- Transcript 'KH2012:KH.C3.225.v13...'
Transcript Model
Transcript Id
KH2012:KH.C3.225.v13.C.SL2-1
Possible name(s)
FBN1; FBN2; FBN3
Gene model
Location
KhC3 [6,392,411 / 6,422,098]
Amino acid sequence
Length: 1,036
>KH.C3.225.v13.C.SL2-1
YRKGPCFHTRVNGTCKDEVPGVMCTKLFCCATVGEGWGHPCEECPARVGNCTKGRLPPLC
TDIDECEIMPGLCEGGTCRNTDGSFACDCPEGYRADTNIHQCVDVNECASSDVCVYGNCI
NTDGGFICECPPDYKLSIDKTYCISDKPGRCYTAIESGMCARPLSELVRRTMCCCTPTGE
ETLGKCFAAVGEFPERCPAVGTPEFNRDCEGVTTGEVIPGGGLCELMGDRACAHGRCVNQ
PEQHTYFCECEAGYESADGGKQCVDINECQEQQGLCDNGRCINSGGDFRCICNPGFFTSP
DSRSCLDINECHMNPCENGRCENSEGSFQCHCHRFQILDSTGTRCLLDVDECSKNLCSNG
ACRNTPGSYTCTCNEGYLLRGDVCEDIDECSIPGHCTGGTCFNTEGSYECVCPDGRSLGP
DGTKCIDVDECALRPNLCEPNGRCENMLGYYMCICDVGYIPTPDARDCVNRDECMEQMNR
CDGGTCENTDGAFRCVCFDGFMATADLQFCEDIDECAMNANVCMHGKCHNTRGSYTCNCE
PGYCVPQGQMICVDNDDCVEDDTLCGPHGQCMNIEGSFECNCPMGFVTTEDRKACKDVDE
CSDLANCINGMCVNTDGAYECQCPEGFQSNPTGIGCVDKNECDEEGQCNNGFCDNTPGGF
ACDCNEGYSVTPDGRVCIDTDECTEDPLVCGIGTCQNMDGSFKCYCPDGYNSDNGAACND
VDECGGQQSSCAGSCQNIPGSFRCLCSRGFRPTMYGRGCQDVNECAHSPCSQGQSCSNRV
GSFQCGCPSGLAKMRGGCGDVDECQMGGGSCNFGCRNSYGGFSCSCRGGFFRMGSGHCMS
GHFEQRVPRFPQFPQFGGYGGPQMGMPPNGGFQGAMRPKDSVCYACMPGGDTRRRHKRSA
DGGRFIEVSNRHGRGTVNTSYPLEVHLNRATLTRRTPILELQPSLKQLRNNVRYRIVSGN
DDRKFRLNPRGSSSVLHFTEEGLQQDLAGVASELTIRGSTTLSKDEVKQVALDSDLLEKA
IEDILEFHVQIHVNQP
Nucleotide sequence
Length: 3,470
>KH2012:KH.C3.225.v13.C.SL2-1
ATTACCGAAAGGGCCCATGTTTCCACACACGAGTTAACGGGACCTGCAAAGACGAAGTTC
CAGGGGTTATGTGTACCAAGCTCTTCTGTTGTGCTACTGTGGGAGAAGGATGGGGCCATC
CGTGCGAGGAATGTCCCGCCCGAGTCGGAAATTGTACCAAGGGTAGACTACCCCCTCTGT
GCACAGACATTGATGAGTGCGAAATAATGCCGGGTCTTTGCGAGGGAGGAACTTGCAGAA
ATACTGACGGATCTTTTGCCTGTGATTGCCCTGAAGGGTACAGAGCTGACACTAATATTC
ACCAGTGCGTAGATGTGAACGAATGCGCAAGCTCCGATGTCTGCGTCTACGGCAACTGTA
TCAACACGGATGGAGGCTTTATATGCGAATGCCCGCCAGATTACAAACTCTCAATTGACA
AGACATACTGCATATCTGATAAACCCGGACGATGTTACACCGCCATTGAAAGTGGTATGT
GCGCAAGACCCTTGTCTGAGTTGGTACGACGGACTATGTGTTGTTGCACCCCTACTGGGG
AGGAAACACTTGGAAAATGTTTTGCCGCGGTTGGGGAGTTCCCCGAACGATGCCCTGCTG
TTGGGACACCGGAGTTCAACAGAGATTGCGAAGGTGTAACAACCGGCGAAGTTATACCTG
GCGGTGGACTTTGTGAGCTTATGGGTGATCGCGCATGCGCACACGGTCGATGCGTCAACC
AACCAGAACAACATACTTACTTCTGTGAGTGCGAGGCCGGCTACGAATCAGCGGACGGTG
GAAAGCAATGTGTTGACATCAACGAATGCCAAGAACAACAAGGACTATGCGATAACGGAC
GTTGTATAAATAGCGGCGGAGACTTCAGGTGCATCTGCAACCCCGGGTTCTTTACCTCTC
CTGACTCAAGATCGTGTCTTGATATCAATGAATGCCACATGAATCCTTGTGAAAATGGTC
GATGTGAAAACTCTGAAGGTTCCTTCCAATGTCATTGCCACCGATTCCAGATTCTCGATT
CAACTGGAACACGATGTTTACTTGATGTTGACGAATGCTCAAAGAACCTTTGTAGCAACG
GAGCTTGTAGGAACACCCCAGGATCTTACACATGTACCTGCAATGAGGGATACCTCCTTC
GTGGGGATGTGTGTGAAGATATTGATGAATGCTCCATCCCCGGCCACTGCACTGGAGGTA
CTTGCTTCAACACTGAGGGAAGTTATGAATGTGTTTGTCCAGATGGAAGATCATTGGGAC
CAGATGGAACCAAATGTATTGATGTTGATGAATGTGCATTGAGACCCAATCTATGTGAAC
CTAACGGTAGATGTGAGAACATGTTAGGATACTACATGTGTATATGTGATGTTGGCTACA
TTCCTACACCCGATGCCAGGGATTGTGTCAATCGTGATGAATGTATGGAACAAATGAACA
GATGTGACGGCGGTACTTGTGAAAATACCGATGGTGCTTTTAGATGCGTCTGCTTTGATG
GATTTATGGCAACTGCTGATTTACAGTTCTGTGAAGATATCGATGAATGTGCAATGAATG
CAAACGTGTGTATGCACGGCAAATGTCACAACACCAGAGGATCATACACATGTAACTGCG
AACCTGGATATTGCGTTCCACAAGGACAAATGATCTGTGTTGACAATGACGATTGTGTTG
AGGATGATACGTTATGTGGACCTCATGGGCAGTGCATGAACATCGAGGGAAGTTTTGAAT
GTAATTGTCCCATGGGATTCGTTACAACAGAAGATAGGAAGGCTTGCAAGGATGTTGATG
AATGCTCAGATCTTGCCAACTGTATCAATGGTATGTGCGTCAACACCGACGGCGCATATG
AGTGTCAATGTCCAGAAGGTTTCCAGAGTAACCCTACAGGCATTGGTTGTGTTGACAAGA
ATGAATGTGATGAAGAAGGCCAATGTAACAATGGTTTCTGTGACAACACACCTGGTGGAT
TTGCATGCGATTGTAATGAAGGATATTCAGTAACACCTGACGGCAGAGTTTGTATTGATA
CTGATGAATGTACAGAAGATCCATTAGTGTGTGGTATTGGTACTTGCCAGAACATGGATG
GTTCTTTCAAATGTTATTGCCCTGATGGTTACAACAGTGATAATGGTGCAGCTTGTAATG
ATGTTGATGAATGTGGCGGGCAACAAAGCTCGTGCGCTGGAAGTTGCCAGAACATCCCAG
GTTCCTTCAGATGTCTTTGTTCCCGAGGTTTCCGACCCACTATGTACGGTAGAGGTTGCC
AAGATGTGAACGAATGCGCTCACAGCCCGTGCTCGCAAGGACAAAGCTGTTCCAACAGGG
TTGGATCGTTCCAATGTGGATGTCCATCAGGATTGGCGAAGATGCGCGGAGGATGCGGTG
ACGTTGATGAGTGCCAGATGGGAGGAGGAAGCTGCAACTTTGGATGCCGAAATAGTTACG
GAGGATTCTCTTGCAGCTGCAGAGGTGGTTTCTTCCGCATGGGCAGTGGACATTGCATGA
GCGGCCACTTTGAACAAAGAGTTCCAAGATTCCCACAATTCCCTCAGTTTGGTGGCTACG
GTGGTCCACAGATGGGCATGCCTCCAAATGGTGGATTCCAGGGTGCTATGAGGCCCAAGG
ATAGCGTGTGCTATGCGTGCATGCCAGGTGGTGACACACGACGTAGACATAAGAGGTCTG
CTGATGGTGGAAGATTTATCGAAGTTTCGAACCGTCATGGCAGAGGAACTGTCAACACCA
GCTACCCCCTTGAGGTTCACCTGAATCGCGCCACACTCACACGCCGCACACCCATCTTGG
AGCTGCAACCTTCCCTGAAACAACTTCGCAACAACGTCCGTTACCGCATCGTGTCCGGAA
ACGACGATCGCAAATTCCGTCTCAACCCACGAGGAAGCTCCAGCGTCCTCCACTTCACCG
AGGAAGGTCTTCAACAAGATCTCGCCGGAGTCGCAAGTGAGCTCACCATCCGAGGATCAA
CAACCTTAAGCAAGGATGAAGTGAAGCAAGTTGCTCTCGACAGCGATCTTCTTGAGAAAG
CTATTGAAGATATCCTGGAGTTCCACGTCCAGATCCATGTCAACCAGCCTTAGATTTCTC
TTCACCACTGGACAGATTATTTAATAGGACTGGCGGCTTGTAGAAAAACTGCATCCGCCT
TAAATTTGGTTTTGTGTTTGACTATAAGCGATTACGTCATTTTAGTGTCATTACTACGTA
TTTTGACACGTCATCACTATTTAGCGCCGCACATAACGTATAACCCTCCATGAAAATTTT
TCAAGCGAAAAAAAACACCTTTCACACTAACGTCTGCCTGTAACTACCGAAACTTTTCAG
TGGTCTATAAATGCAGCATATTTCTTATTGTTTTATAGGCTAATTGTATCGCTTTGTGCC
TTAATTGTACATAGGTATAACCGTTGCAGCCGTTTTCTATGCTACACAGT
| SUPERFAMILY |
TB_dom_sf (IPR036773) - T[2-80] 1.61E-12 - T[141-211] 2.09E-7 |
| Gene3D |
TB_dom_sf (IPR036773) - T[3-64] 4.0E-10 |
| ProSiteProfiles |
TB_dom (IPR017878) - T[4-47] 13.151 - T[149-209] 13.771 |
| Pfam |
TB_dom (IPR017878) - T[15-47] 1.5E-6 - T[159-210] 1.9E-9 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[62-102] 3.0E-9 - T[104-143] 2.3E-6 - T[265-305] 4.3E-7 - T[307-335] 1.5E-4 - T[348-378] 3.2E-6 - T[386-425] 1.5E-8 - T[427-468] 1.7E-8 - T[472-506] 2.3E-6 - T[512-545] 3.0E-8 - T[554-595] 3.6E-6 - T[597-636] 2.8E-8 - T[638-677] 2.1E-4 - T[679-718] 6.9E-7 - T[720-756] 3.5E-8 - T[761-792] 2.7E-7 - T[800-834] 5.9E-5 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[62-103] 2.6E-10 - T[104-144] 1.4E-8 - T[206-264] 0.23 - T[265-306] 6.0E-10 - T[307-346] 1.2E-7 - T[348-385] 1.7E-11 - T[386-426] 6.4E-8 - T[427-469] 3.2E-9 - T[470-511] 6.3E-7 - T[512-553] 5.3E-10 - T[554-596] 1.4E-7 - T[597-637] 2.2E-9 - T[638-678] 6.7E-6 - T[679-719] 9.6E-7 - T[720-760] 4.9E-9 - T[761-799] 8.2E-9 - T[800-839] 1.7E-5 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[62-103] 11.187 - T[104-144] 9.984 - T[220-264] 7.233 - T[265-306] 10.092 - T[307-346] 13.135 - T[348-385] 14.483 - T[386-426] 11.134 - T[427-469] 12.803 - T[470-511] 9.459 - T[512-549] 9.953 - T[554-596] 10.814 - T[597-637] 9.731 - T[638-678] 8.906 - T[679-716] 8.459 - T[720-760] 8.698 - T[761-797] 10.883 |
| SMART |
EGF-like_dom (IPR000742) - T[65-103] 6.6E-4 - T[107-144] 1.1E-4 - T[223-264] 0.027 - T[268-306] 2.4E-4 - T[310-346] 0.084 - T[351-385] 2.9E-6 - T[389-426] 0.011 - T[430-469] 0.085 - T[473-511] 0.017 - T[515-553] 0.0019 - T[557-596] 0.004 - T[600-637] 0.0018 - T[641-678] 0.2 - T[682-719] 0.087 - T[723-760] 4.5 - T[764-799] 0.11 - T[803-839] 43.0 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[78-89] . - T[119-130] . - T[281-292] . - T[321-332] . - T[362-373] . - T[401-412] . - T[444-455] . - T[486-497] . - T[528-539] . - T[571-582] . - T[612-623] . - T[653-664] . - T[695-706] . - T[735-746] . - T[776-787] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[87-102] . - T[248-263] . - T[290-305] . - T[371-384] . - T[453-468] . - T[495-510] . - T[580-595] . - T[621-636] . - T[662-677] . - T[744-759] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[104-128] . - T[265-290] . - T[427-453] . - T[554-580] . - T[761-785] . - T[800-824] . |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[223-352] 3.3E-13 - T[352-470] 1.29E-14 - T[429-558] 1.51E-13 - T[546-644] 7.38E-10 - T[644-761] 5.34E-13 - T[729-839] 1.04E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBN1_HUMAN | 35.867 % | 415 | 7.35E-123 |
| FBN2_HUMAN | 30.788 % | 425 | 2.43E-126 |
| LTBP4_HUMAN | 36.768 % | 419 | 1.31E-125 |