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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...' > 
  2. Transcript 'KH2012:KH.C3.213.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.213.v1.A.SL1-1

Possible name(s)

RANBP1; RANBP2; RGPD1

Gene model

KH2012:KH.C3.213

Location

KhC3 [3,356,172 / 3,359,917]

Sequences

Amino acid sequence

Length: 264

>KH.C3.213.v1.A.SL1-1
SSLYLIYSEFHQITSTRDPTMAENVEAKEPVEQPEVAVQQPEPVVQLPASVMPKLEEDED
VLFKMRAKLFRWAKEADPPEWKERGTGDIKILKHKETARIRLLMRRDKTFKICANHYITL
SMKLVSHCESERAWMWMATADFADEEAKEELFAIRFLNAENANKFKDKFCECQEMLKAAG
MQVWLNLAKMMSPDEVSSTEVSEDEKEAGEEEETKESKELTEKLDDLSVKDDKNKEVTKS
KEAGEKFVEKISQKDSTVEDSPEK

Nucleotide sequence

Length: 1,389

>KH2012:KH.C3.213.v1.A.SL1-1
GCTACCATTTAAACTAAAGCACTCTTTTTGATCTTCGTTGTACTTGATTTATTCTGAATT
TCATCAAATTACATCGACCCGTGATCCTACAATGGCAGAGAATGTTGAAGCAAAAGAGCC
CGTAGAACAACCAGAGGTTGCTGTACAGCAACCAGAGCCTGTCGTACAGTTACCCGCATC
AGTAATGCCTAAACTGGAAGAAGACGAAGACGTTTTATTTAAAATGAGGGCCAAGCTTTT
CCGGTGGGCAAAAGAAGCTGATCCACCTGAATGGAAAGAAAGAGGAACTGGAGATATAAA
GATTCTAAAGCACAAAGAAACAGCGAGAATTCGTTTACTAATGAGACGAGACAAGACATT
CAAAATCTGCGCTAATCACTATATAACCTTAAGCATGAAGCTTGTGTCGCATTGTGAGAG
TGAGCGAGCATGGATGTGGATGGCTACCGCAGATTTTGCCGATGAAGAAGCAAAAGAAGA
ATTATTTGCAATAAGATTTTTGAATGCTGAAAATGCAAATAAGTTTAAGGACAAGTTCTG
TGAATGTCAAGAAATGCTTAAAGCGGCAGGCATGCAAGTTTGGTTAAATCTCGCAAAAAT
GATGTCTCCAGATGAAGTATCAAGTACAGAGGTTTCTGAGGATGAAAAAGAAGCAGGGGA
AGAAGAGGAGACTAAAGAGAGCAAGGAGCTCACTGAGAAGTTGGATGATCTTAGTGTAAA
AGATGACAAGAACAAAGAGGTCACCAAATCAAAAGAGGCAGGAGAAAAATTTGTGGAAAA
AATTAGTCAAAAGGATTCAACAGTTGAAGACTCACCTGAAAAATAAATCTAAAAGCAAGA
ACAGGAAATACTTTGATGCTGCCAATGCCATGTGATTTTATTTCTCCACTTATGTCTTTT
GTTTTTGATTAACCTTTTCGGTATTTTTATGTTTTACTTTATGAAGTTGAAATTAAACAA
AATCCAACACAAGGCACATACACCATGAAAACTTAAACGTCCCACCATTACATTCTACCT
TAGATGCCAAATACCTTTTAATGTCAAGTTAGGCATATTTAGAAATACACTTAACCATGC
CTAATTGGTTGGTATGTGGACTAATTATCACACAATACTGCGGAAATTCCAGGGCGGTAT
GCTCACTCTGTCACCCCATCTTGGCACATGCATATTACCTCATAGTTTACATCCAAAAGC
GCAGAAATTTTTTTTTGAAAAGCCATAAGAATTTCATTTGCTTGAGCTCGTGTCACCACC
TATGGCTAACTGTCTAGGCCTGTGTTTGTCTAATTAATTATTTTTTTGTAGAAAAAAAAT
CTGACAATTGCTTAAATTTGGTATCAGCAACAATGTTTATAAAGTGCACAACTTCCACAT
TTAAAAATC

InterProScan

Gene3D
PH-like_dom_sf (IPR011993) - T[39-179] 9.5E-51
ProSiteProfiles
Ran_bind_dom (IPR000156) - T[40-178] 38.102
SMART
Ran_bind_dom (IPR000156) - T[41-172] 6.5E-49
Pfam
Ran_bind_dom (IPR000156) - T[55-174] 1.1E-46

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RBP2_HUMAN 53.147 % 138 5.99E-37
RGPD2_HUMAN 49.265 % 129 5.61E-34
RANG_HUMAN 54.404 % 188 4.62E-60