Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C3.385.v1.A.SL4-1

Possible name(s)

JMJD4; JMJD6; JMJD8

Gene model

KH2012:KH.C3.385

Location

KhC3 [348,624 / 352,908]

Sequences

Amino acid sequence

Length: 396

>KH.C3.385.v1.A.SL4-1
VSTFHFLMSNHKSRKRIRAAKKAARPELKGEEGWSGLKYQQWFDVSFSTVRDNVERVDVG
KLSCADFIEQYEKPNIPVVLLNTQNSWLANQKWTLERLKKKYRNQKFKCGEDNDGYSVKM
KMKYYIDYMRTTKDDSPLYIFDSNYGEHPKRKQLLEDFEIPNYFKDDLFRYAGEKKRPPY
RWFVMGPGLSGTGIHIDPLGTSAWNALVKGHKRWCMFPNKTPKEMIKVKRSEGLLQQDEA
ITWFKTIYPRTLSKDWPEEFKPLEILQKPGETVFVPGGWWHLVLNLDTTIAVTQNFASVT
NFPTVWPKTVKGRPKLSHKWIRILRKERPEVAAMADKISTEKYITSDSSSDSSSSSSDSS
SSSSDEDDKETRKRQMPSLTANGTSQSGKRQRTETN

Nucleotide sequence

Length: 1,442

>KH2012:KH.C3.385.v1.A.SL4-1
AGTGGGAAAAGGATTTTAGTGTTAAGTATCTACTTTTCACTTCTTAATGTCTAATCACAA
ATCTAGAAAGCGAATTAGAGCTGCTAAAAAAGCAGCAAGACCAGAGCTAAAAGGCGAAGA
AGGTTGGTCAGGTTTGAAATATCAACAATGGTTTGACGTTTCCTTTTCAACGGTAAGGGA
CAATGTTGAAAGGGTTGACGTTGGGAAGTTGTCATGTGCAGACTTTATTGAACAGTATGA
GAAACCAAATATTCCAGTAGTGCTGTTAAACACTCAAAACTCATGGCTAGCTAACCAAAA
ATGGACCCTGGAAAGACTGAAGAAAAAATATCGGAACCAAAAGTTTAAATGTGGAGAGGA
CAATGATGGATACTCTGTTAAAATGAAAATGAAATATTACATTGATTATATGAGAACCAC
GAAAGATGATAGTCCTCTTTATATATTCGATAGCAATTACGGTGAACACCCCAAACGTAA
ACAACTCTTGGAAGACTTTGAAATACCAAACTACTTCAAGGATGACCTATTCAGGTATGC
AGGGGAAAAGAAGAGGCCACCTTATAGGTGGTTTGTGATGGGTCCAGGGTTATCAGGCAC
TGGGATTCATATTGATCCATTAGGGACAAGCGCGTGGAATGCTCTTGTGAAGGGTCACAA
ACGCTGGTGTATGTTTCCAAACAAAACTCCAAAGGAGATGATAAAGGTAAAACGAAGTGA
AGGATTGTTGCAACAAGATGAAGCTATTACTTGGTTTAAAACAATCTATCCCCGAACTTT
GTCCAAGGATTGGCCTGAAGAATTTAAACCATTAGAAATATTACAAAAGCCAGGTGAAAC
AGTGTTTGTACCTGGTGGTTGGTGGCATCTTGTACTGAACCTCGACACAACTATTGCTGT
CACTCAGAATTTTGCTTCGGTAACAAATTTTCCCACTGTTTGGCCGAAAACTGTCAAGGG
CCGACCAAAACTTTCTCATAAGTGGATTAGGATATTAAGGAAAGAAAGGCCAGAAGTTGC
GGCCATGGCTGATAAAATCTCCACTGAAAAGTACATCACCTCTGACTCATCTTCTGATTC
TTCTTCATCTTCAAGCGATTCCTCTTCCAGCTCATCAGATGAAGATGATAAGGAGACACG
GAAGCGACAGATGCCCTCACTTACTGCAAATGGAACTTCCCAGTCGGGCAAGCGTCAACG
AACAGAAACAAACTAAATGCCGCTTCTCAAGGAAGTTTTGTCTCTCTGTTCCTGCCGTTC
ACAATGTGTGCTAGCCAAATCATCTGCCGCTTTTGTAATCCATGCGACTTGCTGTGAATT
ATGCAATAGTCAACTTGTGAATAAATTATGTCTCCTCATATAGCATGTCTGCGTCGTTTC
ACTTTTCAGTAAAAATTCTTAATGTGTTTTACCGTACGTTAGTTTTCTCAGTCTAGAATG
AC

InterProScan

ProSiteProfiles	JmjC_dom (IPR003347) - T[149-313] 36.011
SMART	JmjC_dom (IPR003347) - T[149-313] 1.4E-36
Pfam	JmjC_dom (IPR003347) - T[182-296] 1.2E-25

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
JMJD6_HUMAN	71.772 %	523	0
JMJD4_HUMAN	29.259 %	85.9	3.14E-18