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  1. Transcript 'KH2012:KH.C3.199.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.199.v1.A.nonSL17-1

Possible name(s)

PSMC2; PSMC5; PSMC6

Location

KhC3 [2,293,782 / 2,299,417]

Sequences

Amino acid sequence

Length: 326

>KH.C3.199.v1.A.nonSL17-1
NNKILIMDAREKVLTDYRKKLLEHKEIDGRLKGLREDLKKKTKDYDKSENDLKALQSVGQ
IVGEILKQLTEEKFIVKATNGPRYVVGCRRQVDKSKLKSGTRVALDMTTLTIMRYLPREV
DPLVYNMSHEDPGDVKYSSIGGLSEQIRELREVIELPLLNPELFLRVGITPPKGCLLYGP
PGTGKTLLARAVSSQLDANFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEI
DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQVKMIMATNRPDTLDPALLRPGRL
DRKIRIDLPNEQVILIKLFILYFFIK

Nucleotide sequence

Length: 1,806

>KH2012:KH.C3.199.v1.A.nonSL17-1
TTTAGATTTCGTTTGTTTCAGCAAAGTGCTTTGGCTGAAATAACAAAATTTTAATAATGG
ATGCTCGTGAAAAAGTATTAACAGATTATCGTAAAAAACTGCTTGAACACAAAGAAATAG
ACGGACGATTAAAAGGCCTAAGAGAAGACTTAAAGAAGAAAACGAAGGATTATGACAAGT
CGGAAAATGATTTAAAGGCACTGCAAAGTGTTGGTCAAATTGTTGGAGAAATTTTAAAAC
AACTGACTGAAGAAAAATTTATTGTAAAAGCAACAAATGGTCCACGTTATGTTGTTGGGT
GCCGAAGACAGGTCGATAAATCAAAACTTAAATCTGGAACCAGGGTTGCTCTTGATATGA
CCACCCTTACTATAATGAGATATTTACCAAGAGAGGTTGATCCTCTTGTGTACAACATGT
CCCATGAAGATCCAGGTGATGTTAAATATTCAAGCATTGGAGGTTTATCTGAACAAATAA
GAGAACTAAGAGAGGTCATTGAACTTCCACTGCTGAATCCAGAATTATTTCTTCGTGTTG
GCATCACTCCCCCTAAAGGTTGTTTACTGTATGGTCCACCTGGCACTGGCAAGACACTGT
TGGCTCGTGCAGTGTCAAGTCAGTTAGATGCAAATTTCTTGAAGGTTGTGTCCTCATCTA
TTGTTGACAAATACATCGGAGAATCTGCTCGTTTAATCCGTGAGATGTTCAACTATGCAC
GTGATCACCAACCGTGCATCATATTCATGGATGAGATTGATGCAATTGGAGGAAGGAGGT
TCTCGGAGGGCACGAGCGCTGATCGTGAAATCCAACGTACTCTCATGGAGTTGCTCAACC
AGATGGATGGGTTTGATACTCTTGGTCAGGTTAAGATGATCATGGCTACCAACCGACCGG
ACACATTAGATCCAGCCTTACTAAGACCTGGTCGTCTTGACAGAAAGATTAGAATTGATC
TTCCTAATGAACAGGTAATTTTAATAAAATTATTTATTCTGTATTTTTTTATTAAATAAA
AAAAAATCTGTTTTTGGTTTAGATACTGAGACTGATTTAAAGTAAAAAGTGTTTATTAAG
TCATCAACCAATAAAAACCTTGTAAATATTATTAATGATATACCCTGGGTTAAAATGCAA
TAAATCATGTCTATGTGGATATCTGTAATTAAAATATATTAGAATTAATTGAACAGTGAT
TATTATCACATTTAAAGTGATTTTTTTTTAAATTATCATGCATCTAATAACCTCACACAT
CATGGCCAGGGTCGCATGGACATACTGAAAATTCACGCTGCTCCGATCACCAAGCATGGT
GAGATTGACTATGAGGCGGTCGTCAAACTATCCGATCAATTTAACGGCGCCGATCTACGT
AACGTGTGCACGGAAGCAGGGCTCTTTGCTATTCGGGCAGAGCGAGAATATGTGATACAA
GAAGACTTCATGAAGGCTGTACGCAAAGTTAGCGACAACAAGAAATTGGAGTCGAAATTC
GACTATAAACCGATATGATGACGTCACACAAATGGCTTTGTTTGAAGTCCTGAACTAAAA
TTTGGAAACACGGATTTAAAAAACTAAAAAAAAACGAGGAAAAACTAAAATAAGATTTAC
TTAAAATTCTCAGAATAGGTTATTTGTAGTTTGATTCGGACTGGAATATTAAAATTGTCG
TCGGTATCTCAGACACTATACGCTTCGTCGGGTGTCATATTTGTTCATCATTGTCACAAT
AAATAACATGTACGTTTACGTACGTATAACAAAATATACAAAAGCTGCTTAGGTAAAATT
TGTCGT

InterProScan

PANTHER
PSMC6 (IPR035263) - T[9-315] 4.0E-172
TIGRFAM
26S_Psome_P45-like (IPR005937) - T[25-312] 2.6E-107
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[134-314] 1.34E-52
SMART
AAA+_ATPase (IPR003593) - T[171-310] 9.9E-20
Pfam
ATPase_AAA_core (IPR003959) - T[176-307] 5.7E-43
ProSitePatterns
ATPase_AAA_CS (IPR003960) - T[278-296] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PRS7_HUMAN 54.202 % 278 4.87E-91
PRS8_HUMAN 51.751 % 270 1.44E-88
PRS10_HUMAN 90.968 % 573 0





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