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  1. Transcript 'KH2012:KH.C3.257.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.257.v1.C.nonSL5-1

Possible name(s)

SPTB; SPTBN1; SPTBN2

Gene model

KH2012:KH.C3.257

Location

KhC3 [5,181,552 / 5,188,618]

Sequences

Amino acid sequence

Length: 630

>KH.C3.257.v1.C.nonSL5-1
EQGQDFDHVSFNDFRRDTIKTGEERVADAIRMSDELIDAGHTDAPEIANWKDTISEAWAD
LLELIDTRVEMLAAAYALHKFHYDGAEILARIQEKRQEVPDELGRDHDAVENFQREHDIF
AQDIKAIGLQVEVITAAGNELQEGYAGDDLHEIEKKIEAVQSAWNNLLTLVKKRAALLSD
ALNKFRFMNLCRDLMDWMETTVRQIDLQEKPRDVSGVETAMSVHQGTKAEIDARNSSFEE
CTELGHHLLNTGHYASDEIQVKLNELSAKRNHVVDRWQEKWDLLNLLMEVYQFAHDANAC
DAWVQQQNALIRDMPVDSCRSADDADQLLRRLDGFEKAAVPWEERFAALEKLTEMEIRDE
AARKLAKEEMERKRKEEEEEQERRRIEEEEAQKIREEAEKEAARVQAIVDAETPTIQIVN
PEGHEASLVNGMNGETSGDGAGDAEDRRTPEVQSHEGPLQRKQERDIDGKRASNSSLSSS
NESLDGAKKSKKKNKKLPKKKSKHIDSEPLHGTSSAPSYIEPVVVEQSTGVQYDQTPVKM
RPKPVQDQTPREHPHEGYLKRKSTIVEIASDYKKRKNVLRLKLSSGMEYLLQAKDEVIPY
KLIMLGATAMFMHVLTLVVLLFILFSSFFK

Nucleotide sequence

Length: 1,894

>KH2012:KH.C3.257.v1.C.nonSL5-1
GGAGCAAGGGCAGGACTTTGATCATGTTTCATTCAATGACTTCCGACGAGACACGATCAA
GACCGGGGAGGAAAGAGTCGCTGATGCGATCCGGATGTCTGACGAACTCATCGATGCTGG
CCACACGGATGCGCCAGAGATCGCAAACTGGAAAGACACGATAAGCGAGGCTTGGGCCGA
TCTGCTCGAGCTTATCGACACCAGAGTTGAGATGCTTGCTGCTGCATATGCTCTCCACAA
ATTCCATTATGATGGAGCTGAGATCCTTGCAAGGATCCAGGAGAAGAGACAGGAAGTTCC
TGATGAACTTGGACGAGACCACGATGCTGTGGAAAACTTCCAGCGTGAACATGATATATT
TGCTCAGGATATCAAAGCTATCGGACTACAGGTTGAAGTCATCACGGCAGCCGGAAACGA
GCTTCAAGAGGGATACGCAGGTGATGATCTTCACGAGATTGAAAAGAAGATAGAGGCTGT
GCAGAGTGCGTGGAATAATCTTCTCACTTTGGTGAAGAAGAGAGCTGCTCTTCTATCTGA
TGCTCTCAATAAATTCCGCTTCATGAATTTGTGTCGGGACCTCATGGACTGGATGGAGAC
TACTGTACGACAGATTGACTTGCAGGAGAAGCCAAGAGACGTTTCTGGTGTTGAGACTGC
AATGAGTGTCCACCAAGGCACAAAAGCAGAGATTGACGCTCGTAACAGCAGTTTCGAGGA
ATGCACAGAACTTGGCCACCATCTTCTTAACACTGGCCATTATGCTAGTGATGAAATACA
AGTCAAGTTGAACGAATTGTCCGCAAAACGAAATCATGTGGTTGATCGCTGGCAAGAGAA
ATGGGACTTGCTTAACTTGTTGATGGAGGTGTACCAGTTCGCACACGATGCCAATGCATG
TGATGCGTGGGTCCAACAACAGAATGCGCTCATCCGTGACATGCCCGTCGACTCTTGCAG
GTCAGCTGATGATGCTGACCAGTTGCTACGACGATTAGATGGGTTCGAGAAAGCAGCCGT
GCCTTGGGAAGAAAGATTTGCTGCTTTGGAGAAATTAACAGAGATGGAAATACGTGACGA
AGCTGCTCGCAAACTCGCGAAAGAAGAGATGGAAAGAAAGAGAAAGGAGGAAGAAGAAGA
GCAAGAAAGGAGGAGAATAGAAGAGGAAGAAGCGCAGAAGATCAGGGAAGAGGCAGAGAA
GGAAGCAGCTCGTGTTCAAGCGATCGTGGATGCTGAAACACCAACGATTCAAATCGTTAA
TCCAGAGGGTCATGAGGCATCTCTCGTTAATGGGATGAACGGTGAAACCTCCGGGGACGG
AGCAGGTGATGCAGAGGATAGAAGAACGCCGGAGGTTCAGAGCCACGAAGGACCATTACA
ACGGAAACAGGAACGAGATATAGACGGGAAGAGAGCGTCAAACAGCTCCCTAAGCAGCAG
CAACGAGTCTTTGGACGGCGCTAAAAAATCCAAGAAGAAAAATAAAAAATTGCCGAAAAA
GAAATCCAAACATATTGACAGCGAACCACTGCATGGTACTTCATCTGCACCATCATACAT
AGAACCAGTGGTGGTTGAGCAATCCACCGGAGTCCAGTACGACCAGACACCGGTAAAAAT
GCGGCCAAAACCTGTTCAGGACCAAACACCAAGGGAACACCCTCATGAAGGCTACTTAAA
ACGCAAATCTACGATTGTTGAAATAGCTTCTGACTACAAGAAACGAAAGAATGTTCTGCG
ATTGAAACTTTCTAGTGGAATGGAATATCTGCTTCAAGCTAAAGATGAGGTTATTCCATA
TAAGCTTATTATGTTGGGTGCAACAGCCATGTTTATGCATGTTTTAACACTGGTTGTTTT
GCTGTTCATTCTCTTCTCTTCTTTCTTTAAATAA

InterProScan

Pfam
Spectrin_repeat (IPR002017) - T[18-72] 2.0E-5 - T[77-179] 8.1E-15 - T[185-284] 1.8E-17
SMART
Spectrin/alpha-actinin (IPR018159) - T[79-179] 2.9E-17 - T[185-285] 1.7E-20 - T[291-387] 1.6
Gene3D
PH-like_dom_sf (IPR011993) - T[448-598] 1.9E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPTB2_HUMAN 48.725 % 353 1.88E-106
SPTN2_HUMAN 44.167 % 311 6.04E-92
SPTB1_HUMAN 43.681 % 322 1.72E-95