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  1. Transcript 'KH2012:KH.C3.199.v2....'

Transcript Model

Transcript Id

KH2012:KH.C3.199.v2.A.nonSL23-1

Possible name(s)

PSMC2; PSMC5; PSMC6

Location

KhC3 [2,293,770 / 2,299,417]

Sequences

Amino acid sequence

Length: 394

>KH.C3.199.v2.A.nonSL23-1
NNKILIMDAREKVLTDYRKKLLEHKEIDGRLKGLREDLKKKTKDYDKSENDLKALQSVGQ
IVGEILKQLTEEKFIVKATNGPRYVVGCRRQVDKSKLKSGTRVALDMTTLTIMRYLPREV
DPLVYNMSHEDPGDVKYSSIGGLSEQIRELREVIELPLLNPELFLRVGITPPKGCLLYGP
PGTGKTLLARAVSSQLDANFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEI
DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQVKMIMATNRPDTLDPALLRPGRL
DRKIRIDLPNEQGRMDILKIHAAPITKHGEIDYEAVVKLSDQFNGADLRNVCTEAGLFAI
RAEREYVIQEDFMKAVRKVSDNKKLESKFDYKPI

Nucleotide sequence

Length: 1,523

>KH2012:KH.C3.199.v2.A.nonSL23-1
AAATTTTCAACATTTAGATTTCGTTTGTTTCAGCAAAGTGCTTTGGCTGAAATAACAAAA
TTTTAATAATGGATGCTCGTGAAAAAGTATTAACAGATTATCGTAAAAAACTGCTTGAAC
ACAAAGAAATAGACGGACGATTAAAAGGCCTAAGAGAAGACTTAAAGAAGAAAACGAAGG
ATTATGACAAGTCGGAAAATGATTTAAAGGCACTGCAAAGTGTTGGTCAAATTGTTGGAG
AAATTTTAAAACAACTGACTGAAGAAAAATTTATTGTAAAAGCAACAAATGGTCCACGTT
ATGTTGTTGGGTGCCGAAGACAGGTCGATAAATCAAAACTTAAATCTGGAACCAGGGTTG
CTCTTGATATGACCACCCTTACTATAATGAGATATTTACCAAGAGAGGTTGATCCTCTTG
TGTACAACATGTCCCATGAAGATCCAGGTGATGTTAAATATTCAAGCATTGGAGGTTTAT
CTGAACAAATAAGAGAACTAAGAGAGGTCATTGAACTTCCACTGCTGAATCCAGAATTAT
TTCTTCGTGTTGGCATCACTCCCCCTAAAGGTTGTTTACTGTATGGTCCACCTGGCACTG
GCAAGACACTGTTGGCTCGTGCAGTGTCAAGTCAGTTAGATGCAAATTTCTTGAAGGTTG
TGTCCTCATCTATTGTTGACAAATACATCGGAGAATCTGCTCGTTTAATCCGTGAGATGT
TCAACTATGCACGTGATCACCAACCGTGCATCATATTCATGGATGAGATTGATGCAATTG
GAGGAAGGAGGTTCTCGGAGGGCACGAGCGCTGATCGTGAAATCCAACGTACTCTCATGG
AGTTGCTCAACCAGATGGATGGGTTTGATACTCTTGGTCAGGTTAAGATGATCATGGCTA
CCAACCGACCGGACACATTAGATCCAGCCTTACTAAGACCTGGTCGTCTTGACAGAAAGA
TTAGAATTGATCTTCCTAATGAACAGGGTCGCATGGACATACTGAAAATTCACGCTGCTC
CGATCACCAAGCATGGTGAGATTGACTATGAGGCGGTCGTCAAACTATCCGATCAATTTA
ACGGCGCCGATCTACGTAACGTGTGCACGGAAGCAGGGCTCTTTGCTATTCGGGCAGAGC
GAGAATATGTGATACAAGAAGACTTCATGAAGGCTGTACGCAAAGTTAGCGACAACAAGA
AATTGGAGTCGAAATTCGACTATAAACCGATATGATGACGTCACACAAATGGCTTTGTTT
GAAGTCCTGAACTAAAATTTGGAAACACGGATTTAAAAAACTAAAAAAAAACGAGGAAAA
ACTAAAATAAGATTTACTTAAAATTCTCAGAATAGGTTATTTGTAGTTTGATTCGGACTG
GAATATTAAAATTGTCGTCGGTATCTCAGACACTATACGCTTCGTCGGGTGTCATATTTG
TTCATCATTGTCACAATAAATAACATGTACGTTTACGTACGTATAACAAAATATACAAAA
GCTGCTTAGGTAAAATTTGTCGT

InterProScan

PANTHER
PSMC6 (IPR035263) - T[9-392] 1.8E-217
TIGRFAM
26S_Psome_P45-like (IPR005937) - T[25-379] 4.1E-133
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[134-385] 1.31E-66
SMART
AAA+_ATPase (IPR003593) - T[171-310] 9.9E-20
Pfam
ATPase_AAA_core (IPR003959) - T[176-307] 8.6E-43
ProSitePatterns
ATPase_AAA_CS (IPR003960) - T[278-296] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PRS7_HUMAN 51.09 % 341 8.33E-115
PRS8_HUMAN 50.156 % 326 3.99E-109
PRS10_HUMAN 89.46 % 718 0





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