- Transcript 'KH2012:KH.C3.199.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.199.v1.A.nonSL19-1
Possible name(s)
PSMC2; PSMC5; PSMC6
Gene model
Location
KhC3 [2,293,797 / 2,299,417]
Amino acid sequence
Length: 326
>KH.C3.199.v1.A.nonSL19-1
NNKILIMDAREKVLTDYRKKLLEHKEIDGRLKGLREDLKKKTKDYDKSENDLKALQSVGQ
IVGEILKQLTEEKFIVKATNGPRYVVGCRRQVDKSKLKSGTRVALDMTTLTIMRYLPREV
DPLVYNMSHEDPGDVKYSSIGGLSEQIRELREVIELPLLNPELFLRVGITPPKGCLLYGP
PGTGKTLLARAVSSQLDANFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEI
DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQVKMIMATNRPDTLDPALLRPGRL
DRKIRIDLPNEQVILIKLFILYFFIK
Nucleotide sequence
Length: 1,791
>KH2012:KH.C3.199.v1.A.nonSL19-1
TTTCAGCAAAGTGCTTTGGCTGAAATAACAAAATTTTAATAATGGATGCTCGTGAAAAAG
TATTAACAGATTATCGTAAAAAACTGCTTGAACACAAAGAAATAGACGGACGATTAAAAG
GCCTAAGAGAAGACTTAAAGAAGAAAACGAAGGATTATGACAAGTCGGAAAATGATTTAA
AGGCACTGCAAAGTGTTGGTCAAATTGTTGGAGAAATTTTAAAACAACTGACTGAAGAAA
AATTTATTGTAAAAGCAACAAATGGTCCACGTTATGTTGTTGGGTGCCGAAGACAGGTCG
ATAAATCAAAACTTAAATCTGGAACCAGGGTTGCTCTTGATATGACCACCCTTACTATAA
TGAGATATTTACCAAGAGAGGTTGATCCTCTTGTGTACAACATGTCCCATGAAGATCCAG
GTGATGTTAAATATTCAAGCATTGGAGGTTTATCTGAACAAATAAGAGAACTAAGAGAGG
TCATTGAACTTCCACTGCTGAATCCAGAATTATTTCTTCGTGTTGGCATCACTCCCCCTA
AAGGTTGTTTACTGTATGGTCCACCTGGCACTGGCAAGACACTGTTGGCTCGTGCAGTGT
CAAGTCAGTTAGATGCAAATTTCTTGAAGGTTGTGTCCTCATCTATTGTTGACAAATACA
TCGGAGAATCTGCTCGTTTAATCCGTGAGATGTTCAACTATGCACGTGATCACCAACCGT
GCATCATATTCATGGATGAGATTGATGCAATTGGAGGAAGGAGGTTCTCGGAGGGCACGA
GCGCTGATCGTGAAATCCAACGTACTCTCATGGAGTTGCTCAACCAGATGGATGGGTTTG
ATACTCTTGGTCAGGTTAAGATGATCATGGCTACCAACCGACCGGACACATTAGATCCAG
CCTTACTAAGACCTGGTCGTCTTGACAGAAAGATTAGAATTGATCTTCCTAATGAACAGG
TAATTTTAATAAAATTATTTATTCTGTATTTTTTTATTAAATAAAAAAAAATCTGTTTTT
GGTTTAGATACTGAGACTGATTTAAAGTAAAAAGTGTTTATTAAGTCATCAACCAATAAA
AACCTTGTAAATATTATTAATGATATACCCTGGGTTAAAATGCAATAAATCATGTCTATG
TGGATATCTGTAATTAAAATATATTAGAATTAATTGAACAGTGATTATTATCACATTTAA
AGTGATTTTTTTTTAAATTATCATGCATCTAATAACCTCACACATCATGGCCAGGGTCGC
ATGGACATACTGAAAATTCACGCTGCTCCGATCACCAAGCATGGTGAGATTGACTATGAG
GCGGTCGTCAAACTATCCGATCAATTTAACGGCGCCGATCTACGTAACGTGTGCACGGAA
GCAGGGCTCTTTGCTATTCGGGCAGAGCGAGAATATGTGATACAAGAAGACTTCATGAAG
GCTGTACGCAAAGTTAGCGACAACAAGAAATTGGAGTCGAAATTCGACTATAAACCGATA
TGATGACGTCACACAAATGGCTTTGTTTGAAGTCCTGAACTAAAATTTGGAAACACGGAT
TTAAAAAACTAAAAAAAAACGAGGAAAAACTAAAATAAGATTTACTTAAAATTCTCAGAA
TAGGTTATTTGTAGTTTGATTCGGACTGGAATATTAAAATTGTCGTCGGTATCTCAGACA
CTATACGCTTCGTCGGGTGTCATATTTGTTCATCATTGTCACAATAAATAACATGTACGT
TTACGTACGTATAACAAAATATACAAAAGCTGCTTAGGTAAAATTTGTCGT
| PANTHER |
PSMC6 (IPR035263) - T[9-315] 4.0E-172 |
| TIGRFAM |
26S_Psome_P45-like (IPR005937) - T[25-312] 2.6E-107 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[134-314] 1.34E-52 |
| SMART |
AAA+_ATPase (IPR003593) - T[171-310] 9.9E-20 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[176-307] 5.7E-43 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[278-296] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRS7_HUMAN | 54.202 % | 278 | 4.87E-91 |
| PRS8_HUMAN | 51.751 % | 270 | 1.44E-88 |
| PRS10_HUMAN | 90.968 % | 573 | 0 |