- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'KH2012:KH.C3.264.v3....'
Transcript Model
Transcript Id
KH2012:KH.C3.264.v3.R.ND3-1
Possible name(s)
CADM1; CADM3; GPA33
Gene model
Location
KhC3 [3,829,642 / 3,837,403]
Amino acid sequence
Length: 599
>KH.C3.264.v3.R.ND3-1
FQADGFLNIVYDYDVSGVYGHPVEMTCKVETEINKVVKEVKWYKVLNDGKVSVVYYYEPP
KWDTPGLRYLDRVKLANDETSLVISSLDRNDESDYRCDVTVMVNETTPSEIPQEMSVTMH
LTVFVPPSGIKLTTLTSGNNLTLTCRSTRSKPSADITWIITTPEASWEIQSSKTVSEGPD
TIGYLYQTITPKDKGTTFTCVVNHPETSTTLKKNVSLVEPSLQNQVPVYFDWLGAEVPYT
TYATTQNTTDSVSQKKGGLVEMVISPAQTVEINTTVIAMATAEGAFPSPTFTWWGEDLET
SNEPRLITHLEKSQVFFCLIENPVGRVVMSVKFTAVPEGDPAIIGDNDQFVGDDEDETVL
ASGAVVAAIAFGGLLILFLLSFVIYYFGCKRPTDRQLARRSVQEDGDFDSYVEKQKPLYG
VSPSEETNQIKSLSNDHVNEIGPTHEKDVLLTTGRVYDSPPSTKKNFYVDSTSTSTSGFS
DDGNGKHLNDGRSSSHGSHKERAITKHLNDFDENASFCDEYGSRFGLDDNNISVPNVVEV
EARESPFDASMKYQVTDDSSETSSIVSGDTVEENRYAIAHHPDESWERIDPMKEVQTPV
Nucleotide sequence
Length: 2,010
>KH2012:KH.C3.264.v3.R.ND3-1
ATTTCCAAGCTGACGGTTTTCTAAACATTGTTTACGATTACGACGTATCTGGAGTCTATG
GTCACCCTGTAGAAATGACTTGCAAAGTCGAAACAGAAATTAACAAAGTTGTAAAGGAAG
TAAAATGGTACAAAGTGTTAAACGATGGAAAAGTATCGGTAGTCTACTATTACGAACCGC
CGAAATGGGACACGCCTGGCCTCAGATATTTGGATCGTGTAAAACTGGCCAACGACGAAA
CGTCACTTGTAATATCTTCACTGGACCGAAACGACGAGTCGGATTATCGTTGTGACGTCA
CAGTGATGGTGAATGAAACTACGCCGTCGGAAATTCCACAAGAAATGAGCGTTACTATGC
ATCTAACAGTATTCGTTCCACCGAGCGGAATAAAGTTGACGACTCTCACTTCGGGCAACA
ACTTGACTTTGACTTGTCGGTCAACAAGGTCCAAGCCCTCTGCTGACATCACGTGGATAA
TTACTACTCCGGAAGCTTCGTGGGAAATTCAGTCTTCCAAGACGGTAAGCGAAGGACCAG
ACACGATAGGTTATTTGTATCAAACAATAACTCCAAAAGACAAAGGCACAACGTTCACGT
GTGTGGTCAACCACCCAGAAACAAGTACAACACTTAAAAAGAACGTATCATTAGTTGAAC
CAAGCTTACAGAACCAAGTGCCCGTTTACTTTGACTGGCTGGGTGCAGAAGTTCCATACA
CAACGTATGCAACCACCCAAAATACTACAGATTCAGTGTCTCAGAAAAAGGGTGGTCTTG
TGGAAATGGTGATCAGTCCAGCTCAGACTGTCGAAATTAACACTACGGTTATAGCAATGG
CAACCGCCGAAGGAGCCTTTCCATCACCCACATTCACTTGGTGGGGTGAAGACTTAGAAA
CGTCCAACGAGCCAAGGCTTATAACTCACCTTGAAAAATCACAAGTTTTCTTTTGTTTGA
TCGAAAATCCAGTGGGACGAGTCGTAATGTCAGTTAAATTTACAGCAGTACCTGAAGGTG
ATCCTGCTATAATTGGAGATAATGATCAGTTTGTAGGAGATGATGAAGATGAGACGGTCC
TTGCAAGTGGGGCAGTGGTCGCTGCTATTGCATTCGGTGGATTGCTTATTCTATTCCTGC
TTTCTTTCGTTATCTACTATTTTGGATGCAAAAGACCAACAGATCGACAGTTAGCGAGAC
GGAGTGTTCAGGAAGACGGAGACTTTGACTCCTACGTTGAAAAACAAAAACCTTTGTACG
GTGTGAGCCCATCTGAAGAAACCAATCAAATAAAAAGCTTATCCAATGACCATGTGAATG
AAATTGGTCCGACACACGAAAAGGATGTTTTGCTGACTACCGGCCGCGTGTATGACTCTC
CACCCTCAACTAAAAAGAACTTCTACGTTGACTCGACGTCCACGTCCACATCTGGCTTTA
GCGACGACGGAAACGGCAAACATTTAAACGACGGTCGCTCTAGCTCACATGGATCTCATA
AAGAGCGCGCAATTACTAAGCACTTAAACGATTTCGATGAAAACGCCTCTTTTTGTGACG
AATACGGATCCCGGTTTGGCCTCGACGATAATAACATCTCGGTGCCGAACGTGGTCGAGG
TTGAAGCCCGCGAAAGCCCGTTTGATGCCTCGATGAAATACCAAGTCACTGACGATTCCA
GTGAGACTTCCAGCATTGTGAGTGGGGATACAGTTGAGGAAAACCGCTACGCTATTGCCC
ACCATCCAGACGAGAGCTGGGAGCGAATAGATCCAATGAAAGAGGTTCAGACTCCGGTCT
AAAAAACGTTCAATAAAAAGCTACCATGTCCAAGACGCTCGGCTCAGTGAACTTATACAC
GCGAAAGGTCCGTAAATGCGATAGATTGCAATCGCAAAAGCTTTGTAAAAAGCTTGAAGA
AAACTATAATGCATCGCTATTATTTAGATCGAAATAGGTATTATCAATTATAGCGTACGT
TAATTTTTTCAGATATCATATTTTATAATG
| PANTHER |
Nectin-2 (IPR033318) - T[8-208] 1.2E-19 - T[262-304] 1.2E-19 - T[285-398] 1.2E-19 |
| Gene3D |
Ig-like_fold (IPR013783) - T[8-129] 3.5E-16 - T[130-219] 3.9E-12 |
| SMART |
Ig_sub (IPR003599) - T[12-124] 2.8E-4 - T[130-220] 11.0 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[13-128] 2.29E-12 - T[130-215] 2.09E-9 - T[265-334] 4.62E-5 |
| Pfam |
Ig_V-set (IPR013106) - T[15-107] 5.0E-8 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[20-118] 8.321 - T[127-216] 10.662 |
| SMART |
Ig_V-set (IPR013106) - T[22-99] 3.7E-4 |
| Pfam |
CD80_C2-set (IPR013162) - T[137-208] 1.2E-8 |
| ProSitePatterns |
Ig/MHC_CS (IPR003006) - T[198-204] . |
| Protein Name | Identity | Bit Score | e-value |
|---|