- EST 'AHC0AAA224YB20_RM1' >
- Transcript 'KH2012:KH.C3.225.v12...' >
- Transcript 'KH2012:KH.C3.225.v6....'
Transcript Model
Transcript Id
KH2012:KH.C3.225.v6.C.ND1-1
Possible name(s)
FBN1; FBN2; FBN3
Gene model
Location
KhC3 [6,392,411 / 6,425,024]
Amino acid sequence
Length: 1,814
>KH.C3.225.v6.C.ND1-1
SLTGRHVCHEKGSTFCCPGWTASTSGKTCSIPKCDEGNCGPRGVCVSPNRCMCQDGQTQM
RCQREDAEDRRCNMRCMNGGECVDNQCRCPYGYTGPHCGQPICGPGCLNGGRCIAPGRCA
CVYGFTGMRCERDYRKGPCFHTRVNGTCKDEVPGVMCTKLFCCATVGEGWGHPCEECPAR
VGNCTKGRLPPLCTDIDECEIMPGLCEGGTCRNTDGSFACDCPEGYRADTNIHQCVDVNE
CASSDVCVYGNCINTDGGFICECPPDYKLSIDKTYCISDKPGRCYTAIESGMCARPLSEL
VRRTMCCCTPTGEETLGKCFAAVGEFPERCPAVGTPEFNRDCEGVTTGEVIPGGGLCELM
GDRACAHGRCVNQPEQHTYFCECEAGYESADGGKQCVDVDECTQAGSAYPSVCGPHGTCL
NTEGSYTCHCSRGFENDAGSMISCVDIDECTQDGLCENGACVNTRGSYVCNCNDGYRTSA
TQLECEDINECQEQQGLCDNGRCINSGGDFRCICNPGFFTSPDSRSCLDENECERDNMCA
NGECVNMDGRYKCVCNTGFHLLPSGQSCADINECHMNPCENGRCENSEGSFQCHCHRFQI
LDSTGTRCLLDQTSGECYRGVRNGQCRARNALTGGSSRSDCCCAVPGATSAWGDTCEPCP
EVGEADYTVLCHDVQISNICELMVNPCENGDCLKMGNNQFRCICNKGFVVADDQMSCIDV
DECSKNLCSNGACRNTPGSYTCTCNEGYLLRGDVCEDIDECVSNPCTNARCTNEPGAYRC
VCEDGFILDTTGHVCYDVKVGRCWSSYANNQCSGNIGNRLLTKEECCNTIGVAWGNANCR
PCTDFDLPCDHGYTLNVQTNECVNINECDFGLCQEDTTCVDLEGSFRCECPAGLTLRADG
TSCTDVRVGICYMEVEDGVCSTTSADTILMTKHQCCCTVGHGWGSPCEICPQAGTDARTK
LCLPANQRVITLNECILFPNLCVDGECLNTDSSFTCNCNQGYTLDESGKNCTDIDECGIS
PGLCGNGQCVNVGGDFRCDCDEGYEDSQTLKVCTDIDECSIPGHCTGGTCFNTEGSYECV
CPDGRSLGPDGTKCIDVDECALRPNLCEPNGRCENMLGYYMCICDVGYIPTPDARDCVNI
DECLDNNGGCHMGCTDTIGSYECSCDDGFVLAFDGHTCADNTTSNQVDAIKQNILIQLFF
TSDRDECMEQMNRCDGGTCENTDGAFRCVCFDGFMATADLQFCEDIDECAMNANVCMHGK
CHNTRGSYTCNCEPGYCVPQGQMICVDEDECEMSKHNCHVNADCNNTEGGYNCRCIPGFH
GDGFMCHGANCTDVDECSDLANCINGMCVNTDGAYECQCPEGFQSNPTGIGCVDLNECDE
NNPCVNGRCVNQPGSFRCECTNGFTLDASGVVCVDVNECKPGLNNNCAFRCVNDIGSFHC
ACPDGYELREDGNTCKDINECLAPTNPCSFDCRNTEGSYECICPKGYQIDADNSACVDVD
ECGGQQSSCAGSCQNIPGSFRCLCSRGFRPTMYGRGCQDVNECAHSPCSQGQSCSNRVGS
FQCGCPSGLAKMRGGCGDVDECQMGGGSCNFGCRNSYGGFSCSCRGGFFRMGSGHCMSGH
FEQRVPRFPQFPQFGGYGGPQMGMPPNGGFQGAMRPKDSVCYACMPGGDTRRRHKRSADG
GRFIEVSNRHGRGTVNTSYPLEVHLNRATLTRRTPILELQPSLKQLRNNVRYRIVSGNDD
RKFRLNPRGSSSVLHFTEEGLQQDLAGVASELTIRGSTTLSKDEVKQVALDSDLLEKAIE
DILEFHVQIHVNQP
Nucleotide sequence
Length: 5,802
>KH2012:KH.C3.225.v6.C.ND1-1
AGTTTGACAGGCCGTCATGTTTGCCATGAAAAAGGTTCCACCTTCTGTTGCCCTGGTTGG
ACAGCTTCTACAAGCGGAAAGACTTGCTCAATACCCAAATGTGACGAAGGAAACTGTGGG
CCTCGTGGAGTTTGTGTCTCACCGAACAGATGTATGTGTCAGGACGGTCAAACACAAATG
AGGTGCCAGAGAGAAGACGCCGAAGACCGAAGATGTAACATGCGTTGTATGAACGGAGGG
GAGTGTGTGGACAACCAATGCAGATGTCCATACGGTTACACTGGACCACACTGTGGACAA
CCCATTTGTGGACCTGGTTGTCTCAACGGAGGAAGATGTATTGCTCCAGGAAGATGTGCT
TGTGTATATGGATTCACCGGGATGCGGTGCGAGAGAGATTACCGAAAGGGCCCATGTTTC
CACACACGAGTTAACGGGACCTGCAAAGACGAAGTTCCAGGGGTTATGTGTACCAAGCTC
TTCTGTTGTGCTACTGTGGGAGAAGGATGGGGCCATCCGTGCGAGGAATGTCCCGCCCGA
GTCGGAAATTGTACCAAGGGTAGACTACCCCCTCTGTGCACAGACATTGATGAGTGCGAA
ATAATGCCGGGTCTTTGCGAGGGAGGAACTTGCAGAAATACTGACGGATCTTTTGCCTGT
GATTGCCCTGAAGGGTACAGAGCTGACACTAATATTCACCAGTGCGTAGATGTGAACGAA
TGCGCAAGCTCCGATGTCTGCGTCTACGGCAACTGTATCAACACGGATGGAGGCTTTATA
TGCGAATGCCCGCCAGATTACAAACTCTCAATTGACAAGACATACTGCATATCTGATAAA
CCCGGACGATGTTACACCGCCATTGAAAGTGGTATGTGCGCAAGACCCTTGTCTGAGTTG
GTACGACGGACTATGTGTTGTTGCACCCCTACTGGGGAGGAAACACTTGGAAAATGTTTT
GCCGCGGTTGGGGAGTTCCCCGAACGATGCCCTGCTGTTGGGACACCGGAGTTCAACAGA
GATTGCGAAGGTGTAACAACCGGCGAAGTTATACCTGGCGGTGGACTTTGTGAGCTTATG
GGTGATCGCGCATGCGCACACGGTCGATGCGTCAACCAACCAGAACAACATACTTACTTC
TGTGAGTGCGAGGCCGGCTACGAATCAGCGGACGGTGGAAAGCAATGTGTTGACGTGGAC
GAATGCACACAAGCCGGCTCTGCTTATCCAAGTGTATGCGGACCACACGGTACTTGCTTG
AACACTGAAGGATCGTACACTTGCCACTGCTCCAGAGGTTTCGAGAACGACGCTGGTAGC
ATGATCTCGTGCGTAGATATTGATGAATGTACCCAAGACGGCTTATGCGAGAACGGTGCA
TGTGTGAACACAAGGGGAAGCTACGTATGCAACTGCAATGACGGCTACAGGACCTCTGCT
ACACAACTGGAGTGCGAAGACATCAACGAATGCCAAGAACAACAAGGACTATGCGATAAC
GGACGTTGTATAAATAGCGGCGGAGACTTCAGGTGCATCTGCAACCCCGGGTTCTTTACC
TCTCCTGACTCAAGATCGTGTCTTGATGAAAATGAATGTGAAAGAGACAACATGTGCGCA
AACGGGGAGTGCGTCAACATGGATGGAAGATACAAGTGTGTCTGTAACACTGGCTTCCAT
TTGTTGCCAAGTGGACAAAGTTGTGCAGATATCAATGAATGCCACATGAATCCTTGTGAA
AATGGTCGATGTGAAAACTCTGAAGGTTCCTTCCAATGTCATTGCCACCGATTCCAGATT
CTCGATTCAACTGGAACACGATGTTTACTTGACCAAACATCTGGTGAATGTTACCGCGGT
GTTCGTAATGGGCAATGCCGAGCAAGGAACGCTCTCACTGGAGGGAGCTCAAGATCGGAT
TGTTGTTGCGCTGTTCCTGGAGCGACAAGCGCGTGGGGTGACACGTGTGAGCCATGCCCA
GAAGTTGGAGAAGCTGATTACACCGTTCTATGCCATGATGTGCAGATCAGTAACATCTGT
GAGCTGATGGTAAACCCTTGTGAGAACGGTGATTGCCTTAAGATGGGAAACAACCAGTTT
AGATGTATTTGCAACAAAGGATTTGTTGTTGCTGATGATCAGATGTCTTGCATTGATGTT
GACGAATGCTCAAAGAACCTTTGTAGCAACGGAGCTTGTAGGAACACCCCAGGATCTTAC
ACATGTACCTGCAATGAGGGATACCTCCTTCGTGGGGATGTGTGTGAAGATATTGATGAA
TGCGTGTCTAACCCTTGCACCAACGCCCGTTGTACCAACGAACCTGGTGCGTATAGATGT
GTTTGCGAGGATGGTTTTATATTGGACACCACTGGGCATGTCTGCTACGACGTTAAGGTT
GGCCGATGCTGGAGTTCATATGCAAACAACCAGTGTTCGGGAAATATCGGAAACCGACTT
CTTACTAAGGAGGAATGTTGTAACACCATCGGTGTAGCATGGGGTAATGCTAACTGCAGA
CCATGCACTGATTTCGACCTTCCATGCGACCATGGATACACCCTCAATGTTCAAACTAAC
GAATGTGTCAACATTAATGAATGCGACTTCGGACTTTGCCAAGAGGATACCACGTGTGTG
GATCTGGAAGGTTCTTTCAGATGTGAATGCCCAGCTGGGCTCACACTGCGCGCAGATGGC
ACATCATGCACAGATGTGAGAGTTGGAATTTGTTACATGGAAGTTGAGGATGGTGTTTGC
TCCACCACATCCGCCGACACCATACTGATGACCAAACACCAGTGTTGTTGCACTGTGGGC
CATGGATGGGGTTCACCATGCGAGATTTGCCCACAGGCAGGAACAGACGCACGAACCAAG
CTATGTCTCCCGGCCAACCAACGTGTTATTACCCTCAACGAGTGCATTCTGTTCCCCAAC
CTTTGTGTGGATGGCGAATGTTTAAACACAGATTCCAGCTTTACCTGCAACTGTAATCAA
GGATACACCTTGGATGAATCTGGCAAAAACTGCACTGACATTGATGAATGTGGTATCAGC
CCCGGTCTTTGTGGTAACGGTCAATGCGTGAACGTTGGAGGTGACTTCAGATGCGATTGC
GACGAAGGATATGAAGATTCGCAAACCCTCAAAGTTTGCACAGATATTGATGAATGCTCC
ATCCCCGGCCACTGCACTGGAGGTACTTGCTTCAACACTGAGGGAAGTTATGAATGTGTT
TGTCCAGATGGAAGATCATTGGGACCAGATGGAACCAAATGTATTGATGTTGATGAATGT
GCATTGAGACCCAATCTATGTGAACCTAACGGTAGATGTGAGAACATGTTAGGATACTAC
ATGTGTATATGTGATGTTGGCTACATTCCTACACCCGATGCCAGGGATTGTGTCAACATT
GATGAATGTTTGGATAACAATGGTGGTTGTCACATGGGATGCACCGATACCATTGGTTCT
TACGAATGTAGTTGTGATGATGGGTTTGTGCTTGCTTTCGACGGACACACTTGTGCAGAT
AATACAACCTCAAACCAGGTTGATGCCATAAAACAAAACATACTCATTCAATTATTTTTC
ACATCAGATCGTGATGAATGTATGGAACAAATGAACAGATGTGACGGCGGTACTTGTGAA
AATACCGATGGTGCTTTTAGATGCGTCTGCTTTGATGGATTTATGGCAACTGCTGATTTA
CAGTTCTGTGAAGATATCGATGAATGTGCAATGAATGCAAACGTGTGTATGCACGGCAAA
TGTCACAACACCAGAGGATCATACACATGTAACTGCGAACCTGGATATTGCGTTCCACAA
GGACAAATGATCTGTGTTGATGAGGATGAATGCGAGATGTCGAAACACAATTGCCACGTG
AATGCTGATTGTAACAACACAGAGGGAGGATACAACTGCCGTTGTATTCCTGGTTTCCAT
GGAGATGGATTCATGTGCCACGGCGCAAACTGTACAGATGTTGATGAATGCTCAGATCTT
GCCAACTGTATCAATGGTATGTGCGTCAACACCGACGGCGCATATGAGTGTCAATGTCCA
GAAGGTTTCCAGAGTAACCCTACAGGCATTGGTTGTGTTGACCTCAACGAATGTGATGAA
AACAACCCATGCGTCAACGGCCGATGTGTCAACCAACCGGGTAGCTTCCGTTGCGAATGC
ACCAACGGGTTCACACTCGATGCATCCGGTGTGGTGTGCGTTGATGTCAACGAATGCAAA
CCTGGATTGAACAACAACTGTGCTTTCCGCTGCGTAAACGACATCGGCAGCTTCCATTGT
GCTTGCCCTGATGGTTACGAACTTCGTGAAGATGGAAACACTTGCAAAGATATCAACGAA
TGTCTTGCACCAACCAACCCATGCAGCTTTGATTGCCGAAACACAGAGGGAAGTTACGAA
TGTATTTGCCCCAAGGGTTACCAGATCGATGCTGATAATAGTGCTTGTGTTGATGTTGAT
GAATGTGGCGGGCAACAAAGCTCGTGCGCTGGAAGTTGCCAGAACATCCCAGGTTCCTTC
AGATGTCTTTGTTCCCGAGGTTTCCGACCCACTATGTACGGTAGAGGTTGCCAAGATGTG
AACGAATGCGCTCACAGCCCGTGCTCGCAAGGACAAAGCTGTTCCAACAGGGTTGGATCG
TTCCAATGTGGATGTCCATCAGGATTGGCGAAGATGCGCGGAGGATGCGGTGACGTTGAT
GAGTGCCAGATGGGAGGAGGAAGCTGCAACTTTGGATGCCGAAATAGTTACGGAGGATTC
TCTTGCAGCTGCAGAGGTGGTTTCTTCCGCATGGGCAGTGGACATTGCATGAGCGGCCAC
TTTGAACAAAGAGTTCCAAGATTCCCACAATTCCCTCAGTTTGGTGGCTACGGTGGTCCA
CAGATGGGCATGCCTCCAAATGGTGGATTCCAGGGTGCTATGAGGCCCAAGGATAGCGTG
TGCTATGCGTGCATGCCAGGTGGTGACACACGACGTAGACATAAGAGGTCTGCTGATGGT
GGAAGATTTATCGAAGTTTCGAACCGTCATGGCAGAGGAACTGTCAACACCAGCTACCCC
CTTGAGGTTCACCTGAATCGCGCCACACTCACACGCCGCACACCCATCTTGGAGCTGCAA
CCTTCCCTGAAACAACTTCGCAACAACGTCCGTTACCGCATCGTGTCCGGAAACGACGAT
CGCAAATTCCGTCTCAACCCACGAGGAAGCTCCAGCGTCCTCCACTTCACCGAGGAAGGT
CTTCAACAAGATCTCGCCGGAGTCGCAAGTGAGCTCACCATCCGAGGATCAACAACCTTA
AGCAAGGATGAAGTGAAGCAAGTTGCTCTCGACAGCGATCTTCTTGAGAAAGCTATTGAA
GATATCCTGGAGTTCCACGTCCAGATCCATGTCAACCAGCCTTAGATTTCTCTTCACCAC
TGGACAGATTATTTAATAGGACTGGCGGCTTGTAGAAAAACTGCATCCGCCTTAAATTTG
GTTTTGTGTTTGACTATAAGCGATTACGTCATTTTAGTGTCATTACTACGTATTTTGACA
CGTCATCACTATTTAGCGCCGCACATAACGTATAACCCTCCATGAAAATTTTTCAAGCGA
AAAAAAACACCTTTCACACTAACGTCTGCCTGTAACTACCGAAACTTTTCAGTGGTCTAT
AAATGCAGCATATTTCTTATTGTTTTATAGGCTAATTGTATCGCTTTGTGCCTTAATTGT
ACATAGGTATAACCGTTGCAGCCGTTTTCTATGCTACACAGT
| PANTHER |
FBN (IPR011398) - T[2-1327] 0.0 - T[1328-1375] 0.0 - T[1372-1540] 0.0 - T[1472-1763] 0.0 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[30-63] 8.763 - T[99-131] 12.647 - T[195-236] 11.187 - T[237-277] 9.984 - T[353-397] 7.233 - T[398-440] 12.576 - T[446-486] 11.101 - T[487-528] 10.092 - T[529-569] 10.049 - T[570-609] 13.135 - T[676-714] 6.949 - T[719-756] 14.483 - T[757-792] 11.237 - T[864-904] 13.828 - T[971-1012] 9.609 - T[1013-1050] 11.187 - T[1055-1095] 11.134 - T[1096-1138] 12.803 - T[1139-1179] 7.537 - T[1203-1244] 9.537 - T[1245-1282] 9.953 - T[1287-1325] 14.218 - T[1333-1373] 9.731 - T[1374-1410] 13.659 - T[1415-1456] 7.91 - T[1457-1497] 7.965 - T[1498-1538] 8.698 - T[1539-1575] 10.883 |
| SMART |
EGF-like_dom (IPR000742) - T[33-63] 27.0 - T[71-99] 1.9 - T[102-131] 0.0088 - T[198-236] 6.6E-4 - T[240-277] 1.1E-4 - T[356-397] 0.027 - T[401-445] 0.008 - T[449-486] 4.7E-4 - T[490-528] 2.4E-4 - T[532-569] 5.4E-4 - T[573-609] 0.084 - T[679-718] 0.0026 - T[722-756] 2.9E-6 - T[760-796] 8.2E-4 - T[867-904] 5.2E-4 - T[974-1012] 0.0034 - T[1016-1054] 6.4E-4 - T[1058-1095] 0.011 - T[1099-1138] 0.085 - T[1142-1179] 0.024 - T[1206-1244] 0.017 - T[1248-1286] 0.0019 - T[1290-1327] 0.027 - T[1336-1373] 0.0018 - T[1377-1414] 4.3E-6 - T[1418-1456] 1.1E-4 - T[1460-1497] 0.0012 - T[1501-1538] 4.5 - T[1542-1577] 0.11 - T[1581-1617] 43.0 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[119-130] . - T[119-130] . - T[220-235] . - T[381-396] . - T[470-485] . - T[512-527] . - T[553-568] . - T[742-755] . - T[996-1011] . - T[1122-1137] . - T[1163-1178] . - T[1228-1243] . - T[1357-1372] . - T[1440-1455] . - T[1481-1496] . - T[1522-1537] . |
| Gene3D |
TB_dom_sf (IPR036773) - T[131-194] 3.4E-8 - T[278-350] 4.9E-8 - T[610-679] 1.0E-13 - T[800-863] 2.1E-12 - T[905-974] 7.1E-18 |
| SUPERFAMILY |
TB_dom_sf (IPR036773) - T[132-213] 1.29E-12 - T[274-344] 4.05E-7 - T[608-672] 5.23E-8 - T[792-853] 2.88E-8 - T[900-965] 3.4E-15 |
| ProSiteProfiles |
TB_dom (IPR017878) - T[137-180] 13.151 - T[282-342] 13.771 - T[615-671] 15.627 - T[801-842] 13.662 - T[909-962] 16.162 |
| Pfam |
TB_dom (IPR017878) - T[148-180] 2.7E-6 - T[292-343] 3.7E-9 - T[630-672] 2.3E-10 - T[811-842] 2.5E-5 - T[920-962] 7.7E-13 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[174-284] 1.52E-9 - T[356-487] 4.24E-13 - T[485-610] 2.67E-14 - T[671-804] 3.77E-14 - T[962-1097] 6.43E-18 - T[1062-1180] 7.85E-16 - T[1199-1327] 3.92E-13 - T[1314-1456] 1.88E-14 - T[1416-1539] 2.83E-16 - T[1507-1617] 1.1E-9 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[195-235] 5.6E-9 - T[237-276] 4.4E-6 - T[398-438] 7.3E-8 - T[446-485] 5.3E-7 - T[487-527] 8.0E-7 - T[719-749] 5.9E-6 - T[757-795] 5.5E-6 - T[1055-1094] 2.8E-8 - T[1096-1137] 3.2E-8 - T[1203-1239] 2.6E-6 - T[1245-1278] 5.7E-8 - T[1333-1372] 5.2E-8 - T[1374-1413] 1.6E-5 - T[1415-1455] 5.1E-8 - T[1457-1496] 1.8E-9 - T[1498-1534] 6.6E-8 - T[1539-1570] 5.1E-7 - T[1578-1612] 1.1E-4 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[195-236] 2.6E-10 - T[237-277] 1.4E-8 - T[339-397] 0.23 - T[398-445] 1.6E-11 - T[446-486] 8.4E-11 - T[487-528] 6.0E-10 - T[529-569] 7.4E-8 - T[570-609] 1.2E-7 - T[678-718] 0.89 - T[719-756] 1.7E-11 - T[757-796] 5.0E-9 - T[864-904] 3.3E-10 - T[971-1012] 3.4E-4 - T[1013-1054] 4.5E-10 - T[1055-1095] 6.4E-8 - T[1096-1138] 3.2E-9 - T[1139-1179] 1.5E-6 - T[1203-1244] 1.1E-7 - T[1245-1286] 5.3E-10 - T[1287-1332] 5.6E-5 - T[1333-1373] 2.2E-9 - T[1374-1414] 6.7E-11 - T[1415-1456] 2.1E-10 - T[1457-1497] 9.1E-10 - T[1498-1538] 4.9E-9 - T[1539-1577] 8.2E-9 - T[1578-1617] 1.7E-5 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[211-222] . - T[252-263] . - T[419-430] . - T[461-472] . - T[503-514] . - T[544-555] . - T[584-595] . - T[733-744] . - T[771-782] . - T[879-890] . - T[987-998] . - T[1029-1040] . - T[1070-1081] . - T[1113-1124] . - T[1154-1165] . - T[1219-1230] . - T[1261-1272] . - T[1304-1315] . - T[1348-1359] . - T[1389-1400] . - T[1431-1442] . - T[1472-1483] . - T[1513-1524] . - T[1554-1565] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[237-261] . - T[398-428] . - T[487-512] . - T[570-593] . - T[757-780] . - T[858-888] . - T[1055-1079] . - T[1096-1122] . - T[1287-1313] . - T[1539-1563] . - T[1578-1602] . |
| Pfam |
cEGF (IPR026823) - T[551-573] 7.7E-7 - T[885-906] 1.2E-6 - T[993-1016] 1.3E-8 |
| Pfam |
EGF_dom (IPR024731) - T[1291-1326] 1.4E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBN3_HUMAN | 38.748 % | 981 | 0 |
| FBN1_HUMAN | 41.209 % | 836 | 0 |
| FBN2_HUMAN | 40.829 % | 1103 | 0 |