- Transcript 'KH2012:KH.C3.225.v4....'
Transcript Model
Transcript Id
KH2012:KH.C3.225.v4.C.ND1-1
Possible name(s)
FBN1; FBN2; FBN3
Gene model
Location
KhC3 [6,392,411 / 6,425,024]
Amino acid sequence
Length: 1,097
>KH.C3.225.v4.C.ND1-1
SLTGRHVCHEKGSTFCCPGWTASTSGKTCSIPKCDEGNCGPRGVCVSPNRCMCQDGQTQM
RCQREDAEDRRCNMRCMNGGECVDNQCRCPYGYTGPHCGQHIDECEIMPGLCEGGTCRNT
DGSFACDCPEGYRADTNIHQCVDGLCENGACVNTRGSYVCNCNDGYRTSATQLECEDIDE
CVSNPCTNARCTNEPGAYRCVCEDGFILDTTGHVCYDIDECSIPGHCTGGTCFNTEGSYE
CVCPDGRSLGPDGTKCIDIDECLDNNGGCHMGCTDTIGSYECSCDDGFVLAFDGHTCADE
DECEMSKHNCHVNADCNNTEGGYNCRCIPGFHGDGFMCHDIDECSFEGICVNGRCHNVPG
TFRCVCLEGYEKDDQGANCTDVDECSDLANCINGMCVNTDGAYECQCPEGFQSNPTGIGC
VDINECVDEDLCFADSVCTNMPGSYVCSCMEGFVFDEISETCVDVNECDRDPCGRGVCQN
VFGSFTCTCDNGYRISDNGDCVEDPLVCGIGTCQNMDGSFKCYCPDGYNSDNGAACNDVN
ECDVGDKCVNGACINTPGGFECDCPDEHVVSSNKKTCIDLNECDENNPCVNGRCVNQPGS
FRCECTNGFTLDASGVVCVDVNECVSGASPCGNGTCTNTEGAFECACDDGFYNGPAMTCL
DVNECKPGLNNNCAFRCVNDIGSFHCACPDGYELREDGNTCKDTDECASPDLNDCTENGM
TCKNMIGFFVCHCQPGYRTSSTGTCVGICGPRGVCRNDPGGYHCECPRGYRRDDMGQACM
DVDECGGQQSSCAGSCQNIPGSFRCLCSRGFRPTMYGRGCQDVNECAHSPCSQGQSCSNR
VGSFQCGCPSGLAKMRGGCGDVDECQMGGGSCNFGCRNSYGGFSCSCRGGFFRMGSGHCM
SGHFEQRVPRFPQFPQFGGYGGPQMGMPPNGGFQGAMRPKDSVCYACMPGGDTRRRHKRS
ADGGRFIEVSNRHGRGTVNTSYPLEVHLNRATLTRRTPILELQPSLKQLRNNVRYRIVSG
NDDRKFRLNPRGSSSVLHFTEEGLQQDLAGVASELTIRGSTTLSKDEVKQVALDSDLLEK
AIEDILEFHVQIHVNQP
Nucleotide sequence
Length: 3,651
>KH2012:KH.C3.225.v4.C.ND1-1
AGTTTGACAGGCCGTCATGTTTGCCATGAAAAAGGTTCCACCTTCTGTTGCCCTGGTTGG
ACAGCTTCTACAAGCGGAAAGACTTGCTCAATACCCAAATGTGACGAAGGAAACTGTGGG
CCTCGTGGAGTTTGTGTCTCACCGAACAGATGTATGTGTCAGGACGGTCAAACACAAATG
AGGTGCCAGAGAGAAGACGCCGAAGACCGAAGATGTAACATGCGTTGTATGAACGGAGGG
GAGTGTGTGGACAACCAATGCAGATGTCCATACGGTTACACTGGACCACACTGTGGACAA
CACATTGATGAGTGCGAAATAATGCCGGGTCTTTGCGAGGGAGGAACTTGCAGAAATACT
GACGGATCTTTTGCCTGTGATTGCCCTGAAGGGTACAGAGCTGACACTAATATTCACCAG
TGCGTAGACGGCTTATGCGAGAACGGTGCATGTGTGAACACAAGGGGAAGCTACGTATGC
AACTGCAATGACGGCTACAGGACCTCTGCTACACAACTGGAGTGCGAAGATATTGATGAA
TGCGTGTCTAACCCTTGCACCAACGCCCGTTGTACCAACGAACCTGGTGCGTATAGATGT
GTTTGCGAGGATGGTTTTATATTGGACACCACTGGGCATGTCTGCTACGATATTGATGAA
TGCTCCATCCCCGGCCACTGCACTGGAGGTACTTGCTTCAACACTGAGGGAAGTTATGAA
TGTGTTTGTCCAGATGGAAGATCATTGGGACCAGATGGAACCAAATGTATTGACATTGAT
GAATGTTTGGATAACAATGGTGGTTGTCACATGGGATGCACCGATACCATTGGTTCTTAC
GAATGTAGTTGTGATGATGGGTTTGTGCTTGCTTTCGACGGACACACTTGTGCAGATGAG
GATGAATGCGAGATGTCGAAACACAATTGCCACGTGAATGCTGATTGTAACAACACAGAG
GGAGGATACAACTGCCGTTGTATTCCTGGTTTCCATGGAGATGGATTCATGTGCCACGAT
ATTGATGAATGCTCATTCGAGGGAATTTGCGTGAATGGCCGATGTCATAATGTGCCGGGA
ACTTTCCGATGTGTATGTCTTGAAGGGTATGAGAAAGACGACCAAGGCGCAAACTGTACA
GATGTTGATGAATGCTCAGATCTTGCCAACTGTATCAATGGTATGTGCGTCAACACCGAC
GGCGCATATGAGTGTCAATGTCCAGAAGGTTTCCAGAGTAACCCTACAGGCATTGGTTGT
GTTGACATCAATGAATGTGTTGACGAAGATCTTTGCTTTGCTGATTCTGTTTGTACCAAC
ATGCCAGGATCATATGTATGTTCTTGTATGGAAGGATTCGTGTTTGATGAAATAAGTGAA
ACTTGCGTTGATGTGAATGAATGCGACAGAGACCCGTGCGGACGCGGTGTTTGCCAGAAT
GTATTCGGAAGTTTCACTTGTACTTGTGACAATGGATATCGTATCTCTGATAATGGGGAT
TGTGTTGAAGATCCATTAGTGTGTGGTATTGGTACTTGCCAGAACATGGATGGTTCTTTC
AAATGTTATTGCCCTGATGGTTACAACAGTGATAATGGTGCAGCTTGTAATGATGTCAAT
GAATGCGATGTTGGCGACAAATGTGTGAATGGTGCTTGTATCAACACACCTGGTGGGTTT
GAATGTGACTGCCCAGATGAACACGTCGTCAGTTCTAACAAGAAGACTTGTATTGACCTC
AACGAATGTGATGAAAACAACCCATGCGTCAACGGCCGATGTGTCAACCAACCGGGTAGC
TTCCGTTGCGAATGCACCAACGGGTTCACACTCGATGCATCCGGTGTGGTGTGCGTTGAT
GTGAACGAGTGTGTCTCTGGAGCATCACCATGTGGTAACGGAACATGCACAAACACGGAG
GGAGCTTTCGAATGCGCGTGTGATGATGGATTCTATAACGGACCAGCCATGACTTGTTTG
GATGTCAACGAATGCAAACCTGGATTGAACAACAACTGTGCTTTCCGCTGCGTAAACGAC
ATCGGCAGCTTCCATTGTGCTTGCCCTGATGGTTACGAACTTCGTGAAGATGGAAACACT
TGCAAAGACACTGATGAATGCGCATCTCCTGACTTAAATGATTGCACTGAAAATGGAATG
ACTTGTAAGAATATGATTGGATTCTTTGTCTGTCACTGCCAACCAGGGTACAGGACTTCT
TCAACAGGAACTTGTGTTGGTATTTGTGGTCCACGTGGTGTTTGTAGGAATGATCCAGGT
GGTTACCATTGTGAGTGCCCTCGTGGGTACAGGAGAGATGACATGGGACAAGCTTGCATG
GATGTTGATGAATGTGGCGGGCAACAAAGCTCGTGCGCTGGAAGTTGCCAGAACATCCCA
GGTTCCTTCAGATGTCTTTGTTCCCGAGGTTTCCGACCCACTATGTACGGTAGAGGTTGC
CAAGATGTGAACGAATGCGCTCACAGCCCGTGCTCGCAAGGACAAAGCTGTTCCAACAGG
GTTGGATCGTTCCAATGTGGATGTCCATCAGGATTGGCGAAGATGCGCGGAGGATGCGGT
GACGTTGATGAGTGCCAGATGGGAGGAGGAAGCTGCAACTTTGGATGCCGAAATAGTTAC
GGAGGATTCTCTTGCAGCTGCAGAGGTGGTTTCTTCCGCATGGGCAGTGGACATTGCATG
AGCGGCCACTTTGAACAAAGAGTTCCAAGATTCCCACAATTCCCTCAGTTTGGTGGCTAC
GGTGGTCCACAGATGGGCATGCCTCCAAATGGTGGATTCCAGGGTGCTATGAGGCCCAAG
GATAGCGTGTGCTATGCGTGCATGCCAGGTGGTGACACACGACGTAGACATAAGAGGTCT
GCTGATGGTGGAAGATTTATCGAAGTTTCGAACCGTCATGGCAGAGGAACTGTCAACACC
AGCTACCCCCTTGAGGTTCACCTGAATCGCGCCACACTCACACGCCGCACACCCATCTTG
GAGCTGCAACCTTCCCTGAAACAACTTCGCAACAACGTCCGTTACCGCATCGTGTCCGGA
AACGACGATCGCAAATTCCGTCTCAACCCACGAGGAAGCTCCAGCGTCCTCCACTTCACC
GAGGAAGGTCTTCAACAAGATCTCGCCGGAGTCGCAAGTGAGCTCACCATCCGAGGATCA
ACAACCTTAAGCAAGGATGAAGTGAAGCAAGTTGCTCTCGACAGCGATCTTCTTGAGAAA
GCTATTGAAGATATCCTGGAGTTCCACGTCCAGATCCATGTCAACCAGCCTTAGATTTCT
CTTCACCACTGGACAGATTATTTAATAGGACTGGCGGCTTGTAGAAAAACTGCATCCGCC
TTAAATTTGGTTTTGTGTTTGACTATAAGCGATTACGTCATTTTAGTGTCATTACTACGT
ATTTTGACACGTCATCACTATTTAGCGCCGCACATAACGTATAACCCTCCATGAAAATTT
TTCAAGCGAAAAAAAACACCTTTCACACTAACGTCTGCCTGTAACTACCGAAACTTTTCA
GTGGTCTATAAATGCAGCATATTTCTTATTGTTTTATAGGCTAATTGTATCGCTTTGTGC
CTTAATTGTACATAGGTATAACCGTTGCAGCCGTTTTCTATGCTACACAGT
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[30-63] 8.763 - T[68-99] 11.28 - T[101-142] 10.226 - T[177-212] 11.237 - T[217-257] 11.134 - T[258-298] 7.616 - T[299-337] 14.218 - T[340-380] 11.904 - T[381-421] 9.731 - T[422-463] 12.098 - T[464-502] 9.604 - T[538-578] 8.734 - T[579-615] 13.659 - T[620-660] 10.644 - T[661-702] 7.91 - T[703-740] 8.455 - T[741-776] 9.655 - T[781-821] 8.698 - T[822-858] 10.883 |
| SMART |
EGF-like_dom (IPR000742) - T[33-63] 27.0 - T[71-99] 1.9 - T[104-138] 1.2 - T[140-176] 0.01 - T[180-216] 8.2E-4 - T[220-257] 0.011 - T[261-298] 0.024 - T[302-339] 0.027 - T[343-380] 0.0012 - T[384-421] 0.0018 - T[425-463] 0.011 - T[467-502] 5.6E-4 - T[507-537] 81.0 - T[541-578] 0.03 - T[582-619] 4.3E-6 - T[623-660] 0.0017 - T[664-702] 1.1E-4 - T[706-743] 7.0 - T[744-780] 0.38 - T[784-821] 4.5 - T[825-860] 0.11 - T[864-900] 43.0 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[53-183] 1.18E-11 - T[179-310] 5.76E-18 - T[350-469] 2.67E-15 - T[468-586] 3.45E-15 - T[583-708] 1.55E-17 - T[713-822] 1.44E-10 - T[789-900] 5.18E-9 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[87-98] . - T[87-98] . - T[126-141] . - T[282-297] . - T[364-379] . - T[405-420] . - T[447-462] . - T[487-501] . - T[645-659] . - T[686-701] . - T[805-820] . |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[101-142] 1.6E-8 - T[145-176] 0.0024 - T[177-216] 5.0E-9 - T[217-257] 6.4E-8 - T[258-298] 2.5E-7 - T[299-339] 1.6E-5 - T[340-380] 1.4E-11 - T[381-421] 2.2E-9 - T[422-463] 2.9E-9 - T[464-502] 1.6E-8 - T[507-537] 0.031 - T[538-578] 7.1E-8 - T[579-619] 6.7E-11 - T[620-660] 4.6E-11 - T[661-702] 2.1E-10 - T[703-746] 7.8E-8 - T[748-780] 0.0052 - T[781-821] 4.9E-9 - T[822-860] 8.2E-9 - T[861-900] 1.7E-5 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[102-141] 3.7E-8 - T[142-175] 3.9E-4 - T[177-215] 3.2E-6 - T[217-256] 1.6E-8 - T[340-379] 3.6E-7 - T[381-420] 3.0E-8 - T[422-462] 1.9E-7 - T[464-499] 3.8E-5 - T[501-536] 3.6E-4 - T[538-577] 2.3E-5 - T[579-618] 9.2E-6 - T[620-658] 7.5E-8 - T[661-701] 2.9E-8 - T[703-744] 2.5E-7 - T[748-779] 6.2E-4 - T[781-817] 3.8E-8 - T[822-853] 2.9E-7 - T[861-895] 6.3E-5 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[117-128] . - T[191-202] . - T[232-243] . - T[273-284] . - T[316-327] . - T[355-366] . - T[396-407] . - T[438-449] . - T[478-489] . - T[553-564] . - T[594-605] . - T[636-647] . - T[677-688] . - T[755-766] . - T[796-807] . - T[837-848] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[177-200] . - T[299-325] . - T[422-447] . - T[703-731] . - T[822-846] . - T[861-885] . |
| Pfam |
EGF_dom (IPR024731) - T[303-338] 8.1E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBN3_HUMAN | 34.876 % | 412 | 2.35E-121 |
| FBN1_HUMAN | 33.065 % | 472 | 1.07E-141 |
| FBN2_HUMAN | 33.095 % | 468 | 2.23E-140 |