- Transcript 'Cisavi.CG.ENS81.R1.2...' >
- Transcript 'KH2012:KH.C3.308.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.308.v1.A.SL2-1
Possible name(s)
BHLHA15; NEUROG1; NEUROG2
Gene model
Location
KhC3 [5,367,501 / 5,370,657]
Amino acid sequence
Length: 552
>KH.C3.308.v1.A.SL2-1
YTMYGVHRHSATTSNRGAMYRDDVIELQHIPPPLLMAGGDATMHSEKELSPDSRYALRSR
YMRLCKDFNKYQQHCQGSSDQDIGDFHEIDGEQYQSSYLGSEGSLYADGFDEQAGTTVTF
PGEGQADIDLLDAILQENERANGSYHENCTTYPHSPPMLTQPRCQVAHHNDSMAGAYVMR
QGLNPSSNNNNNSMFNTINKQGYSTTRNSESQSVVLSYKGSIGVRSLSYDNNHRTECESS
VSPGPNTIKTEKPTSIPSFQACENDEKVTSTLLPPISMLSGKSGAGSVHDTDGFSEPTVT
TMARDSTCNTEQEDGIFKAASTDEYFTQSETSNVKMIHTKRESEKSEASTSSCMFGQRAR
VQLSRSHSMSEAGSNNGTNGFLRSGAASSVGLKTSLISAAMKSAHTNTRKRRANSSSHST
STSKSSTDRGSVQQEPKNAKRLQSNERERLRMHQLNDAFQALRDICPHVKSERKLSKMET
LTLAHNYIASLSNMILTLEKSIQPENRLHSNGQPGKIAIIKSEANLMAPINVNCMPPLTV
PNQTNGNQPHAM
Nucleotide sequence
Length: 2,779
>KH2012:KH.C3.308.v1.A.SL2-1
AATCACAGTTCTACATTGGTAATTATAAGATAATATACGATGTATGGTGTTCACCGCCAT
TCTGCTACTACGTCCAATAGAGGAGCGATGTATCGCGACGACGTAATTGAGCTGCAACAT
ATACCCCCACCGCTGCTGATGGCTGGCGGTGATGCCACTATGCACAGTGAGAAGGAGCTT
TCGCCCGACAGCCGTTATGCACTGCGATCAAGATACATGCGTTTATGCAAAGACTTCAAT
AAGTACCAGCAGCATTGCCAAGGATCATCAGACCAAGACATCGGCGACTTCCACGAGATA
GACGGAGAACAATACCAGTCTAGTTACTTGGGAAGCGAGGGTTCTCTGTACGCGGACGGT
TTTGATGAACAGGCGGGGACAACGGTCACTTTTCCTGGCGAAGGGCAAGCAGACATTGAT
TTGCTCGACGCCATTTTGCAAGAAAATGAAAGAGCGAATGGTTCTTATCACGAAAACTGT
ACAACGTACCCACATAGCCCGCCGATGCTCACCCAACCTAGGTGCCAGGTTGCCCATCAT
AACGACAGTATGGCAGGCGCTTACGTGATGCGTCAAGGTCTAAACCCAAGCAGCAACAAC
AACAACAATAGCATGTTTAACACAATAAACAAACAGGGATACAGCACAACGCGTAACAGT
GAATCCCAAAGCGTCGTGCTAAGCTACAAAGGTTCTATTGGCGTTCGTTCATTATCTTAT
GATAACAATCATAGGACAGAATGCGAAAGTAGCGTTTCGCCCGGGCCTAATACAATTAAG
ACGGAGAAACCAACATCTATTCCGAGCTTCCAAGCTTGTGAAAACGATGAAAAAGTGACA
AGTACCCTTCTACCTCCTATTTCAATGCTCTCGGGAAAATCCGGGGCTGGTTCAGTTCAT
GATACTGACGGTTTTTCGGAGCCCACAGTTACCACAATGGCAAGAGACTCAACATGTAAC
ACAGAACAGGAAGACGGCATCTTCAAAGCTGCATCCACCGACGAATATTTCACACAGAGC
GAAACCAGCAATGTAAAAATGATCCACACCAAACGCGAATCCGAAAAATCGGAAGCAAGC
ACCTCGTCTTGTATGTTCGGGCAGCGTGCGCGAGTCCAACTAAGTCGCTCCCACAGCATG
TCTGAGGCAGGGTCCAATAATGGAACGAACGGATTTTTAAGAAGTGGTGCGGCGTCCAGC
GTTGGCTTGAAAACGTCCCTTATATCAGCAGCAATGAAATCCGCGCACACAAACACGCGG
AAACGCCGTGCCAACAGCAGCAGTCACTCTACTTCCACGTCAAAAAGCTCCACCGATAGA
GGAAGTGTCCAGCAAGAGCCTAAGAATGCAAAACGCTTACAGAGCAATGAACGTGAAAGG
CTACGGATGCACCAACTAAACGACGCCTTTCAAGCCCTACGTGATATCTGCCCACACGTG
AAAAGCGAACGCAAGCTCTCCAAAATGGAAACATTGACGCTAGCACACAACTACATTGCC
TCGCTAAGTAATATGATCCTCACGCTTGAGAAGTCGATTCAACCTGAGAACAGGCTACAC
AGCAACGGTCAACCTGGTAAAATAGCGATCATAAAATCCGAAGCGAACTTAATGGCTCCG
ATTAACGTAAACTGCATGCCGCCGTTAACTGTACCAAACCAGACGAATGGCAATCAGCCG
CATGCTATGTAGCAGTCGCTGCCAATACAAACTTGCTAGGCTATACTGTTTTGCCCTTCA
AATCCCCAACTTGACGGCCTGTAGTAGATATATCTGTGTAAATACACACGCATATATATG
TTAATCTACTGTATAGCTATAGGTATATGATGTAAATGTGTATAGACTTACACTGTACTA
TTGTGAGCGCAAGACTTATTCAGACTTTCATATTGTACAATGTTTATTGTTGTTAAAGTT
GCAATAATAGGTTCCTTATTCGTCCCTATATGATCTTATTTTATACTACTCTCGTTGCGG
ACATCATTTGCATATTTTTTTACTAATCTTCTACCCAGTAGTAGATTAAGTTACATTTAA
TCGAAAAATGATACTTTTAATTCATACCAAACAAAGCCAAACACTGCCGGTTTGGACTGT
GCGCACCACACGATAAATTCGCCAATTTTTAGAGTTTTTTTTTATGACCGTGCTTGTATT
TCATTTTGTACAGTACATATTTTGCTGTGTGCTCGCCTGTGAGTGCATAATTATTTATTG
TTTCTGTCTTACCTTTCCACAAATTGTCGCTCAGTAACCCTGTAACACAAGGTGCTGATC
GTTTTCATTGGCTCACTATATTTAAACCAAATTATTCTATTTTTGCGTCATTCATACATT
GCCTGCTCTGTTGTTCTCTTTCCCCGTGATCGCAGTTACGAAGGAATTTTGAGATAGCAA
GTCAACGCGCTGCGTCATTTCCAGGGTGCCCGGCGTTTGGTTACAGTGAAATAACCTAAG
CTAGTTATACCCAGAAGTGAACCGCAAGTTGTTAAACGTTTTAACGTCGTAGATATATAA
TACACTACAAGTCACAAATAAATGATAATAACTGTCAAAAGTTATACAATACTTTTCTTT
AAATCCATTTTATGCCCTTTACTTTCGTTGCAATTTTTTTCTGCATATTTAATACGCCCT
GCCGATGGTTCCTACATTCGTACTGCTGCTTACATTGTCGCATACGATTTTTATACTTTT
TTTGAAATTGTTTGTGTGACGATTTGATTTTATCCGGACATTTTAGAGAAAGTCGGAATA
CATTTATAGATGAATTGTA
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[431-496] 1.7E-20 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[436-503] 2.88E-17 |
| CDD |
bHLH_dom (IPR011598) - T[437-495] 2.8893E-16 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[439-491] 16.082 |
| Pfam |
bHLH_dom (IPR011598) - T[440-491] 6.0E-14 |
| SMART |
bHLH_dom (IPR011598) - T[445-497] 1.8E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BHA15_HUMAN | 64.615 % | 94 | 3.65E-22 |