- Transcript 'KH2012:KH.C3.491.v2....' >
- Transcript 'KH2012:KH.C3.491.v2....'
Transcript Model
Transcript Id
KH2012:KH.C3.491.v2.C.nonSL9-1
Possible name(s)
AC068533.4; CRCP; FBXO41
Gene model
Location
KhC3 [3,850,805 / 3,857,499]
Amino acid sequence
Length: 681
>KH.C3.491.v2.C.nonSL9-1
AKLYEMEVTNKCSAMLSNMEVLNILNEYANEQKLSKNKNSRNNQNLSTITYETIKYLSET
PAGLQNQACIETTLKALLPFGLTKAEKLQLVNLRPTTAVEISLIVEESEERITEEQIDEI
IEIVMYYSSEDMLPYRCPSCGSSKRFRSLVALRMHMSIIHDISTGNNGNLTNESTDLLEK
SETEGPERVKVGTIEDVPSSNAVDAIFNKYSGRMDNILGKYDRYLHNTLKTKQIANRIKM
AKQLEQIKQQKRDLNMIRTNWETVHGLSQLVEETDMLINSRPDKSSPNPPLHSTSNLSPQ
SSLPQPHTSSHAPQDDYLLRRQVDAGVALAAKYKTLAIEAEHKLQEKIEEEHHMKQFIQV
VANKERHAKKKLSELLEEILERAETAEQQLEDISSRSVYFIGPRAPKQPGVETKVATTSF
ASDRRVVLFCIFSRMRNVDLLSMALVCREWRDVARHSQLWSRIRFDNLRMEGKLLKRISE
WSSETCYLHLHNISLLPSNMDAPDTETGCLEEGLEMILKRCGDKLLVLAIDRCDPVITSR
VMWLVSCYNRKIRNIVYRSSIDPLCHQVGWSLGSACRDIVSLEVAPVQPCPVPGMFDNNV
ARLLSWCWPQLQALSFGGINIDGAGLISVGRFFKITVLVYYCLFYCNTPLMPNFYYILTL
PHHAGINNYHLFITFENHTKI
Nucleotide sequence
Length: 2,099
>KH2012:KH.C3.491.v2.C.nonSL9-1
ATGTTGATTACGTTTTTGATAAGGTCAACTTTAAAAACTTAAACGAGTGTTGAGCTAAAC
TGTACGAAATGGAAGTAACCAATAAGTGTTCTGCTATGTTAAGTAATATGGAAGTTCTGA
ACATTTTAAACGAATACGCAAACGAGCAAAAGCTGAGCAAGAACAAGAACTCAAGGAATA
ACCAGAACTTATCGACAATAACGTATGAAACAATTAAGTATCTTTCTGAGACACCAGCAG
GGTTACAGAACCAGGCGTGCATAGAAACAACTTTGAAAGCGCTTTTGCCGTTTGGTTTAA
CCAAAGCTGAAAAGCTACAGTTGGTAAACCTTCGGCCAACAACCGCAGTTGAGATCTCCC
TTATTGTGGAAGAAAGCGAAGAAAGAATCACTGAAGAGCAAATTGATGAGATTATTGAGA
TTGTCATGTACTACAGTTCAGAAGACATGCTCCCTTACCGATGTCCCTCGTGTGGCAGTT
CGAAACGCTTCCGAAGCCTCGTTGCTCTTCGTATGCACATGTCTATCATACATGACATAT
CTACAGGCAACAATGGTAACCTGACAAATGAATCAACTGACCTCTTGGAAAAAAGTGAGA
CAGAAGGACCAGAAAGAGTGAAAGTGGGAACAATAGAAGATGTACCTTCCAGCAATGCAG
TTGATGCCATCTTTAACAAGTATTCTGGCAGAATGGACAACATACTCGGAAAATATGACA
GGTATTTACATAATACACTCAAAACAAAGCAGATTGCTAATAGAATAAAGATGGCAAAGC
AACTGGAACAAATAAAACAGCAGAAGAGAGATTTAAATATGATTCGAACAAACTGGGAAA
CTGTTCATGGATTGTCTCAACTTGTTGAAGAAACTGACATGCTTATTAACTCAAGACCCG
ATAAGTCCTCTCCTAACCCTCCTCTGCATTCAACATCCAATCTAAGTCCTCAGTCGAGTC
TTCCTCAACCTCATACTTCCTCCCATGCTCCTCAAGATGATTATTTGCTCCGGAGGCAAG
TGGATGCAGGAGTTGCTCTTGCAGCCAAATACAAAACTTTAGCAATTGAAGCCGAGCATA
AACTTCAAGAAAAAATAGAAGAGGAGCATCATATGAAGCAATTCATTCAAGTTGTAGCGA
ACAAAGAACGTCATGCTAAGAAAAAACTCTCTGAATTATTAGAAGAAATTTTGGAACGTG
CTGAGACAGCTGAACAACAACTTGAGGACATCTCCAGTAGATCCGTTTATTTTATCGGTC
CTCGAGCCCCCAAGCAGCCAGGAGTTGAAACGAAAGTGGCCACCACGAGTTTTGCTTCTG
ATCGTCGAGTTGTACTTTTTTGTATTTTTTCACGAATGAGAAACGTCGACTTGCTCTCTA
TGGCCCTCGTGTGTCGGGAATGGCGAGACGTAGCGAGACATTCTCAACTTTGGAGTCGAA
TTCGTTTTGACAATCTTCGTATGGAAGGGAAGCTACTGAAGAGAATATCAGAATGGTCAT
CGGAAACTTGTTACCTTCACTTACACAACATAAGTCTTCTGCCTTCTAACATGGATGCTC
CAGATACAGAAACAGGTTGTTTGGAGGAAGGGTTAGAGATGATCCTTAAAAGATGCGGAG
ACAAACTCCTCGTGCTGGCGATCGATAGATGCGACCCGGTGATCACAAGTCGAGTGATGT
GGCTCGTTAGTTGTTACAATCGCAAAATTCGAAATATTGTTTATCGAAGTTCGATCGACC
CTCTTTGCCACCAGGTGGGGTGGTCGCTCGGTTCTGCTTGTCGGGATATCGTGTCACTTG
AGGTCGCCCCAGTACAACCATGCCCAGTTCCAGGTATGTTTGACAACAACGTGGCTCGCT
TGCTAAGTTGGTGTTGGCCACAGTTACAAGCATTAAGTTTTGGGGGAATTAATATTGATG
GGGCAGGTCTTATATCTGTTGGTAGGTTTTTTAAAATTACTGTGTTGGTTTATTACTGTT
TATTTTATTGCAATACACCTTTAATGCCTAATTTTTATTATATACTGACATTGCCCCACC
ATGCGGGGATAAATAATTACCATTTATTCATTACTTTTGAAAACCACACTAAAATCTGA
| Gene3D |
Rpb4/RPC9_sf (IPR038324) - T[2-127] 3.1E-34 |
| SMART |
RNA_pol_II_Rpb4_core (IPR006590) - T[6-131] 1.3E-28 |
| SUPERFAMILY |
HRDC-like_sf (IPR010997) - T[13-126] 1.05E-26 |
| Pfam |
RNA_pol_II_Rpb4 (IPR005574) - T[15-125] 5.7E-26 |
| SMART |
Znf_C2H2_type (IPR013087) - T[135-160] 0.0093 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[417-463] 9.021 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[425-661] 1.0E-13 |
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[427-467] 4.19E-8 |
| Pfam |
F-box_dom (IPR001810) - T[427-465] 8.0E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBX41_HUMAN | 41.509 % | 189 | 9.33E-51 |
| RPC9_HUMAN | 49.324 % | 95.9 | 3.98E-23 |