- Transcript 'KH2012:KH.C3.199.v2....'
Transcript Model
Transcript Id
KH2012:KH.C3.199.v2.A.nonSL2-1
Possible name(s)
PSMC2; PSMC5; PSMC6
Gene model
Location
KhC3 [2,293,780 / 2,299,417]
Amino acid sequence
Length: 394
>KH.C3.199.v2.A.nonSL2-1
NNKILIMDAREKVLTDYRKKLLEHKEIDGRLKGLREDLKKKTKDYDKSENDLKALQSVGQ
IVGEILKQLTEEKFIVKATNGPRYVVGCRRQVDKSKLKSGTRVALDMTTLTIMRYLPREV
DPLVYNMSHEDPGDVKYSSIGGLSEQIRELREVIELPLLNPELFLRVGITPPKGCLLYGP
PGTGKTLLARAVSSQLDANFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEI
DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQVKMIMATNRPDTLDPALLRPGRL
DRKIRIDLPNEQGRMDILKIHAAPITKHGEIDYEAVVKLSDQFNGADLRNVCTEAGLFAI
RAEREYVIQEDFMKAVRKVSDNKKLESKFDYKPI
Nucleotide sequence
Length: 1,513
>KH2012:KH.C3.199.v2.A.nonSL2-1
CATTTAGATTTCGTTTGTTTCAGCAAAGTGCTTTGGCTGAAATAACAAAATTTTAATAAT
GGATGCTCGTGAAAAAGTATTAACAGATTATCGTAAAAAACTGCTTGAACACAAAGAAAT
AGACGGACGATTAAAAGGCCTAAGAGAAGACTTAAAGAAGAAAACGAAGGATTATGACAA
GTCGGAAAATGATTTAAAGGCACTGCAAAGTGTTGGTCAAATTGTTGGAGAAATTTTAAA
ACAACTGACTGAAGAAAAATTTATTGTAAAAGCAACAAATGGTCCACGTTATGTTGTTGG
GTGCCGAAGACAGGTCGATAAATCAAAACTTAAATCTGGAACCAGGGTTGCTCTTGATAT
GACCACCCTTACTATAATGAGATATTTACCAAGAGAGGTTGATCCTCTTGTGTACAACAT
GTCCCATGAAGATCCAGGTGATGTTAAATATTCAAGCATTGGAGGTTTATCTGAACAAAT
AAGAGAACTAAGAGAGGTCATTGAACTTCCACTGCTGAATCCAGAATTATTTCTTCGTGT
TGGCATCACTCCCCCTAAAGGTTGTTTACTGTATGGTCCACCTGGCACTGGCAAGACACT
GTTGGCTCGTGCAGTGTCAAGTCAGTTAGATGCAAATTTCTTGAAGGTTGTGTCCTCATC
TATTGTTGACAAATACATCGGAGAATCTGCTCGTTTAATCCGTGAGATGTTCAACTATGC
ACGTGATCACCAACCGTGCATCATATTCATGGATGAGATTGATGCAATTGGAGGAAGGAG
GTTCTCGGAGGGCACGAGCGCTGATCGTGAAATCCAACGTACTCTCATGGAGTTGCTCAA
CCAGATGGATGGGTTTGATACTCTTGGTCAGGTTAAGATGATCATGGCTACCAACCGACC
GGACACATTAGATCCAGCCTTACTAAGACCTGGTCGTCTTGACAGAAAGATTAGAATTGA
TCTTCCTAATGAACAGGGTCGCATGGACATACTGAAAATTCACGCTGCTCCGATCACCAA
GCATGGTGAGATTGACTATGAGGCGGTCGTCAAACTATCCGATCAATTTAACGGCGCCGA
TCTACGTAACGTGTGCACGGAAGCAGGGCTCTTTGCTATTCGGGCAGAGCGAGAATATGT
GATACAAGAAGACTTCATGAAGGCTGTACGCAAAGTTAGCGACAACAAGAAATTGGAGTC
GAAATTCGACTATAAACCGATATGATGACGTCACACAAATGGCTTTGTTTGAAGTCCTGA
ACTAAAATTTGGAAACACGGATTTAAAAAACTAAAAAAAAACGAGGAAAAACTAAAATAA
GATTTACTTAAAATTCTCAGAATAGGTTATTTGTAGTTTGATTCGGACTGGAATATTAAA
ATTGTCGTCGGTATCTCAGACACTATACGCTTCGTCGGGTGTCATATTTGTTCATCATTG
TCACAATAAATAACATGTACGTTTACGTACGTATAACAAAATATACAAAAGCTGCTTAGG
TAAAATTTGTCGT
| PANTHER |
PSMC6 (IPR035263) - T[9-392] 1.8E-217 |
| TIGRFAM |
26S_Psome_P45-like (IPR005937) - T[25-379] 4.1E-133 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[134-385] 1.31E-66 |
| SMART |
AAA+_ATPase (IPR003593) - T[171-310] 9.9E-20 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[176-307] 8.6E-43 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[278-296] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRS7_HUMAN | 51.09 % | 341 | 8.33E-115 |
| PRS8_HUMAN | 50.156 % | 326 | 3.99E-109 |
| PRS10_HUMAN | 89.46 % | 718 | 0 |