- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.C3.308.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.308.v1.A.SL1-1
Possible name(s)
BHLHA15; NEUROG1; NEUROG2
Gene model
Location
KhC3 [5,367,498 / 5,370,657]
Amino acid sequence
Length: 552
>KH.C3.308.v1.A.SL1-1
YTMYGVHRHSATTSNRGAMYRDDVIELQHIPPPLLMAGGDATMHSEKELSPDSRYALRSR
YMRLCKDFNKYQQHCQGSSDQDIGDFHEIDGEQYQSSYLGSEGSLYADGFDEQAGTTVTF
PGEGQADIDLLDAILQENERANGSYHENCTTYPHSPPMLTQPRCQVAHHNDSMAGAYVMR
QGLNPSSNNNNNSMFNTINKQGYSTTRNSESQSVVLSYKGSIGVRSLSYDNNHRTECESS
VSPGPNTIKTEKPTSIPSFQACENDEKVTSTLLPPISMLSGKSGAGSVHDTDGFSEPTVT
TMARDSTCNTEQEDGIFKAASTDEYFTQSETSNVKMIHTKRESEKSEASTSSCMFGQRAR
VQLSRSHSMSEAGSNNGTNGFLRSGAASSVGLKTSLISAAMKSAHTNTRKRRANSSSHST
STSKSSTDRGSVQQEPKNAKRLQSNERERLRMHQLNDAFQALRDICPHVKSERKLSKMET
LTLAHNYIASLSNMILTLEKSIQPENRLHSNGQPGKIAIIKSEANLMAPINVNCMPPLTV
PNQTNGNQPHAM
Nucleotide sequence
Length: 2,782
>KH2012:KH.C3.308.v1.A.SL1-1
AAGAATCACAGTTCTACATTGGTAATTATAAGATAATATACGATGTATGGTGTTCACCGC
CATTCTGCTACTACGTCCAATAGAGGAGCGATGTATCGCGACGACGTAATTGAGCTGCAA
CATATACCCCCACCGCTGCTGATGGCTGGCGGTGATGCCACTATGCACAGTGAGAAGGAG
CTTTCGCCCGACAGCCGTTATGCACTGCGATCAAGATACATGCGTTTATGCAAAGACTTC
AATAAGTACCAGCAGCATTGCCAAGGATCATCAGACCAAGACATCGGCGACTTCCACGAG
ATAGACGGAGAACAATACCAGTCTAGTTACTTGGGAAGCGAGGGTTCTCTGTACGCGGAC
GGTTTTGATGAACAGGCGGGGACAACGGTCACTTTTCCTGGCGAAGGGCAAGCAGACATT
GATTTGCTCGACGCCATTTTGCAAGAAAATGAAAGAGCGAATGGTTCTTATCACGAAAAC
TGTACAACGTACCCACATAGCCCGCCGATGCTCACCCAACCTAGGTGCCAGGTTGCCCAT
CATAACGACAGTATGGCAGGCGCTTACGTGATGCGTCAAGGTCTAAACCCAAGCAGCAAC
AACAACAACAATAGCATGTTTAACACAATAAACAAACAGGGATACAGCACAACGCGTAAC
AGTGAATCCCAAAGCGTCGTGCTAAGCTACAAAGGTTCTATTGGCGTTCGTTCATTATCT
TATGATAACAATCATAGGACAGAATGCGAAAGTAGCGTTTCGCCCGGGCCTAATACAATT
AAGACGGAGAAACCAACATCTATTCCGAGCTTCCAAGCTTGTGAAAACGATGAAAAAGTG
ACAAGTACCCTTCTACCTCCTATTTCAATGCTCTCGGGAAAATCCGGGGCTGGTTCAGTT
CATGATACTGACGGTTTTTCGGAGCCCACAGTTACCACAATGGCAAGAGACTCAACATGT
AACACAGAACAGGAAGACGGCATCTTCAAAGCTGCATCCACCGACGAATATTTCACACAG
AGCGAAACCAGCAATGTAAAAATGATCCACACCAAACGCGAATCCGAAAAATCGGAAGCA
AGCACCTCGTCTTGTATGTTCGGGCAGCGTGCGCGAGTCCAACTAAGTCGCTCCCACAGC
ATGTCTGAGGCAGGGTCCAATAATGGAACGAACGGATTTTTAAGAAGTGGTGCGGCGTCC
AGCGTTGGCTTGAAAACGTCCCTTATATCAGCAGCAATGAAATCCGCGCACACAAACACG
CGGAAACGCCGTGCCAACAGCAGCAGTCACTCTACTTCCACGTCAAAAAGCTCCACCGAT
AGAGGAAGTGTCCAGCAAGAGCCTAAGAATGCAAAACGCTTACAGAGCAATGAACGTGAA
AGGCTACGGATGCACCAACTAAACGACGCCTTTCAAGCCCTACGTGATATCTGCCCACAC
GTGAAAAGCGAACGCAAGCTCTCCAAAATGGAAACATTGACGCTAGCACACAACTACATT
GCCTCGCTAAGTAATATGATCCTCACGCTTGAGAAGTCGATTCAACCTGAGAACAGGCTA
CACAGCAACGGTCAACCTGGTAAAATAGCGATCATAAAATCCGAAGCGAACTTAATGGCT
CCGATTAACGTAAACTGCATGCCGCCGTTAACTGTACCAAACCAGACGAATGGCAATCAG
CCGCATGCTATGTAGCAGTCGCTGCCAATACAAACTTGCTAGGCTATACTGTTTTGCCCT
TCAAATCCCCAACTTGACGGCCTGTAGTAGATATATCTGTGTAAATACACACGCATATAT
ATGTTAATCTACTGTATAGCTATAGGTATATGATGTAAATGTGTATAGACTTACACTGTA
CTATTGTGAGCGCAAGACTTATTCAGACTTTCATATTGTACAATGTTTATTGTTGTTAAA
GTTGCAATAATAGGTTCCTTATTCGTCCCTATATGATCTTATTTTATACTACTCTCGTTG
CGGACATCATTTGCATATTTTTTTACTAATCTTCTACCCAGTAGTAGATTAAGTTACATT
TAATCGAAAAATGATACTTTTAATTCATACCAAACAAAGCCAAACACTGCCGGTTTGGAC
TGTGCGCACCACACGATAAATTCGCCAATTTTTAGAGTTTTTTTTTATGACCGTGCTTGT
ATTTCATTTTGTACAGTACATATTTTGCTGTGTGCTCGCCTGTGAGTGCATAATTATTTA
TTGTTTCTGTCTTACCTTTCCACAAATTGTCGCTCAGTAACCCTGTAACACAAGGTGCTG
ATCGTTTTCATTGGCTCACTATATTTAAACCAAATTATTCTATTTTTGCGTCATTCATAC
ATTGCCTGCTCTGTTGTTCTCTTTCCCCGTGATCGCAGTTACGAAGGAATTTTGAGATAG
CAAGTCAACGCGCTGCGTCATTTCCAGGGTGCCCGGCGTTTGGTTACAGTGAAATAACCT
AAGCTAGTTATACCCAGAAGTGAACCGCAAGTTGTTAAACGTTTTAACGTCGTAGATATA
TAATACACTACAAGTCACAAATAAATGATAATAACTGTCAAAAGTTATACAATACTTTTC
TTTAAATCCATTTTATGCCCTTTACTTTCGTTGCAATTTTTTTCTGCATATTTAATACGC
CCTGCCGATGGTTCCTACATTCGTACTGCTGCTTACATTGTCGCATACGATTTTTATACT
TTTTTTGAAATTGTTTGTGTGACGATTTGATTTTATCCGGACATTTTAGAGAAAGTCGGA
ATACATTTATAGATGAATTGTA
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[431-496] 1.7E-20 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[436-503] 2.88E-17 |
| CDD |
bHLH_dom (IPR011598) - T[437-495] 2.8893E-16 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[439-491] 16.082 |
| Pfam |
bHLH_dom (IPR011598) - T[440-491] 6.0E-14 |
| SMART |
bHLH_dom (IPR011598) - T[445-497] 1.8E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BHA15_HUMAN | 64.615 % | 94 | 3.65E-22 |