- Transcript 'KH2012:KH.C1.279.v3....' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'KH2012:KH.C3.13.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C3.13.v1.A.SL3-1
Possible name(s)
CRIM1; FRAS1; SPON1
Gene model
Location
KhC3 [621,692 / 628,466]
Amino acid sequence
Length: 578
>KH.C3.13.v1.A.SL3-1
VQNTLGGIVRRSTDDDSYLPGLMDVNLDVGTDIEANREPGNHHHRHHNRHHGPGNFTNVR
VGHQHSEAERIAGVSFAEMCESGQMEDQDTTTWSNVQCQNCSCEASVVVCRPNVCPNLPC
GQPVTVQGQCCPVCPDKVCQAADGRRFTEGAEWYLDDCTYCECKQGRALCSVEDCEYKSC
ENPVKVPGECCPICADASCHADSGRNLSAGAVWKEGLCTHCYCRTGDQACAQEKCPQINC
THPYRRPNECCYTCQDAVECIVSTWGTWGECPIQECGGGKRRRYRGVVIPPRNGGAFCPH
MSEAQECPRQPCSDIPVCPTTEWGSWSHCTATCGKGRRLRMRERAKVTRETMTSLIDCSQ
THMQETMLCYTGTCNLSPILLDSARLEQEERCPGVYWSEWGPCSKSCGRGTRLRNQVLRN
SSESIEGACRLLRELKECHGRNCTGTADSPINCKVTHWSPWTVCSATCGETAAKSRHRTI
IRHPSPGGRACPHLTVSKKCKLDPCLTLRSLIRTQPSPHACVSDDGLTHYAENERWTPEE
CKTCVCMNSVKVCSDVFCSKPQCEHPVKYPGFCCMFCE
Nucleotide sequence
Length: 2,173
>KH2012:KH.C3.13.v1.A.SL3-1
TTGTTCAAAATACATTGGGTGGAATTGTGAGGCGATCCACCGATGATGATAGTTATCTAC
CTGGCTTGATGGATGTGAACCTGGATGTTGGAACCGACATTGAGGCAAACAGGGAACCTG
GAAACCACCATCATCGTCATCATAATCGACACCATGGACCTGGGAATTTCACGAACGTGC
GTGTCGGTCATCAGCATAGTGAAGCGGAGAGAATAGCCGGGGTGTCATTCGCCGAGATGT
GTGAAAGTGGTCAAATGGAGGACCAAGACACCACCACATGGAGCAATGTACAATGTCAGA
ACTGTAGTTGTGAAGCAAGCGTGGTGGTGTGTCGGCCAAATGTGTGTCCAAATCTACCAT
GCGGACAACCTGTAACGGTGCAAGGCCAATGCTGTCCTGTTTGTCCAGATAAAGTTTGCC
AGGCAGCAGATGGACGTCGTTTCACTGAAGGTGCGGAGTGGTATCTTGACGATTGTACTT
ACTGTGAATGTAAGCAGGGAAGAGCACTATGCTCGGTGGAAGACTGCGAGTACAAATCAT
GTGAAAATCCCGTTAAAGTTCCCGGTGAATGTTGCCCGATATGCGCGGACGCTTCATGTC
ACGCGGATTCTGGAAGAAATCTGAGTGCTGGTGCCGTTTGGAAAGAAGGTCTCTGCACAC
ACTGCTACTGCCGAACCGGCGACCAAGCTTGCGCACAAGAAAAATGTCCTCAAATTAACT
GCACGCACCCGTACAGACGACCGAATGAATGTTGCTACACATGTCAAGATGCGGTTGAAT
GCATTGTGTCAACGTGGGGTACTTGGGGTGAATGTCCCATTCAGGAATGTGGGGGTGGTA
AGAGAAGGAGGTACAGAGGTGTGGTTATACCTCCACGAAACGGGGGTGCGTTCTGTCCAC
ATATGAGTGAAGCACAAGAATGTCCTCGACAGCCATGCAGTGATATTCCGGTTTGTCCCA
CAACGGAGTGGGGTTCATGGAGCCACTGCACTGCTACTTGTGGAAAGGGAAGACGACTGC
GCATGCGCGAAAGGGCAAAGGTTACCAGGGAGACCATGACGTCATTAATAGACTGTTCGC
AAACACACATGCAAGAAACAATGCTTTGTTATACTGGGACCTGCAATCTGTCACCAATAC
TATTAGATAGTGCACGCCTTGAGCAGGAGGAAAGATGTCCTGGTGTTTATTGGTCAGAGT
GGGGTCCTTGTTCAAAATCCTGTGGTCGTGGAACAAGATTAAGAAACCAAGTTCTTAGAA
ACTCCTCCGAATCCATTGAAGGTGCTTGTAGGTTGTTGCGGGAATTGAAGGAATGCCACG
GCCGTAACTGTACGGGAACTGCTGATTCACCCATCAACTGCAAAGTAACACACTGGAGCC
CTTGGACAGTTTGTTCTGCTACTTGTGGAGAGACAGCAGCGAAGAGTCGACACCGCACAA
TCATTAGACATCCATCACCCGGTGGAAGAGCTTGTCCTCATCTTACTGTGTCTAAGAAGT
GTAAACTTGACCCTTGTCTCACCCTTCGATCATTAATACGTACACAACCATCACCGCACG
CGTGTGTGTCCGATGACGGGTTAACTCACTACGCGGAAAATGAACGGTGGACGCCTGAAG
AATGCAAGACATGCGTGTGCATGAACTCTGTCAAAGTTTGCAGCGATGTGTTTTGTAGCA
AGCCTCAATGCGAGCACCCAGTTAAATATCCGGGTTTCTGCTGCATGTTCTGCGAGTGAA
TATTAAGTAGATAGCGGCGCTATATACTTGACGATCGGATGGGCGAACCACTTCCTGCAA
TGCTTCTGCTTCCGTGTACATCCGTATAGGAGAATATGTTGCAACTCCCATGCCTTTGCT
TTGCGTATCTAGCGAGTTCATACCAGTTTTACAAAATCCAATGTAATTTAAATCACCTTT
CTTTGCCAAGAGCAGGCTCTAAGCAAAGGTTCCGAAATTTGTATTCTTTATTTATAAAGA
AGCAAATCGGTTTGGTGAATTTTTTACAATTGCTGTTTGACAAAACAGTCTTGAGTATTT
TGTTGTGCATGCAGCATTCCTTTGACATTTTATTAAGCTTTTGTTCCAGTATGTTTCTGT
TGTTAACCTTATATGTTCGTTGCTAAATTATACAAATGCATTTTTGACGTTTTAATACAA
ATCTTACATTTTC
| ProSiteProfiles |
VWF_dom (IPR001007) - T[78-135] 10.171 - T[137-195] 11.109 - T[197-255] 9.853 - T[519-578] 10.344 |
| Pfam |
VWF_dom (IPR001007) - T[80-134] 1.1E-6 - T[142-194] 6.2E-9 - T[528-577] 8.7E-7 |
| SMART |
VWF_dom (IPR001007) - T[80-134] 0.046 - T[139-194] 1.5E-7 - T[199-254] 6.5E-4 - T[521-577] 2.1E-5 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[158-194] . - T[218-254] . - T[541-577] . |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[257-307] 1.4E-12 - T[316-374] 1.4E-7 - T[388-443] 8.8E-7 - T[451-500] 3.8E-12 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[258-307] 4.71E-8 - T[318-374] 1.7E-7 - T[391-443] 9.55E-7 - T[450-505] 5.89E-9 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[259-313] 10.633 - T[317-375] 9.793 - T[391-444] 9.629 - T[452-506] 10.639 |
| SMART |
TSP1_rpt (IPR000884) - T[262-313] 2.7E-8 - T[320-375] 4.5E-6 - T[395-444] 4.9E-6 - T[455-506] 1.1E-8 |
| Pfam |
TSP1_rpt (IPR000884) - T[263-312] 3.9E-6 - T[322-346] 6.6E-5 - T[397-443] 5.7E-7 - T[457-505] 5.4E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FRAS1_HUMAN | 36.571 % | 90.1 | 1.31E-18 |
| CRIM1_HUMAN | 33.511 % | 98.6 | 2.3E-21 |
| SPON1_HUMAN | 32.157 % | 109 | 5.65E-25 |