- Transcript 'KH2012:KH.C3.225.v13...' >
- Transcript 'KH2012:KH.C3.225.v9....' >
- Transcript 'KH2012:KH.C3.225.v7....'
Transcript Model
Transcript Id
KH2012:KH.C3.225.v7.C.ND1-1
Possible name(s)
FBN1; FBN2; FBN3
Gene model
Location
KhC3 [6,392,411 / 6,425,024]
Amino acid sequence
Length: 1,072
>KH.C3.225.v7.C.ND1-1
SLTGRHVCHEKGSTFCCPGWTASTSGKTCSIPKCDEGNCGPRGVCVSPNRCMCQDGQTQM
RCQREDAEDRRCNMRCMNGGECVDNQCRCPYGYTGPHCGQPICGPGCLNGGRCIAPGRCA
CVYGFTGMRCERDYRKGPCFHTRVNGTCKDEVPGVMCTKLFCCATVGEGWGHPCEECPAR
VGNCTKGRLPPLCTDIDECEIMPGLCEGGTCRNTDGSFACDCPEGYRADTNIHQCVDVNE
CASSDVCVYGNCINTDGGFICECPPDYKLSIDKTYCISDKPGRCYTAIESGMCARPLSEL
VRRTMCCCTPTGEETLGKCFAAVGEFPERCPAVGTPEFNRDCEGVTTGEVIPGGGLCELM
GDRACAHGRCVNQPEQHTYFCECEAGYESADGGKQCVDVDECTQAGSAYPSVCGPHGTCL
NTEGSYTCHCSRGFENDAGSMISCVDIDECTQDGLCENGACVNTRGSYVCNCNDGYRTSA
TQLECEDIDECLDNNGGCHMGCTDTIGSYECSCDDGFVLAFDGHTCADEDECEMSKHNCH
VNADCNNTEGGYNCRCIPGFHGDGFMCHGANCTDVDECSDLANCINGMCVNTDGAYECQC
PEGFQSNPTGIGCVDLNECDENNPCVNGRCVNQPGSFRCECTNGFTLDASGVVCVDVNEC
KPGLNNNCAFRCVNDIGSFHCACPDGYELREDGNTCKDINECLAPTNPCSFDCRNTEGSY
ECICPKGYQIDADNSACVGICGPRGVCRNDPGGYHYVDECGGQQSSCAGSCQNIPGSFRC
LCSRGFRPTMYGRGCQDVNECAHSPCSQGQSCSNRVGSFQCGCPSGLAKMRGGCGDVDEC
QMGGGSCNFGCRNSYGGFSCSCRGGFFRMGSGHCMSGHFEQRVPRFPQFPQFGGYGGPQM
GMPPNGGFQGAMRPKDSVCYACMPGGDTRRRHKRSADGGRFIEVSNRHGRGTVNTSYPLE
VHLNRATLTRRTPILELQPSLKQLRNNVRYRIVSGNDDRKFRLNPRGSSSVLHFTEEGLQ
QDLAGVASELTIRGSTTLSKDEVKQVALDSDLLEKAIEDILEFHVQIHVNQP
Nucleotide sequence
Length: 3,576
>KH2012:KH.C3.225.v7.C.ND1-1
AGTTTGACAGGCCGTCATGTTTGCCATGAAAAAGGTTCCACCTTCTGTTGCCCTGGTTGG
ACAGCTTCTACAAGCGGAAAGACTTGCTCAATACCCAAATGTGACGAAGGAAACTGTGGG
CCTCGTGGAGTTTGTGTCTCACCGAACAGATGTATGTGTCAGGACGGTCAAACACAAATG
AGGTGCCAGAGAGAAGACGCCGAAGACCGAAGATGTAACATGCGTTGTATGAACGGAGGG
GAGTGTGTGGACAACCAATGCAGATGTCCATACGGTTACACTGGACCACACTGTGGACAA
CCCATTTGTGGACCTGGTTGTCTCAACGGAGGAAGATGTATTGCTCCAGGAAGATGTGCT
TGTGTATATGGATTCACCGGGATGCGGTGCGAGAGAGATTACCGAAAGGGCCCATGTTTC
CACACACGAGTTAACGGGACCTGCAAAGACGAAGTTCCAGGGGTTATGTGTACCAAGCTC
TTCTGTTGTGCTACTGTGGGAGAAGGATGGGGCCATCCGTGCGAGGAATGTCCCGCCCGA
GTCGGAAATTGTACCAAGGGTAGACTACCCCCTCTGTGCACAGACATTGATGAGTGCGAA
ATAATGCCGGGTCTTTGCGAGGGAGGAACTTGCAGAAATACTGACGGATCTTTTGCCTGT
GATTGCCCTGAAGGGTACAGAGCTGACACTAATATTCACCAGTGCGTAGATGTGAACGAA
TGCGCAAGCTCCGATGTCTGCGTCTACGGCAACTGTATCAACACGGATGGAGGCTTTATA
TGCGAATGCCCGCCAGATTACAAACTCTCAATTGACAAGACATACTGCATATCTGATAAA
CCCGGACGATGTTACACCGCCATTGAAAGTGGTATGTGCGCAAGACCCTTGTCTGAGTTG
GTACGACGGACTATGTGTTGTTGCACCCCTACTGGGGAGGAAACACTTGGAAAATGTTTT
GCCGCGGTTGGGGAGTTCCCCGAACGATGCCCTGCTGTTGGGACACCGGAGTTCAACAGA
GATTGCGAAGGTGTAACAACCGGCGAAGTTATACCTGGCGGTGGACTTTGTGAGCTTATG
GGTGATCGCGCATGCGCACACGGTCGATGCGTCAACCAACCAGAACAACATACTTACTTC
TGTGAGTGCGAGGCCGGCTACGAATCAGCGGACGGTGGAAAGCAATGTGTTGACGTGGAC
GAATGCACACAAGCCGGCTCTGCTTATCCAAGTGTATGCGGACCACACGGTACTTGCTTG
AACACTGAAGGATCGTACACTTGCCACTGCTCCAGAGGTTTCGAGAACGACGCTGGTAGC
ATGATCTCGTGCGTAGATATTGATGAATGTACCCAAGACGGCTTATGCGAGAACGGTGCA
TGTGTGAACACAAGGGGAAGCTACGTATGCAACTGCAATGACGGCTACAGGACCTCTGCT
ACACAACTGGAGTGCGAAGACATTGATGAATGTTTGGATAACAATGGTGGTTGTCACATG
GGATGCACCGATACCATTGGTTCTTACGAATGTAGTTGTGATGATGGGTTTGTGCTTGCT
TTCGACGGACACACTTGTGCAGATGAGGATGAATGCGAGATGTCGAAACACAATTGCCAC
GTGAATGCTGATTGTAACAACACAGAGGGAGGATACAACTGCCGTTGTATTCCTGGTTTC
CATGGAGATGGATTCATGTGCCACGGCGCAAACTGTACAGATGTTGATGAATGCTCAGAT
CTTGCCAACTGTATCAATGGTATGTGCGTCAACACCGACGGCGCATATGAGTGTCAATGT
CCAGAAGGTTTCCAGAGTAACCCTACAGGCATTGGTTGTGTTGACCTCAACGAATGTGAT
GAAAACAACCCATGCGTCAACGGCCGATGTGTCAACCAACCGGGTAGCTTCCGTTGCGAA
TGCACCAACGGGTTCACACTCGATGCATCCGGTGTGGTGTGCGTTGATGTCAACGAATGC
AAACCTGGATTGAACAACAACTGTGCTTTCCGCTGCGTAAACGACATCGGCAGCTTCCAT
TGTGCTTGCCCTGATGGTTACGAACTTCGTGAAGATGGAAACACTTGCAAAGATATCAAC
GAATGTCTTGCACCAACCAACCCATGCAGCTTTGATTGCCGAAACACAGAGGGAAGTTAC
GAATGTATTTGCCCCAAGGGTTACCAGATCGATGCTGATAATAGTGCTTGTGTTGGTATT
TGTGGTCCACGTGGTGTTTGTAGGAATGATCCAGGTGGTTACCATTATGTTGATGAATGT
GGCGGGCAACAAAGCTCGTGCGCTGGAAGTTGCCAGAACATCCCAGGTTCCTTCAGATGT
CTTTGTTCCCGAGGTTTCCGACCCACTATGTACGGTAGAGGTTGCCAAGATGTGAACGAA
TGCGCTCACAGCCCGTGCTCGCAAGGACAAAGCTGTTCCAACAGGGTTGGATCGTTCCAA
TGTGGATGTCCATCAGGATTGGCGAAGATGCGCGGAGGATGCGGTGACGTTGATGAGTGC
CAGATGGGAGGAGGAAGCTGCAACTTTGGATGCCGAAATAGTTACGGAGGATTCTCTTGC
AGCTGCAGAGGTGGTTTCTTCCGCATGGGCAGTGGACATTGCATGAGCGGCCACTTTGAA
CAAAGAGTTCCAAGATTCCCACAATTCCCTCAGTTTGGTGGCTACGGTGGTCCACAGATG
GGCATGCCTCCAAATGGTGGATTCCAGGGTGCTATGAGGCCCAAGGATAGCGTGTGCTAT
GCGTGCATGCCAGGTGGTGACACACGACGTAGACATAAGAGGTCTGCTGATGGTGGAAGA
TTTATCGAAGTTTCGAACCGTCATGGCAGAGGAACTGTCAACACCAGCTACCCCCTTGAG
GTTCACCTGAATCGCGCCACACTCACACGCCGCACACCCATCTTGGAGCTGCAACCTTCC
CTGAAACAACTTCGCAACAACGTCCGTTACCGCATCGTGTCCGGAAACGACGATCGCAAA
TTCCGTCTCAACCCACGAGGAAGCTCCAGCGTCCTCCACTTCACCGAGGAAGGTCTTCAA
CAAGATCTCGCCGGAGTCGCAAGTGAGCTCACCATCCGAGGATCAACAACCTTAAGCAAG
GATGAAGTGAAGCAAGTTGCTCTCGACAGCGATCTTCTTGAGAAAGCTATTGAAGATATC
CTGGAGTTCCACGTCCAGATCCATGTCAACCAGCCTTAGATTTCTCTTCACCACTGGACA
GATTATTTAATAGGACTGGCGGCTTGTAGAAAAACTGCATCCGCCTTAAATTTGGTTTTG
TGTTTGACTATAAGCGATTACGTCATTTTAGTGTCATTACTACGTATTTTGACACGTCAT
CACTATTTAGCGCCGCACATAACGTATAACCCTCCATGAAAATTTTTCAAGCGAAAAAAA
ACACCTTTCACACTAACGTCTGCCTGTAACTACCGAAACTTTTCAGTGGTCTATAAATGC
AGCATATTTCTTATTGTTTTATAGGCTAATTGTATCGCTTTGTGCCTTAATTGTACATAG
GTATAACCGTTGCAGCCGTTTTCTATGCTACACAGT
| PANTHER |
FBN (IPR011398) - T[2-235] 2.6E-206 - T[232-451] 2.6E-206 - T[364-533] 2.6E-206 - T[522-568] 2.6E-206 - T[569-616] 2.6E-206 - T[615-1024] 2.6E-206 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[30-63] 8.763 - T[99-131] 12.647 - T[195-236] 11.187 - T[237-277] 9.984 - T[353-397] 7.233 - T[398-440] 12.576 - T[446-486] 11.101 - T[487-527] 7.616 - T[528-566] 14.218 - T[574-614] 9.731 - T[615-651] 13.659 - T[656-697] 7.91 - T[698-738] 7.965 - T[756-796] 7.446 - T[797-833] 10.883 |
| SMART |
EGF-like_dom (IPR000742) - T[33-63] 27.0 - T[71-99] 1.9 - T[102-131] 0.0088 - T[198-236] 6.6E-4 - T[240-277] 1.1E-4 - T[356-397] 0.027 - T[401-445] 0.008 - T[449-486] 4.7E-4 - T[490-527] 0.024 - T[531-568] 0.027 - T[577-614] 0.0018 - T[618-655] 4.3E-6 - T[659-697] 1.1E-4 - T[701-738] 0.0012 - T[759-796] 4.5 - T[800-835] 0.11 - T[839-875] 43.0 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[119-130] . - T[119-130] . - T[220-235] . - T[381-396] . - T[470-485] . - T[511-526] . - T[598-613] . - T[681-696] . - T[722-737] . - T[780-795] . |
| SUPERFAMILY |
TB_dom_sf (IPR036773) - T[132-213] 6.67E-13 - T[274-344] 3.14E-7 |
| ProSiteProfiles |
TB_dom (IPR017878) - T[137-180] 13.151 - T[282-342] 13.771 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[172-284] 1.33E-9 - T[356-491] 2.2E-13 - T[485-622] 2.04E-16 - T[619-739] 3.45E-16 - T[747-875] 7.85E-10 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[195-235] 3.1E-9 - T[237-276] 2.4E-6 - T[398-438] 4.0E-8 - T[446-485] 2.9E-7 - T[574-613] 2.9E-8 - T[615-654] 9.0E-6 - T[656-696] 2.8E-8 - T[698-737] 9.8E-10 - T[757-792] 6.6E-7 - T[797-828] 2.8E-7 - T[836-870] 6.2E-5 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[195-236] 2.6E-10 - T[237-277] 1.4E-8 - T[339-397] 0.23 - T[398-445] 1.6E-11 - T[446-486] 8.4E-11 - T[487-527] 2.5E-7 - T[528-573] 5.6E-5 - T[574-614] 2.2E-9 - T[615-655] 6.7E-11 - T[656-697] 2.1E-10 - T[698-738] 9.1E-10 - T[757-796] 5.5E-5 - T[797-835] 8.2E-9 - T[836-875] 1.7E-5 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[211-222] . - T[252-263] . - T[419-430] . - T[461-472] . - T[502-513] . - T[545-556] . - T[589-600] . - T[630-641] . - T[672-683] . - T[713-724] . - T[771-782] . - T[812-823] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[237-261] . - T[398-428] . - T[528-554] . - T[698-722] . - T[797-821] . - T[836-860] . |
| Pfam |
EGF_dom (IPR024731) - T[532-567] 7.9E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBN3_HUMAN | 34.758 % | 389 | 1.35E-113 |
| FBN1_HUMAN | 31.781 % | 392 | 9.83E-115 |
| FBN2_HUMAN | 37.002 % | 457 | 7.69E-137 |