- Transcript 'Harore.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.C3.264.v2....'
Transcript Model
Transcript Id
KH2012:KH.C3.264.v2.C.SL2-1
Possible name(s)
CADM1; CADM3; GPA33
Gene model
Location
KhC3 [3,829,642 / 3,837,892]
Amino acid sequence
Length: 634
>KH.C3.264.v2.C.SL2-1
FIKAYNLFSIQFGLYDNMTTGKTLWACVFIWCIMDFQADGFLNIVYDYDVSGVYGHPVEM
TCKVETEINKVVKEVKWYKVLNDGKVSVVYYYEPPKWDTPGLRYLDRVKLANDETSLVIS
SLDRNDESDYRCDVTVMVNETTPSEIPQEMSVTMHLTVFVPPSGIKLTTLTSGNNLTLTC
RSTRSKPSADITWIITTPEASWEIQSSKTVSEGPDTIGYLYQTITPKDKGTTFTCVVNHP
ETSTTLKKNVSLVEPSLQNQVPVYFDWLGAEVPYTTYATTQNTTDSVSQKKGGLVEMVIS
PAQTVEINTTVIAMATAEGAFPSPTFTWWGEDLETSNEPRLITHLEKSQVFFCLIENPVG
RVVMSVKFTAVPEGDPAIIGDNDQFVGDDEDETVLASGAVVAAIAFGGLLILFLLSFVIY
YFGCKRPTDRQLARRSVQEDGDFDSYVEKQKPLYGVSPSEETNQIKSLSNDHVNEIGPTH
EKDVLLTTGRVYDSPPSTKKNFYVDSTSTSTSGFSDDGNGKHLNDGRSSSHGSHKERAIT
KHLNDFDENASFCDEYGSRFGLDDNNISVPNVVEVEARESPFDASMKYQVTDDSSETSSI
VSGDTVEENRYAIAHHPDESWERIDPMKEVQTPV
Nucleotide sequence
Length: 2,113
>KH2012:KH.C3.264.v2.C.SL2-1
TTTATTAAGGCATACAATCTTTTTTCAATACAATTTGGATTATACGACAACATGACGACA
GGGAAGACACTCTGGGCCTGTGTATTTATATGGTGCATAATGGATTTCCAAGCTGACGGT
TTTCTAAACATTGTTTACGATTACGACGTATCTGGAGTCTATGGTCACCCTGTAGAAATG
ACTTGCAAAGTCGAAACAGAAATTAACAAAGTTGTAAAGGAAGTAAAATGGTACAAAGTG
TTAAACGATGGAAAAGTATCGGTAGTCTACTATTACGAACCGCCGAAATGGGACACGCCT
GGCCTCAGATATTTGGATCGTGTAAAACTGGCCAACGACGAAACGTCACTTGTAATATCT
TCACTGGACCGAAACGACGAGTCGGATTATCGTTGTGACGTCACAGTGATGGTGAATGAA
ACTACGCCGTCGGAAATTCCACAAGAAATGAGCGTTACTATGCATCTAACAGTATTCGTT
CCACCGAGCGGAATAAAGTTGACGACTCTCACTTCGGGCAACAACTTGACTTTGACTTGT
CGGTCAACAAGGTCCAAGCCCTCTGCTGACATCACGTGGATAATTACTACTCCGGAAGCT
TCGTGGGAAATTCAGTCTTCCAAGACGGTAAGCGAAGGACCAGACACGATAGGTTATTTG
TATCAAACAATAACTCCAAAAGACAAAGGCACAACGTTCACGTGTGTGGTCAACCACCCA
GAAACAAGTACAACACTTAAAAAGAACGTATCATTAGTTGAACCAAGCTTACAGAACCAA
GTGCCCGTTTACTTTGACTGGCTGGGTGCAGAAGTTCCATACACAACGTATGCAACCACC
CAAAATACTACAGATTCAGTGTCTCAGAAAAAGGGTGGTCTTGTGGAAATGGTGATCAGT
CCAGCTCAGACTGTCGAAATTAACACTACGGTTATAGCAATGGCAACCGCCGAAGGAGCC
TTTCCATCACCCACATTCACTTGGTGGGGTGAAGACTTAGAAACGTCCAACGAGCCAAGG
CTTATAACTCACCTTGAAAAATCACAAGTTTTCTTTTGTTTGATCGAAAATCCAGTGGGA
CGAGTCGTAATGTCAGTTAAATTTACAGCAGTACCTGAAGGTGATCCTGCTATAATTGGA
GATAATGATCAGTTTGTAGGAGATGATGAAGATGAGACGGTCCTTGCAAGTGGGGCAGTG
GTCGCTGCTATTGCATTCGGTGGATTGCTTATTCTATTCCTGCTTTCTTTCGTTATCTAC
TATTTTGGATGCAAAAGACCAACAGATCGACAGTTAGCGAGACGGAGTGTTCAGGAAGAC
GGAGACTTTGACTCCTACGTTGAAAAACAAAAACCTTTGTACGGTGTGAGCCCATCTGAA
GAAACCAATCAAATAAAAAGCTTATCCAATGACCATGTGAATGAAATTGGTCCGACACAC
GAAAAGGATGTTTTGCTGACTACCGGCCGCGTGTATGACTCTCCACCCTCAACTAAAAAG
AACTTCTACGTTGACTCGACGTCCACGTCCACATCTGGCTTTAGCGACGACGGAAACGGC
AAACATTTAAACGACGGTCGCTCTAGCTCACATGGATCTCATAAAGAGCGCGCAATTACT
AAGCACTTAAACGATTTCGATGAAAACGCCTCTTTTTGTGACGAATACGGATCCCGGTTT
GGCCTCGACGATAATAACATCTCGGTGCCGAACGTGGTCGAGGTTGAAGCCCGCGAAAGC
CCGTTTGATGCCTCGATGAAATACCAAGTCACTGACGATTCCAGTGAGACTTCCAGCATT
GTGAGTGGGGATACAGTTGAGGAAAACCGCTACGCTATTGCCCACCATCCAGACGAGAGC
TGGGAGCGAATAGATCCAATGAAAGAGGTTCAGACTCCGGTCTAAAAAACGTTCAATAAA
AAGCTACCATGTCCAAGACGCTCGGCTCAGTGAACTTATACACGCGAAAGGTCCGTAAAT
GCGATAGATTGCAATCGCAAAAGCTTTGTAAAAAGCTTGAAGAAAACTATAATGCATCGC
TATTATTTAGATCGAAATAGGTATTATCAATTATAGCGTACGTTAATTTTTTCAGATATC
ATATTTTATAATG
| PANTHER |
Nectin-2 (IPR033318) - T[38-243] 6.2E-20 - T[320-433] 6.2E-20 |
| Gene3D |
Ig-like_fold (IPR013783) - T[43-164] 3.8E-16 - T[165-254] 4.3E-12 |
| SMART |
Ig_sub (IPR003599) - T[47-159] 2.8E-4 - T[165-255] 11.0 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[48-163] 2.56E-12 - T[165-250] 2.38E-9 - T[300-369] 4.91E-5 |
| Pfam |
Ig_V-set (IPR013106) - T[50-142] 5.5E-8 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[55-153] 8.321 - T[162-251] 10.662 |
| SMART |
Ig_V-set (IPR013106) - T[57-134] 3.7E-4 |
| Pfam |
CD80_C2-set (IPR013162) - T[172-243] 1.3E-8 |
| ProSitePatterns |
Ig/MHC_CS (IPR003006) - T[233-239] . |
| Protein Name | Identity | Bit Score | e-value |
|---|