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TRANSCRIPT CARD

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  1. EST 'AHC0AAA20YP04_RM1'
  2. Transcript 'Phmamm.CG.MTP2014.S3...'
  3. Transcript 'KH2012:KH.C8.611.v1....'
  4. Transcript 'KH2012:KH.C3.226.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.226.v1.A.nonSL4-1

Possible name(s)

KH.C3.226

Location

KhC3 [3,332,888 / 3,339,729]

Sequences

Amino acid sequence

Length: 573

>KH.C3.226.v1.A.nonSL4-1
RNNFRRFEQGKMIASSFENVPPIPTSPPPPPPTSPPPTSPPPASPSPDPIKPSKGMLDQR
TFKRIVALISIFITLIGIALVIVACTIDPDDFDESRVAFDGDIQLEEDDDGFIQWDDAYS
DPDSDKSRKLEHKLSRKIKAALDEEGFMVDRVEIKSLSKAAPRMINRNEEIKNVTDKKFG
TANAKYANKKYNGISFVKVKYVVFGKPSKNAATFQSAKYKSWWKMRGRLRTRLANNGLRA
TVKRLDRSPSFSWAIKRGMRRHYKFTTIPPPKQEAVPCTCKENLFKELNPMNPSKVCQCQ
SACIEDETTVYGGKDDIFAIFTPLCASAYYAGIISDTGGIVEVLYTGRQEVMPGNKTVAG
FTSSKVDFIPKTITLKALGSLIIPTEPPPPLSYEGSGFAPITTTENPFLKTTTSMMSQAA
LAVQADDDDDDFASIPKLLKKYNNEPIVFHLHIKEIDKRKMQYNKIIFSARKHHILEDFG
RKLNPMVKAKLVEMGFQGITVDFVQFHRVGEELGFAGGFAISGNIATLAKTIKKLETTES
NGGSPWRALETIGKVINKRYSKALLETLQRQDG

Nucleotide sequence

Length: 1,838

>KH2012:KH.C3.226.v1.A.nonSL4-1
AGATGCAGCAAGCAGTTCACACACTGCGTTACTTGGTTGCTTGACGCAACAACTTTAGAC
GTTTTGAGCAAGGCAAAATGATAGCGAGTTCGTTTGAAAATGTTCCACCAATTCCTACTT
CACCACCCCCACCCCCACCGACGTCACCCCCACCAACGTCACCTCCACCGGCGTCGCCCT
CACCTGACCCTATTAAGCCTTCTAAAGGAATGCTGGATCAGAGAACCTTTAAAAGGATTG
TTGCATTGATTTCTATCTTTATAACGTTGATAGGAATTGCTCTTGTTATTGTAGCTTGCA
CGATTGACCCAGATGACTTTGATGAGAGTCGTGTGGCTTTCGATGGAGATATCCAGCTAG
AGGAGGATGATGATGGTTTCATCCAGTGGGACGACGCCTACAGTGATCCTGATTCGGATA
AATCTCGAAAATTGGAACATAAGCTGTCGAGAAAAATTAAAGCAGCTTTGGATGAAGAAG
GTTTTATGGTAGACAGAGTGGAAATTAAATCTTTATCTAAGGCAGCTCCCCGCATGATAA
ACCGAAATGAAGAAATTAAAAATGTCACGGATAAAAAGTTTGGTACTGCTAATGCAAAGT
ATGCAAACAAAAAGTACAATGGGATATCCTTTGTGAAAGTTAAGTACGTGGTGTTTGGGA
AACCTTCCAAAAATGCAGCTACGTTTCAAAGTGCGAAATATAAGTCCTGGTGGAAAATGA
GGGGCAGGTTGCGTACCAGACTAGCTAATAACGGTCTTCGTGCAACAGTAAAGCGACTTG
ATCGCTCACCTTCCTTTAGCTGGGCGATAAAGAGAGGAATGAGACGACACTATAAATTCA
CCACCATTCCTCCTCCTAAACAAGAAGCTGTTCCTTGCACCTGTAAAGAAAATCTCTTCA
AAGAACTAAACCCAATGAATCCATCTAAAGTGTGTCAGTGTCAATCTGCATGTATTGAAG
ATGAGACCACTGTGTATGGTGGAAAGGATGATATATTTGCTATATTTACGCCACTGTGTG
CATCTGCATACTATGCTGGGATTATATCAGATACTGGTGGTATAGTGGAAGTCCTATATA
CTGGAAGGCAAGAAGTCATGCCTGGTAATAAAACAGTTGCAGGATTTACTTCAAGCAAGG
TTGACTTTATTCCCAAAACTATAACTTTAAAAGCTTTAGGCAGTTTGATAATTCCCACCG
AACCACCTCCCCCTTTAAGCTATGAAGGCAGTGGTTTTGCACCAATCACCACAACTGAGA
ATCCTTTCCTTAAAACAACAACATCAATGATGTCACAAGCAGCATTGGCTGTGCAAGCTG
ATGATGATGATGATGATTTTGCATCGATACCAAAGCTGTTAAAGAAATACAACAACGAAC
CAATTGTATTTCATTTGCATATAAAAGAAATCGATAAACGGAAAATGCAATACAACAAGA
TCATATTCAGTGCCAGGAAGCATCATATCTTAGAAGATTTTGGACGCAAACTTAACCCAA
TGGTCAAGGCCAAGTTAGTAGAAATGGGGTTTCAAGGTATCACTGTTGACTTTGTTCAGT
TCCACAGAGTTGGTGAAGAACTTGGCTTTGCTGGTGGTTTTGCAATCTCAGGAAACATTG
CTACATTGGCCAAGACAATAAAAAAGTTGGAAACCACGGAATCTAATGGTGGTTCACCAT
GGAGAGCATTGGAAACAATTGGAAAAGTTATAAACAAGAGATACAGCAAAGCATTACTTG
AGACTCTGCAGCGTCAAGATGGATAGTAGAAACATATGTTGAGTTCGATGTTGCATTTGA
TGCCGTTTGTTTTGATAAATAAATATTTAAAACCCTTA

InterProScan

ProSiteProfiles
LCCL (IPR004043) - T[272-343] 13.978
Gene3D
LCCL_sf (IPR036609) - T[274-375] 9.5E-7
SUPERFAMILY
LCCL_sf (IPR036609) - T[279-357] 3.66E-10
Pfam
LCCL (IPR004043) - T[280-362] 1.5E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value