTCTAAGCAAAGGTTCCGAAATTTGTAT
TCTTTATTTATAAAGAAGCAAATCGGTTTGGTGAATTTTTTACAATTGCTGTTTGACAAA
ACAGTCTTGAGTATTTTGTTGTGCATGCAGCATTCCTTTGACATTTTATTAAGCTTTTGT
TCCAGTATGTTTCTGTTGTTAACCTTATATGTTCGTTGCTAAATTATACAAATGCATTTT
TGACGTTTTAATACAAATCTTACATTTTC
| ProSiteProfiles |
VWF_dom (IPR001007) - T[113-170] 10.171 - T[172-230] 11.109 - T[232-290] 9.853 - T[554-613] 10.344 |
| SMART |
VWF_dom (IPR001007) - T[115-169] 0.046 - T[174-229] 1.5E-7 - T[234-289] 6.5E-4 - T[556-612] 2.1E-5 |
| Pfam |
VWF_dom (IPR001007) - T[115-169] 1.2E-6 - T[177-229] 6.7E-9 - T[563-612] 9.4E-7 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[193-229] . - T[253-289] . - T[576-612] . |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[292-342] 1.6E-12 - T[351-409] 1.6E-7 - T[423-478] 9.5E-7 - T[486-535] 4.1E-12 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[293-342] 5.1E-8 - T[353-409] 1.83E-7 - T[426-478] 1.03E-6 - T[485-540] 6.28E-9 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[294-348] 10.633 - T[352-410] 9.793 - T[426-479] 9.629 - T[487-541] 10.639 |
| SMART |
TSP1_rpt (IPR000884) - T[297-348] 2.7E-8 - T[355-410] 4.5E-6 - T[430-479] 4.9E-6 - T[490-541] 1.1E-8 |
| Pfam |
TSP1_rpt (IPR000884) - T[298-347] 4.2E-6 - T[357-381] 7.1E-5 - T[432-478] 6.1E-7 - T[492-540] 5.8E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FRAS1_HUMAN | 36.571 % | 91.3 | 6.72E-19 |
| CRIM1_HUMAN | 33.511 % | 98.6 | 2.45E-21 |
| SPON1_HUMAN | 32.157 % | 110 | 5.12E-25 |