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  1. Transcript 'KH2012:KH.C3.226.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.226.v1.A.SL1-1

Possible name(s)

KH.C3.226

Location

KhC3 [3,332,794 / 3,339,729]

Sequences

Amino acid sequence

Length: 573

>KH.C3.226.v1.A.SL1-1
RNNFRRFEQGKMIASSFENVPPIPTSPPPPPPTSPPPTSPPPASPSPDPIKPSKGMLDQR
TFKRIVALISIFITLIGIALVIVACTIDPDDFDESRVAFDGDIQLEEDDDGFIQWDDAYS
DPDSDKSRKLEHKLSRKIKAALDEEGFMVDRVEIKSLSKAAPRMINRNEEIKNVTDKKFG
TANAKYANKKYNGISFVKVKYVVFGKPSKNAATFQSAKYKSWWKMRGRLRTRLANNGLRA
TVKRLDRSPSFSWAIKRGMRRHYKFTTIPPPKQEAVPCTCKENLFKELNPMNPSKVCQCQ
SACIEDETTVYGGKDDIFAIFTPLCASAYYAGIISDTGGIVEVLYTGRQEVMPGNKTVAG
FTSSKVDFIPKTITLKALGSLIIPTEPPPPLSYEGSGFAPITTTENPFLKTTTSMMSQAA
LAVQADDDDDDFASIPKLLKKYNNEPIVFHLHIKEIDKRKMQYNKIIFSARKHHILEDFG
RKLNPMVKAKLVEMGFQGITVDFVQFHRVGEELGFAGGFAISGNIATLAKTIKKLETTES
NGGSPWRALETIGKVINKRYSKALLETLQRQDG

Nucleotide sequence

Length: 1,932

>KH2012:KH.C3.226.v1.A.SL1-1
TTTCAGTTTTTATCTCGAACATTCGTTTACGTCTAGTCCAGTGAATTGTTACGTCACAAT
GGTCTAATTCGAAATTCCTACCCAACGTCCAATCAGATGCAGCAAGCAGTTCACACACTG
CGTTACTTGGTTGCTTGACGCAACAACTTTAGACGTTTTGAGCAAGGCAAAATGATAGCG
AGTTCGTTTGAAAATGTTCCACCAATTCCTACTTCACCACCCCCACCCCCACCGACGTCA
CCCCCACCAACGTCACCTCCACCGGCGTCGCCCTCACCTGACCCTATTAAGCCTTCTAAA
GGAATGCTGGATCAGAGAACCTTTAAAAGGATTGTTGCATTGATTTCTATCTTTATAACG
TTGATAGGAATTGCTCTTGTTATTGTAGCTTGCACGATTGACCCAGATGACTTTGATGAG
AGTCGTGTGGCTTTCGATGGAGATATCCAGCTAGAGGAGGATGATGATGGTTTCATCCAG
TGGGACGACGCCTACAGTGATCCTGATTCGGATAAATCTCGAAAATTGGAACATAAGCTG
TCGAGAAAAATTAAAGCAGCTTTGGATGAAGAAGGTTTTATGGTAGACAGAGTGGAAATT
AAATCTTTATCTAAGGCAGCTCCCCGCATGATAAACCGAAATGAAGAAATTAAAAATGTC
ACGGATAAAAAGTTTGGTACTGCTAATGCAAAGTATGCAAACAAAAAGTACAATGGGATA
TCCTTTGTGAAAGTTAAGTACGTGGTGTTTGGGAAACCTTCCAAAAATGCAGCTACGTTT
CAAAGTGCGAAATATAAGTCCTGGTGGAAAATGAGGGGCAGGTTGCGTACCAGACTAGCT
AATAACGGTCTTCGTGCAACAGTAAAGCGACTTGATCGCTCACCTTCCTTTAGCTGGGCG
ATAAAGAGAGGAATGAGACGACACTATAAATTCACCACCATTCCTCCTCCTAAACAAGAA
GCTGTTCCTTGCACCTGTAAAGAAAATCTCTTCAAAGAACTAAACCCAATGAATCCATCT
AAAGTGTGTCAGTGTCAATCTGCATGTATTGAAGATGAGACCACTGTGTATGGTGGAAAG
GATGATATATTTGCTATATTTACGCCACTGTGTGCATCTGCATACTATGCTGGGATTATA
TCAGATACTGGTGGTATAGTGGAAGTCCTATATACTGGAAGGCAAGAAGTCATGCCTGGT
AATAAAACAGTTGCAGGATTTACTTCAAGCAAGGTTGACTTTATTCCCAAAACTATAACT
TTAAAAGCTTTAGGCAGTTTGATAATTCCCACCGAACCACCTCCCCCTTTAAGCTATGAA
GGCAGTGGTTTTGCACCAATCACCACAACTGAGAATCCTTTCCTTAAAACAACAACATCA
ATGATGTCACAAGCAGCATTGGCTGTGCAAGCTGATGATGATGATGATGATTTTGCATCG
ATACCAAAGCTGTTAAAGAAATACAACAACGAACCAATTGTATTTCATTTGCATATAAAA
GAAATCGATAAACGGAAAATGCAATACAACAAGATCATATTCAGTGCCAGGAAGCATCAT
ATCTTAGAAGATTTTGGACGCAAACTTAACCCAATGGTCAAGGCCAAGTTAGTAGAAATG
GGGTTTCAAGGTATCACTGTTGACTTTGTTCAGTTCCACAGAGTTGGTGAAGAACTTGGC
TTTGCTGGTGGTTTTGCAATCTCAGGAAACATTGCTACATTGGCCAAGACAATAAAAAAG
TTGGAAACCACGGAATCTAATGGTGGTTCACCATGGAGAGCATTGGAAACAATTGGAAAA
GTTATAAACAAGAGATACAGCAAAGCATTACTTGAGACTCTGCAGCGTCAAGATGGATAG
TAGAAACATATGTTGAGTTCGATGTTGCATTTGATGCCGTTTGTTTTGATAAATAAATAT
TTAAAACCCTTA

InterProScan

ProSiteProfiles
LCCL (IPR004043) - T[272-343] 13.978
Gene3D
LCCL_sf (IPR036609) - T[274-375] 9.5E-7
SUPERFAMILY
LCCL_sf (IPR036609) - T[279-357] 3.66E-10
Pfam
LCCL (IPR004043) - T[280-362] 1.5E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value