- Transcript 'KH2012:KH.C3.225.v8....'
Transcript Model
Transcript Id
KH2012:KH.C3.225.v8.C.SL2-1
Possible name(s)
FBN1; FBN2; FBN3
Gene model
Location
KhC3 [6,392,411 / 6,422,098]
Amino acid sequence
Length: 922
>KH.C3.225.v8.C.SL2-1
YRKGPCFHTRVNGTCKDEVPGVMCTKLFCCATVGEGWGHPCEECPARVGNCTKGRLPPLC
TDIDECEIMPGLCEGGTCRNTDGSFACDCPEGYRADTNIHQCVDVNECASSDVCVYGNCI
NTDGGFICECPPDYKLSIDKTYCISDKPGRCYTAIESGMCARPLSELVRRTMCCCTPTGE
ETLGKCFAAVGEFPERCPAVGTPEFNRDCEGVTTGEVIPGGGLCELMGDRACAHGRCVNQ
PEQHTYFCECEAGYESADGGKQCVDVDECTQAGSAYPSVCGPHGTCLNTEGSYTCHCSRG
FENDAGSMISCVDIDECTQDGLCENGACVNTRGSYVCNCNDGYRTSATQLECEDIDECLD
NNGGCHMGCTDTIGSYECSCDDGFVLAFDGHTCADEDECEMSKHNCHVNADCNNTEGGYN
CRCIPGFHGDGFMCHGANCTDVDECSDLANCINGMCVNTDGAYECQCPEGFQSNPTGIGC
VDLNECDENNPCVNGRCVNQPGSFRCECTNGFTLDASGVVCVDVNECKPGLNNNCAFRCV
NDIGSFHCACPDGYELREDGNTCKDINECLAPTNPCSFDCRNTEGSYECICPKGYQIDAD
NSACVDVDECGGQQSSCAGSCQNIPGSFRCLCSRGFRPTMYGRGCQDVNECAHSPCSQGQ
SCSNRVGSFQCGCPSGLAKMRGGCGDVDECQMGGGSCNFGCRNSYGGFSCSCRGGFFRMG
SGHCMSGHFEQRVPRFPQFPQFGGYGGPQMGMPPNGGFQGAMRPKDSVCYACMPGGDTRR
RHKRSADGGRFIEVSNRHGRGTVNTSYPLEVHLNRATLTRRTPILELQPSLKQLRNNVRY
RIVSGNDDRKFRLNPRGSSSVLHFTEEGLQQDLAGVASELTIRGSTTLSKDEVKQVALDS
DLLEKAIEDILEFHVQIHVNQP
Nucleotide sequence
Length: 3,128
>KH2012:KH.C3.225.v8.C.SL2-1
ATTACCGAAAGGGCCCATGTTTCCACACACGAGTTAACGGGACCTGCAAAGACGAAGTTC
CAGGGGTTATGTGTACCAAGCTCTTCTGTTGTGCTACTGTGGGAGAAGGATGGGGCCATC
CGTGCGAGGAATGTCCCGCCCGAGTCGGAAATTGTACCAAGGGTAGACTACCCCCTCTGT
GCACAGACATTGATGAGTGCGAAATAATGCCGGGTCTTTGCGAGGGAGGAACTTGCAGAA
ATACTGACGGATCTTTTGCCTGTGATTGCCCTGAAGGGTACAGAGCTGACACTAATATTC
ACCAGTGCGTAGATGTGAACGAATGCGCAAGCTCCGATGTCTGCGTCTACGGCAACTGTA
TCAACACGGATGGAGGCTTTATATGCGAATGCCCGCCAGATTACAAACTCTCAATTGACA
AGACATACTGCATATCTGATAAACCCGGACGATGTTACACCGCCATTGAAAGTGGTATGT
GCGCAAGACCCTTGTCTGAGTTGGTACGACGGACTATGTGTTGTTGCACCCCTACTGGGG
AGGAAACACTTGGAAAATGTTTTGCCGCGGTTGGGGAGTTCCCCGAACGATGCCCTGCTG
TTGGGACACCGGAGTTCAACAGAGATTGCGAAGGTGTAACAACCGGCGAAGTTATACCTG
GCGGTGGACTTTGTGAGCTTATGGGTGATCGCGCATGCGCACACGGTCGATGCGTCAACC
AACCAGAACAACATACTTACTTCTGTGAGTGCGAGGCCGGCTACGAATCAGCGGACGGTG
GAAAGCAATGTGTTGACGTGGACGAATGCACACAAGCCGGCTCTGCTTATCCAAGTGTAT
GCGGACCACACGGTACTTGCTTGAACACTGAAGGATCGTACACTTGCCACTGCTCCAGAG
GTTTCGAGAACGACGCTGGTAGCATGATCTCGTGCGTAGATATTGATGAATGTACCCAAG
ACGGCTTATGCGAGAACGGTGCATGTGTGAACACAAGGGGAAGCTACGTATGCAACTGCA
ATGACGGCTACAGGACCTCTGCTACACAACTGGAGTGCGAAGACATTGATGAATGTTTGG
ATAACAATGGTGGTTGTCACATGGGATGCACCGATACCATTGGTTCTTACGAATGTAGTT
GTGATGATGGGTTTGTGCTTGCTTTCGACGGACACACTTGTGCAGATGAGGATGAATGCG
AGATGTCGAAACACAATTGCCACGTGAATGCTGATTGTAACAACACAGAGGGAGGATACA
ACTGCCGTTGTATTCCTGGTTTCCATGGAGATGGATTCATGTGCCACGGCGCAAACTGTA
CAGATGTTGATGAATGCTCAGATCTTGCCAACTGTATCAATGGTATGTGCGTCAACACCG
ACGGCGCATATGAGTGTCAATGTCCAGAAGGTTTCCAGAGTAACCCTACAGGCATTGGTT
GTGTTGACCTCAACGAATGTGATGAAAACAACCCATGCGTCAACGGCCGATGTGTCAACC
AACCGGGTAGCTTCCGTTGCGAATGCACCAACGGGTTCACACTCGATGCATCCGGTGTGG
TGTGCGTTGATGTCAACGAATGCAAACCTGGATTGAACAACAACTGTGCTTTCCGCTGCG
TAAACGACATCGGCAGCTTCCATTGTGCTTGCCCTGATGGTTACGAACTTCGTGAAGATG
GAAACACTTGCAAAGATATCAACGAATGTCTTGCACCAACCAACCCATGCAGCTTTGATT
GCCGAAACACAGAGGGAAGTTACGAATGTATTTGCCCCAAGGGTTACCAGATCGATGCTG
ATAATAGTGCTTGTGTTGATGTTGATGAATGTGGCGGGCAACAAAGCTCGTGCGCTGGAA
GTTGCCAGAACATCCCAGGTTCCTTCAGATGTCTTTGTTCCCGAGGTTTCCGACCCACTA
TGTACGGTAGAGGTTGCCAAGATGTGAACGAATGCGCTCACAGCCCGTGCTCGCAAGGAC
AAAGCTGTTCCAACAGGGTTGGATCGTTCCAATGTGGATGTCCATCAGGATTGGCGAAGA
TGCGCGGAGGATGCGGTGACGTTGATGAGTGCCAGATGGGAGGAGGAAGCTGCAACTTTG
GATGCCGAAATAGTTACGGAGGATTCTCTTGCAGCTGCAGAGGTGGTTTCTTCCGCATGG
GCAGTGGACATTGCATGAGCGGCCACTTTGAACAAAGAGTTCCAAGATTCCCACAATTCC
CTCAGTTTGGTGGCTACGGTGGTCCACAGATGGGCATGCCTCCAAATGGTGGATTCCAGG
GTGCTATGAGGCCCAAGGATAGCGTGTGCTATGCGTGCATGCCAGGTGGTGACACACGAC
GTAGACATAAGAGGTCTGCTGATGGTGGAAGATTTATCGAAGTTTCGAACCGTCATGGCA
GAGGAACTGTCAACACCAGCTACCCCCTTGAGGTTCACCTGAATCGCGCCACACTCACAC
GCCGCACACCCATCTTGGAGCTGCAACCTTCCCTGAAACAACTTCGCAACAACGTCCGTT
ACCGCATCGTGTCCGGAAACGACGATCGCAAATTCCGTCTCAACCCACGAGGAAGCTCCA
GCGTCCTCCACTTCACCGAGGAAGGTCTTCAACAAGATCTCGCCGGAGTCGCAAGTGAGC
TCACCATCCGAGGATCAACAACCTTAAGCAAGGATGAAGTGAAGCAAGTTGCTCTCGACA
GCGATCTTCTTGAGAAAGCTATTGAAGATATCCTGGAGTTCCACGTCCAGATCCATGTCA
ACCAGCCTTAGATTTCTCTTCACCACTGGACAGATTATTTAATAGGACTGGCGGCTTGTA
GAAAAACTGCATCCGCCTTAAATTTGGTTTTGTGTTTGACTATAAGCGATTACGTCATTT
TAGTGTCATTACTACGTATTTTGACACGTCATCACTATTTAGCGCCGCACATAACGTATA
ACCCTCCATGAAAATTTTTCAAGCGAAAAAAAACACCTTTCACACTAACGTCTGCCTGTA
ACTACCGAAACTTTTCAGTGGTCTATAAATGCAGCATATTTCTTATTGTTTTATAGGCTA
ATTGTATCGCTTTGTGCCTTAATTGTACATAGGTATAACCGTTGCAGCCGTTTTCTATGC
TACACAGT
| SUPERFAMILY |
TB_dom_sf (IPR036773) - T[2-80] 1.41E-12 - T[141-211] 1.83E-7 |
| Gene3D |
TB_dom_sf (IPR036773) - T[3-64] 3.7E-10 |
| ProSiteProfiles |
TB_dom (IPR017878) - T[4-47] 13.151 - T[149-209] 13.771 |
| Pfam |
TB_dom (IPR017878) - T[15-47] 1.3E-6 - T[159-210] 1.7E-9 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[62-103] 2.6E-10 - T[104-144] 1.4E-8 - T[206-264] 0.23 - T[265-312] 1.6E-11 - T[313-353] 8.4E-11 - T[354-394] 2.5E-7 - T[395-440] 5.6E-5 - T[441-481] 2.2E-9 - T[482-522] 6.7E-11 - T[523-564] 2.1E-10 - T[565-605] 9.1E-10 - T[606-646] 4.9E-9 - T[647-685] 8.2E-9 - T[686-725] 1.7E-5 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[62-103] 11.187 - T[104-144] 9.984 - T[220-264] 7.233 - T[265-307] 12.576 - T[313-353] 11.101 - T[354-394] 7.616 - T[395-433] 14.218 - T[441-481] 9.731 - T[482-518] 13.659 - T[523-564] 7.91 - T[565-605] 7.965 - T[606-646] 8.698 - T[647-683] 10.883 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[62-102] 2.6E-9 - T[104-143] 2.0E-6 - T[265-305] 3.3E-8 - T[313-352] 2.5E-7 - T[441-480] 2.4E-8 - T[482-521] 7.5E-6 - T[523-563] 2.4E-8 - T[565-604] 8.2E-10 - T[606-642] 3.1E-8 - T[647-678] 2.4E-7 - T[686-720] 5.2E-5 |
| SMART |
EGF-like_dom (IPR000742) - T[65-103] 6.6E-4 - T[107-144] 1.1E-4 - T[223-264] 0.027 - T[268-312] 0.008 - T[316-353] 4.7E-4 - T[357-394] 0.024 - T[398-435] 0.027 - T[444-481] 0.0018 - T[485-522] 4.3E-6 - T[526-564] 1.1E-4 - T[568-605] 0.0012 - T[609-646] 4.5 - T[650-685] 0.11 - T[689-725] 43.0 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[78-89] . - T[119-130] . - T[286-297] . - T[328-339] . - T[369-380] . - T[412-423] . - T[456-467] . - T[497-508] . - T[539-550] . - T[580-591] . - T[621-632] . - T[662-673] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[87-102] . - T[248-263] . - T[337-352] . - T[378-393] . - T[465-480] . - T[548-563] . - T[589-604] . - T[630-645] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[104-128] . - T[265-295] . - T[395-421] . - T[647-671] . - T[686-710] . |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[223-358] 9.42E-12 - T[352-489] 3.45E-17 - T[450-565] 5.65E-18 - T[566-678] 5.49E-14 |
| Pfam |
EGF_dom (IPR024731) - T[399-434] 6.6E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBN3_HUMAN | 34.637 % | 389 | 4.33E-115 |
| FBN1_HUMAN | 33.789 % | 415 | 3.71E-124 |
| FBN2_HUMAN | 32.771 % | 410 | 1.54E-122 |