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  1. Transcript 'KH2012:KH.C3.226.v3....'

Transcript Model

Transcript Id

KH2012:KH.C3.226.v3.A.SL5-1

Possible name(s)

KH.C3.226

Location

KhC3 [3,333,619 / 3,339,729]

Sequences

Amino acid sequence

Length: 565

>KH.C3.226.v3.A.SL5-1
QGKMIASSFENVPPIPTSPPPPPPTSPPPTSPPPASPSPDPIKPSKGMLDQRTFKRIVAL
ISIFITLIGIALVIVACTIDPDDFDESRVAFDGDIQLEEDDDGFIQWDDAYSDPDSDKSR
KLEHKLSRKIKAALDEEGFMVDRVEIKSLSKAAPRMINRNEEIKNVTDKKFGTANAKYAN
KKYNGISFVKVKYVVFGKPSKNAATFQSAKYKSWWKMRGRLRTRLANNGLRATVKRLDRS
PSFSWAIKRGMRRHYKFTTIPPPKQEAVPCTCKENLFKELNPMNPSKVCQCQSACIEDET
TVYGGKDDIFAIFTPLCASAYYAGIISDTGGIVEVLYTGRQEVMPGNKTVAGFTSSKVDF
IPKTITLKALGSLIIPTEPPPPLSYEGSGFAPITTTENPFLKTTTSMMSQAALAVQADDD
DDDFASIPKLLKKYNNEPIVFHLHIKEIDKRKMQYNKIIFSARKHHILEDFGRKLNPMVK
AKLVEMGFQGITVDFVQFHRVGEELGFAGGFAISGNIATLAKTIKKLETTESNGGSPWRA
LETIGKVINKRYSKALLETLQRQDG

Nucleotide sequence

Length: 1,770

>KH2012:KH.C3.226.v3.A.SL5-1
CAAGGCAAAATGATAGCGAGTTCGTTTGAAAATGTTCCACCAATTCCTACTTCACCACCC
CCACCCCCACCGACGTCACCCCCACCAACGTCACCTCCACCGGCGTCGCCCTCACCTGAC
CCTATTAAGCCTTCTAAAGGAATGCTGGATCAGAGAACCTTTAAAAGGATTGTTGCATTG
ATTTCTATCTTTATAACGTTGATAGGAATTGCTCTTGTTATTGTAGCTTGCACGATTGAC
CCAGATGACTTTGATGAGAGTCGTGTGGCTTTCGATGGAGATATCCAGCTAGAGGAGGAT
GATGATGGTTTCATCCAGTGGGACGACGCCTACAGTGATCCTGATTCGGATAAATCTCGA
AAATTGGAACATAAGCTGTCGAGAAAAATTAAAGCAGCTTTGGATGAAGAAGGTTTTATG
GTAGACAGAGTGGAAATTAAATCTTTATCTAAGGCAGCTCCCCGCATGATAAACCGAAAT
GAAGAAATTAAAAATGTCACGGATAAAAAGTTTGGTACTGCTAATGCAAAGTATGCAAAC
AAAAAGTACAATGGGATATCCTTTGTGAAAGTTAAGTACGTGGTGTTTGGGAAACCTTCC
AAAAATGCAGCTACGTTTCAAAGTGCGAAATATAAGTCCTGGTGGAAAATGAGGGGCAGG
TTGCGTACCAGACTAGCTAATAACGGTCTTCGTGCAACAGTAAAGCGACTTGATCGCTCA
CCTTCCTTTAGCTGGGCGATAAAGAGAGGAATGAGACGACACTATAAATTCACCACCATT
CCTCCTCCTAAACAAGAAGCTGTTCCTTGCACCTGTAAAGAAAATCTCTTCAAAGAACTA
AACCCAATGAATCCATCTAAAGTGTGTCAGTGTCAATCTGCATGTATTGAAGATGAGACC
ACTGTGTATGGTGGAAAGGATGATATATTTGCTATATTTACGCCACTGTGTGCATCTGCA
TACTATGCTGGGATTATATCAGATACTGGTGGTATAGTGGAAGTCCTATATACTGGAAGG
CAAGAAGTCATGCCTGGTAATAAAACAGTTGCAGGATTTACTTCAAGCAAGGTTGACTTT
ATTCCCAAAACTATAACTTTAAAAGCTTTAGGCAGTTTGATAATTCCCACCGAACCACCT
CCCCCTTTAAGCTATGAAGGCAGTGGTTTTGCACCAATCACCACAACTGAGAATCCTTTC
CTTAAAACAACAACATCAATGATGTCACAAGCAGCATTGGCTGTGCAAGCTGATGATGAT
GATGATGATTTTGCATCGATACCAAAGCTGTTAAAGAAATACAACAACGAACCAATTGTA
TTTCATTTGCATATAAAAGAAATCGATAAACGGAAAATGCAATACAACAAGATCATATTC
AGTGCCAGGAAGCATCATATCTTAGAAGATTTTGGACGCAAACTTAACCCAATGGTCAAG
GCCAAGTTAGTAGAAATGGGGTTTCAAGGTATCACTGTTGACTTTGTTCAGTTCCACAGA
GTTGGTGAAGAACTTGGCTTTGCTGGTGGTTTTGCAATCTCAGGAAACATTGCTACATTG
GCCAAGACAATAAAAAAGTTGGAAACCACGGAATCTAATGGTGGTTCACCATGGAGAGCA
TTGGAAACAATTGGAAAAGTTATAAACAAGAGATACAGCAAAGCATTACTTGAGACTCTG
CAGCGTCAAGATGGATAGTAGAAACATATGTTGAGTTCGATGTTGCATTTGATGCCGTTT
GTTTTGATAAATAAATATTTAAAACCCTTA

InterProScan

ProSiteProfiles
LCCL (IPR004043) - T[264-335] 13.978
Gene3D
LCCL_sf (IPR036609) - T[266-367] 9.3E-7
SUPERFAMILY
LCCL_sf (IPR036609) - T[271-349] 3.53E-10
Pfam
LCCL (IPR004043) - T[272-354] 1.5E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value