- Transcript 'KH2012:KH.C8.163.v3....' >
- Transcript 'KH2012:KH.L95.1.v2.A...' >
- Transcript 'KH2012:KH.C3.225.v2....' >
- Transcript 'KH2012:KH.C3.225.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.225.v1.C.ND1-1
Possible name(s)
FBN1; FBN2; FBN3
Gene model
Location
KhC3 [6,392,411 / 6,425,024]
Amino acid sequence
Length: 1,169
>KH.C3.225.v1.C.ND1-1
SLTGRHVCHEKGSTFCCPGWTASTSGKTCSIPKCDEGNCGPRGVCVSPNRCMCQDGQTQM
RCQREDAEDRRCNMRCMNGGECVDNQCRCPYGYTGPHCGQPICGPGCLNGGRCIAPGRCA
CVYGFTGMRCERDYRKGPCFHTRVNGTCKDEVPGVMCTKLFCCATVGEGWGHPCEECPAR
VGNCTKGRLPPLCTDIDECEIMPGLCEGGTCRNTDGSFACDCPEGYRADTNIHQCVDVNE
CASSDVCVYGNCINTDGGFICECPPDYKLSIDKTYCISDKPGRCYTAIESGMCARPLSEL
VRRTMCCCTPTGEETLGKCFAAVGEFPERCPAVGTPEFNRDCEGVTTGEVIPGGGLCELM
GDRACAHGRCVNQPEQHTYFCECEAGYESADGGKQCVDINECQEQQGLCDNGRCINSGGD
FRCICNPGFFTSPDSRSCLDINECHMNPCENGRCENSEGSFQCHCHRFQILDSTGTRCLL
DVDECSKNLCSNGACRNTPGSYTCTCNEGYLLRGDVCEDIDECSIPGHCTGGTCFNTEGS
YECVCPDGRSLGPDGTKCIDVDECALRPNLCEPNGRCENMLGYYMCICDVGYIPTPDARD
CVNRDECMEQMNRCDGGTCENTDGAFRCVCFDGFMATADLQFCEDIDECAMNANVCMHGK
CHNTRGSYTCNCEPGYCVPQGQMICVDNDDCVEDDTLCGPHGQCMNIEGSFECNCPMGFV
TTEDRKACKDVDECSDLANCINGMCVNTDGAYECQCPEGFQSNPTGIGCVDKNECDEEGQ
CNNGFCDNTPGGFACDCNEGYSVTPDGRVCIDTDECTEDPLVCGIGTCQNMDGSFKCYCP
DGYNSDNGAACNDVDECGGQQSSCAGSCQNIPGSFRCLCSRGFRPTMYGRGCQDVNECAH
SPCSQGQSCSNRVGSFQCGCPSGLAKMRGGCGDVDECQMGGGSCNFGCRNSYGGFSCSCR
GGFFRMGSGHCMSGHFEQRVPRFPQFPQFGGYGGPQMGMPPNGGFQGAMRPKDSVCYACM
PGGDTRRRHKRSADGGRFIEVSNRHGRGTVNTSYPLEVHLNRATLTRRTPILELQPSLKQ
LRNNVRYRIVSGNDDRKFRLNPRGSSSVLHFTEEGLQQDLAGVASELTIRGSTTLSKDEV
KQVALDSDLLEKAIEDILEFHVQIHVNQP
Nucleotide sequence
Length: 3,867
>KH2012:KH.C3.225.v1.C.ND1-1
AGTTTGACAGGCCGTCATGTTTGCCATGAAAAAGGTTCCACCTTCTGTTGCCCTGGTTGG
ACAGCTTCTACAAGCGGAAAGACTTGCTCAATACCCAAATGTGACGAAGGAAACTGTGGG
CCTCGTGGAGTTTGTGTCTCACCGAACAGATGTATGTGTCAGGACGGTCAAACACAAATG
AGGTGCCAGAGAGAAGACGCCGAAGACCGAAGATGTAACATGCGTTGTATGAACGGAGGG
GAGTGTGTGGACAACCAATGCAGATGTCCATACGGTTACACTGGACCACACTGTGGACAA
CCCATTTGTGGACCTGGTTGTCTCAACGGAGGAAGATGTATTGCTCCAGGAAGATGTGCT
TGTGTATATGGATTCACCGGGATGCGGTGCGAGAGAGATTACCGAAAGGGCCCATGTTTC
CACACACGAGTTAACGGGACCTGCAAAGACGAAGTTCCAGGGGTTATGTGTACCAAGCTC
TTCTGTTGTGCTACTGTGGGAGAAGGATGGGGCCATCCGTGCGAGGAATGTCCCGCCCGA
GTCGGAAATTGTACCAAGGGTAGACTACCCCCTCTGTGCACAGACATTGATGAGTGCGAA
ATAATGCCGGGTCTTTGCGAGGGAGGAACTTGCAGAAATACTGACGGATCTTTTGCCTGT
GATTGCCCTGAAGGGTACAGAGCTGACACTAATATTCACCAGTGCGTAGATGTGAACGAA
TGCGCAAGCTCCGATGTCTGCGTCTACGGCAACTGTATCAACACGGATGGAGGCTTTATA
TGCGAATGCCCGCCAGATTACAAACTCTCAATTGACAAGACATACTGCATATCTGATAAA
CCCGGACGATGTTACACCGCCATTGAAAGTGGTATGTGCGCAAGACCCTTGTCTGAGTTG
GTACGACGGACTATGTGTTGTTGCACCCCTACTGGGGAGGAAACACTTGGAAAATGTTTT
GCCGCGGTTGGGGAGTTCCCCGAACGATGCCCTGCTGTTGGGACACCGGAGTTCAACAGA
GATTGCGAAGGTGTAACAACCGGCGAAGTTATACCTGGCGGTGGACTTTGTGAGCTTATG
GGTGATCGCGCATGCGCACACGGTCGATGCGTCAACCAACCAGAACAACATACTTACTTC
TGTGAGTGCGAGGCCGGCTACGAATCAGCGGACGGTGGAAAGCAATGTGTTGACATCAAC
GAATGCCAAGAACAACAAGGACTATGCGATAACGGACGTTGTATAAATAGCGGCGGAGAC
TTCAGGTGCATCTGCAACCCCGGGTTCTTTACCTCTCCTGACTCAAGATCGTGTCTTGAT
ATCAATGAATGCCACATGAATCCTTGTGAAAATGGTCGATGTGAAAACTCTGAAGGTTCC
TTCCAATGTCATTGCCACCGATTCCAGATTCTCGATTCAACTGGAACACGATGTTTACTT
GATGTTGACGAATGCTCAAAGAACCTTTGTAGCAACGGAGCTTGTAGGAACACCCCAGGA
TCTTACACATGTACCTGCAATGAGGGATACCTCCTTCGTGGGGATGTGTGTGAAGATATT
GATGAATGCTCCATCCCCGGCCACTGCACTGGAGGTACTTGCTTCAACACTGAGGGAAGT
TATGAATGTGTTTGTCCAGATGGAAGATCATTGGGACCAGATGGAACCAAATGTATTGAT
GTTGATGAATGTGCATTGAGACCCAATCTATGTGAACCTAACGGTAGATGTGAGAACATG
TTAGGATACTACATGTGTATATGTGATGTTGGCTACATTCCTACACCCGATGCCAGGGAT
TGTGTCAATCGTGATGAATGTATGGAACAAATGAACAGATGTGACGGCGGTACTTGTGAA
AATACCGATGGTGCTTTTAGATGCGTCTGCTTTGATGGATTTATGGCAACTGCTGATTTA
CAGTTCTGTGAAGATATCGATGAATGTGCAATGAATGCAAACGTGTGTATGCACGGCAAA
TGTCACAACACCAGAGGATCATACACATGTAACTGCGAACCTGGATATTGCGTTCCACAA
GGACAAATGATCTGTGTTGACAATGACGATTGTGTTGAGGATGATACGTTATGTGGACCT
CATGGGCAGTGCATGAACATCGAGGGAAGTTTTGAATGTAATTGTCCCATGGGATTCGTT
ACAACAGAAGATAGGAAGGCTTGCAAGGATGTTGATGAATGCTCAGATCTTGCCAACTGT
ATCAATGGTATGTGCGTCAACACCGACGGCGCATATGAGTGTCAATGTCCAGAAGGTTTC
CAGAGTAACCCTACAGGCATTGGTTGTGTTGACAAGAATGAATGTGATGAAGAAGGCCAA
TGTAACAATGGTTTCTGTGACAACACACCTGGTGGATTTGCATGCGATTGTAATGAAGGA
TATTCAGTAACACCTGACGGCAGAGTTTGTATTGATACTGATGAATGTACAGAAGATCCA
TTAGTGTGTGGTATTGGTACTTGCCAGAACATGGATGGTTCTTTCAAATGTTATTGCCCT
GATGGTTACAACAGTGATAATGGTGCAGCTTGTAATGATGTTGATGAATGTGGCGGGCAA
CAAAGCTCGTGCGCTGGAAGTTGCCAGAACATCCCAGGTTCCTTCAGATGTCTTTGTTCC
CGAGGTTTCCGACCCACTATGTACGGTAGAGGTTGCCAAGATGTGAACGAATGCGCTCAC
AGCCCGTGCTCGCAAGGACAAAGCTGTTCCAACAGGGTTGGATCGTTCCAATGTGGATGT
CCATCAGGATTGGCGAAGATGCGCGGAGGATGCGGTGACGTTGATGAGTGCCAGATGGGA
GGAGGAAGCTGCAACTTTGGATGCCGAAATAGTTACGGAGGATTCTCTTGCAGCTGCAGA
GGTGGTTTCTTCCGCATGGGCAGTGGACATTGCATGAGCGGCCACTTTGAACAAAGAGTT
CCAAGATTCCCACAATTCCCTCAGTTTGGTGGCTACGGTGGTCCACAGATGGGCATGCCT
CCAAATGGTGGATTCCAGGGTGCTATGAGGCCCAAGGATAGCGTGTGCTATGCGTGCATG
CCAGGTGGTGACACACGACGTAGACATAAGAGGTCTGCTGATGGTGGAAGATTTATCGAA
GTTTCGAACCGTCATGGCAGAGGAACTGTCAACACCAGCTACCCCCTTGAGGTTCACCTG
AATCGCGCCACACTCACACGCCGCACACCCATCTTGGAGCTGCAACCTTCCCTGAAACAA
CTTCGCAACAACGTCCGTTACCGCATCGTGTCCGGAAACGACGATCGCAAATTCCGTCTC
AACCCACGAGGAAGCTCCAGCGTCCTCCACTTCACCGAGGAAGGTCTTCAACAAGATCTC
GCCGGAGTCGCAAGTGAGCTCACCATCCGAGGATCAACAACCTTAAGCAAGGATGAAGTG
AAGCAAGTTGCTCTCGACAGCGATCTTCTTGAGAAAGCTATTGAAGATATCCTGGAGTTC
CACGTCCAGATCCATGTCAACCAGCCTTAGATTTCTCTTCACCACTGGACAGATTATTTA
ATAGGACTGGCGGCTTGTAGAAAAACTGCATCCGCCTTAAATTTGGTTTTGTGTTTGACT
ATAAGCGATTACGTCATTTTAGTGTCATTACTACGTATTTTGACACGTCATCACTATTTA
GCGCCGCACATAACGTATAACCCTCCATGAAAATTTTTCAAGCGAAAAAAAACACCTTTC
ACACTAACGTCTGCCTGTAACTACCGAAACTTTTCAGTGGTCTATAAATGCAGCATATTT
CTTATTGTTTTATAGGCTAATTGTATCGCTTTGTGCCTTAATTGTACATAGGTATAACCG
TTGCAGCCGTTTTCTATGCTACACAGT
| PANTHER |
FBN (IPR011398) - T[2-343] 5.8E-242 - T[362-479] 5.8E-242 - T[480-593] 5.8E-242 - T[577-691] 5.8E-242 - T[685-895] 5.8E-242 - T[892-1118] 5.8E-242 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[30-63] 8.763 - T[99-131] 12.647 - T[195-236] 11.187 - T[237-277] 9.984 - T[353-397] 7.233 - T[398-439] 10.092 - T[440-479] 13.135 - T[481-518] 14.483 - T[519-559] 11.134 - T[560-602] 12.803 - T[603-644] 9.459 - T[645-682] 9.953 - T[687-729] 10.814 - T[730-770] 9.731 - T[771-811] 8.906 - T[812-849] 8.459 - T[853-893] 8.698 - T[894-930] 10.883 |
| SMART |
EGF-like_dom (IPR000742) - T[33-63] 27.0 - T[71-99] 1.9 - T[102-131] 0.0088 - T[198-236] 6.6E-4 - T[240-277] 1.1E-4 - T[356-397] 0.027 - T[401-439] 2.4E-4 - T[443-479] 0.084 - T[484-518] 2.9E-6 - T[522-559] 0.011 - T[563-602] 0.085 - T[606-644] 0.017 - T[648-686] 0.0019 - T[690-729] 0.004 - T[733-770] 0.0018 - T[774-811] 0.2 - T[815-852] 0.087 - T[856-893] 4.5 - T[897-932] 0.11 - T[936-972] 43.0 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[119-130] . - T[119-130] . - T[220-235] . - T[381-396] . - T[423-438] . - T[504-517] . - T[586-601] . - T[628-643] . - T[713-728] . - T[754-769] . - T[795-810] . - T[877-892] . |
| SUPERFAMILY |
TB_dom_sf (IPR036773) - T[132-213] 3.73E-13 - T[274-344] 2.35E-7 |
| ProSiteProfiles |
TB_dom (IPR017878) - T[137-180] 13.151 - T[282-342] 13.771 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[195-235] 3.4E-9 - T[237-276] 2.7E-6 - T[398-438] 4.9E-7 - T[440-468] 1.7E-4 - T[481-511] 3.6E-6 - T[519-558] 1.7E-8 - T[560-601] 1.9E-8 - T[605-639] 2.6E-6 - T[645-678] 3.5E-8 - T[687-728] 4.2E-6 - T[730-769] 3.2E-8 - T[771-810] 2.5E-4 - T[812-851] 8.0E-7 - T[853-889] 4.1E-8 - T[894-925] 3.1E-7 - T[933-967] 6.8E-5 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[195-236] 2.6E-10 - T[237-277] 1.4E-8 - T[339-397] 0.23 - T[398-439] 6.0E-10 - T[440-479] 1.2E-7 - T[481-518] 1.7E-11 - T[519-559] 6.4E-8 - T[560-602] 3.2E-9 - T[603-644] 6.3E-7 - T[645-686] 5.3E-10 - T[687-729] 1.4E-7 - T[730-770] 2.2E-9 - T[771-811] 6.7E-6 - T[812-852] 9.6E-7 - T[853-893] 4.9E-9 - T[894-932] 8.2E-9 - T[933-972] 1.7E-5 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[211-222] . - T[252-263] . - T[414-425] . - T[454-465] . - T[495-506] . - T[534-545] . - T[577-588] . - T[619-630] . - T[661-672] . - T[704-715] . - T[745-756] . - T[786-797] . - T[828-839] . - T[868-879] . - T[909-920] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[237-261] . - T[398-423] . - T[560-586] . - T[687-713] . - T[894-918] . - T[933-957] . |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[356-485] 5.96E-13 - T[485-603] 1.88E-14 - T[561-694] 2.82E-13 - T[679-776] 1.49E-10 - T[775-894] 2.82E-13 - T[862-972] 1.04E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBN3_HUMAN | 34.166 % | 446 | 5.68E-132 |
| FBN1_HUMAN | 37.203 % | 540 | 7.14E-164 |
| FBN2_HUMAN | 35.669 % | 520 | 4.36E-157 |